Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0171
(437 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 94 5e-20
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 94 5e-20
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 94 5e-20
AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute (pl... 93 6e-20
AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute (pl... 93 6e-20
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 84 5e-17
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 84 5e-17
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 84 5e-17
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 84 5e-17
Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical pr... 66 1e-11
U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical pr... 66 1e-11
U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical pr... 66 1e-11
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 64 6e-11
Z71266-1|CAA95839.1| 945|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical pr... 56 9e-09
AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interfere... 56 9e-09
U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily ass... 55 2e-08
AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical... 55 3e-08
U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical pr... 52 1e-07
Z73906-6|CAA98113.1| 824|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U61955-9|AAC24409.3| 371|Caenorhabditis elegans Hypothetical pr... 45 2e-05
AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical ... 45 2e-05
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 45 2e-05
Z82085-7|CAB04988.1| 185|Caenorhabditis elegans Hypothetical pr... 44 4e-05
Z81556-1|CAB04524.1| 965|Caenorhabditis elegans Hypothetical pr... 44 4e-05
Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical pr... 44 4e-05
AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical ... 43 1e-04
AF000265-2|AAO38667.1| 887|Caenorhabditis elegans Paz/piwi doma... 43 1e-04
AF000265-1|AAB52946.2| 913|Caenorhabditis elegans Paz/piwi doma... 43 1e-04
AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical ... 42 1e-04
AC024800-5|AAF60724.1| 966|Caenorhabditis elegans Hypothetical ... 40 8e-04
Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical pr... 39 0.001
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 3.4
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical protein
F48F7.1 protein.
Length = 1002
Score = 93.9 bits (223), Expect = 5e-20
Identities = 52/118 (44%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNAR----FNVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + FI VQKRHHTR F + +N+ PGT VD I HP E DFYL S+ I+G
Sbjct: 842 QPGITFIAVQKRHHTRLFAVDKKDQVGKAYNIPPGTTVDVGITHPTEFDFYLCSHAGIQG 901
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAIC-TRVVC-RAVSYPTPTYYAHLACLRAR 376
T+RP+ YH + +D +C T V C R+VS P P YYAHL RAR
Sbjct: 902 TSRPSHYHVLWDDNNLTADELQQLTY--QMCHTYVRCTRSVSIPAPAYYAHLVAFRAR 957
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical protein
F48F7.1 protein.
Length = 1002
Score = 93.9 bits (223), Expect = 5e-20
Identities = 52/118 (44%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNAR----FNVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + FI VQKRHHTR F + +N+ PGT VD I HP E DFYL S+ I+G
Sbjct: 842 QPGITFIAVQKRHHTRLFAVDKKDQVGKAYNIPPGTTVDVGITHPTEFDFYLCSHAGIQG 901
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAIC-TRVVC-RAVSYPTPTYYAHLACLRAR 376
T+RP+ YH + +D +C T V C R+VS P P YYAHL RAR
Sbjct: 902 TSRPSHYHVLWDDNNLTADELQQLTY--QMCHTYVRCTRSVSIPAPAYYAHLVAFRAR 957
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 93.9 bits (223), Expect = 5e-20
Identities = 52/118 (44%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNAR----FNVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + FI VQKRHHTR F + +N+ PGT VD I HP E DFYL S+ I+G
Sbjct: 850 QPGITFIAVQKRHHTRLFAVDKKDQVGKAYNIPPGTTVDVGITHPTEFDFYLCSHAGIQG 909
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAIC-TRVVC-RAVSYPTPTYYAHLACLRAR 376
T+RP+ YH + +D +C T V C R+VS P P YYAHL RAR
Sbjct: 910 TSRPSHYHVLWDDNNLTADELQQLTY--QMCHTYVRCTRSVSIPAPAYYAHLVAFRAR 965
>AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform b protein.
Length = 891
Score = 93.5 bits (222), Expect = 6e-20
Identities = 52/118 (44%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGN----NARFNVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + FI VQKRHHTR F FN+ PGT VD I HP E DF+L S+ I+G
Sbjct: 729 QPGITFIAVQKRHHTRLFAADKADQVGKAFNIPPGTTVDVGITHPTEFDFFLCSHAGIQG 788
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAIC-TRVVC-RAVSYPTPTYYAHLACLRAR 376
T+RP+ YH + +D +C T V C R+VS P P YYAHL RAR
Sbjct: 789 TSRPSHYHVLWDDNDLTADELQQLTY--QMCHTYVRCTRSVSIPAPAYYAHLVAFRAR 844
>AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform a protein.
Length = 910
Score = 93.5 bits (222), Expect = 6e-20
Identities = 52/118 (44%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGN----NARFNVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + FI VQKRHHTR F FN+ PGT VD I HP E DF+L S+ I+G
Sbjct: 748 QPGITFIAVQKRHHTRLFAADKADQVGKAFNIPPGTTVDVGITHPTEFDFFLCSHAGIQG 807
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAIC-TRVVC-RAVSYPTPTYYAHLACLRAR 376
T+RP+ YH + +D +C T V C R+VS P P YYAHL RAR
Sbjct: 808 TSRPSHYHVLWDDNDLTADELQQLTY--QMCHTYVRCTRSVSIPAPAYYAHLVAFRAR 863
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical protein
ZK757.3b protein.
Length = 1037
Score = 84.6 bits (200), Expect = 3e-17
Identities = 46/116 (39%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNARF----NVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + +I+VQKRHH R F N NV PGT VD IV P DFYL S+ ++G
Sbjct: 844 RPPITYIVVQKRHHARIFCKYQNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQG 903
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACLRAR 376
T+RP RYH + ++ R+VS PTP YYA L RAR
Sbjct: 904 TSRPARYHVLLDECKFTADEIQSITYGMCHTYGRCTRSVSIPTPVYYADLVATRAR 959
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical protein
ZK757.3a protein.
Length = 1040
Score = 84.6 bits (200), Expect = 3e-17
Identities = 46/116 (39%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNARF----NVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + +I+VQKRHH R F N NV PGT VD IV P DFYL S+ ++G
Sbjct: 847 RPPITYIVVQKRHHARIFCKYQNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQG 906
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACLRAR 376
T+RP RYH + ++ R+VS PTP YYA L RAR
Sbjct: 907 TSRPARYHVLLDECKFTADEIQSITYGMCHTYGRCTRSVSIPTPVYYADLVATRAR 962
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical protein
ZK757.3b protein.
Length = 1037
Score = 84.6 bits (200), Expect = 3e-17
Identities = 46/116 (39%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNARF----NVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + +I+VQKRHH R F N NV PGT VD IV P DFYL S+ ++G
Sbjct: 844 RPPITYIVVQKRHHARIFCKYQNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQG 903
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACLRAR 376
T+RP RYH + ++ R+VS PTP YYA L RAR
Sbjct: 904 TSRPARYHVLLDECKFTADEIQSITYGMCHTYGRCTRSVSIPTPVYYADLVATRAR 959
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical protein
ZK757.3a protein.
Length = 1040
Score = 84.6 bits (200), Expect = 3e-17
Identities = 46/116 (39%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNARF----NVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + +I+VQKRHH R F N NV PGT VD IV P DFYL S+ ++G
Sbjct: 847 RPPITYIVVQKRHHARIFCKYQNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQG 906
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACLRAR 376
T+RP RYH + ++ R+VS PTP YYA L RAR
Sbjct: 907 TSRPARYHVLLDECKFTADEIQSITYGMCHTYGRCTRSVSIPTPVYYADLVATRAR 962
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical protein
T22B3.2b protein.
Length = 1035
Score = 83.8 bits (198), Expect = 5e-17
Identities = 46/116 (39%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNARF----NVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + +I+VQKRHH R F N NV PGT VD IV P DFYL S+ ++G
Sbjct: 842 RPPITYIVVQKRHHARIFCKFPNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQG 901
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACLRAR 376
T+RP RYH + ++ R+VS PTP YYA L RAR
Sbjct: 902 TSRPARYHVLLDECKFTADEIQNITYGMCHTYGRCTRSVSIPTPVYYADLVATRAR 957
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical protein
T22B3.2a protein.
Length = 1032
Score = 83.8 bits (198), Expect = 5e-17
Identities = 46/116 (39%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNARF----NVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + +I+VQKRHH R F N NV PGT VD IV P DFYL S+ ++G
Sbjct: 839 RPPITYIVVQKRHHARIFCKFPNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQG 898
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACLRAR 376
T+RP RYH + ++ R+VS PTP YYA L RAR
Sbjct: 899 TSRPARYHVLLDECKFTADEIQNITYGMCHTYGRCTRSVSIPTPVYYADLVATRAR 954
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical protein
T22B3.2b protein.
Length = 1035
Score = 83.8 bits (198), Expect = 5e-17
Identities = 46/116 (39%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNARF----NVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + +I+VQKRHH R F N NV PGT VD IV P DFYL S+ ++G
Sbjct: 842 RPPITYIVVQKRHHARIFCKFPNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQG 901
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACLRAR 376
T+RP RYH + ++ R+VS PTP YYA L RAR
Sbjct: 902 TSRPARYHVLLDECKFTADEIQNITYGMCHTYGRCTRSVSIPTPVYYADLVATRAR 957
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical protein
T22B3.2a protein.
Length = 1032
Score = 83.8 bits (198), Expect = 5e-17
Identities = 46/116 (39%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNARF----NVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + +I+VQKRHH R F N NV PGT VD IV P DFYL S+ ++G
Sbjct: 839 RPPITYIVVQKRHHARIFCKFPNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQG 898
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACLRAR 376
T+RP RYH + ++ R+VS PTP YYA L RAR
Sbjct: 899 TSRPARYHVLLDECKFTADEIQNITYGMCHTYGRCTRSVSIPTPVYYADLVATRAR 954
>Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical protein
T23D8.7 protein.
Length = 898
Score = 65.7 bits (153), Expect = 1e-11
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNARF----NVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P + FI + HHTR F R NV GT+V+ I +FYL S+ I+G
Sbjct: 763 QPGITFIGLDVTHHTRLFAANEKDRVGNSQNVPAGTLVETGITVNNLFEFYLVSHAGIQG 822
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACLRARSLTY 388
T+RPT+Y + +D R+VS P+P YYA L RA+ L
Sbjct: 823 TSRPTKYVVMWDDNSIPSADIHEMTYQLCHTQSRCTRSVSIPSPVYYAKLVAQRAKILMA 882
Query: 389 GEIFN 403
E F+
Sbjct: 883 DENFD 887
>U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical protein
F20D12.1b protein.
Length = 867
Score = 65.7 bits (153), Expect = 1e-11
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Frame = +2
Query: 44 PEVLFILVQKRHHTRFFLPG---NNARFNVYPGTVVDRDIVHPRELDFYLESYQAIKGTA 214
P+VL I+V+KRHHTRF+ G N N P T V DI + ++++++ ++GTA
Sbjct: 716 PKVLAIVVKKRHHTRFYAKGGHHGNMPINPLPDTSVGGDIAEYGKRQIFIQAFRPVQGTA 775
Query: 215 RPTRYHAVCNDGXXXXXXXXXXXXXCAICT--RVVCRAVSYPTPTYYAHLACLRARSLTY 388
+ + + +D CA+C+ ++V S PTP Y AH R L
Sbjct: 776 KVPSFLVIRDD--EEVSDEHVAKMVCAVCSLHQLVNSPTSIPTPVYVAHELAKRGTGLYK 833
Query: 389 GEIFNNNDL 415
F N +L
Sbjct: 834 AYRFKNGEL 842
>U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical protein
F20D12.1a protein.
Length = 1030
Score = 65.7 bits (153), Expect = 1e-11
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Frame = +2
Query: 44 PEVLFILVQKRHHTRFFLPG---NNARFNVYPGTVVDRDIVHPRELDFYLESYQAIKGTA 214
P+VL I+V+KRHHTRF+ G N N P T V DI + ++++++ ++GTA
Sbjct: 879 PKVLAIVVKKRHHTRFYAKGGHHGNMPINPLPDTSVGGDIAEYGKRQIFIQAFRPVQGTA 938
Query: 215 RPTRYHAVCNDGXXXXXXXXXXXXXCAICT--RVVCRAVSYPTPTYYAHLACLRARSLTY 388
+ + + +D CA+C+ ++V S PTP Y AH R L
Sbjct: 939 KVPSFLVIRDD--EEVSDEHVAKMVCAVCSLHQLVNSPTSIPTPVYVAHELAKRGTGLYK 996
Query: 389 GEIFNNNDL 415
F N +L
Sbjct: 997 AYRFKNGEL 1005
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 63.7 bits (148), Expect = 6e-11
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPG-----NNARFNVYPGTVVDRDIVHPRELDFYLESYQAIK 205
+P + +I+V KRHHT+FFL + +NV PGT+++ + + DF+L + +
Sbjct: 960 QPSITYIVVTKRHHTQFFLEDPSQGYESQGYNVLPGTLIEDAVTTNKYYDFFLSTQIGNE 1019
Query: 206 GTARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRA---VSYPTPTYYAHLACLRAR 376
G RPT Y+ V +D A+ T CR+ V+ P P YAHLA RA+
Sbjct: 1020 GCFRPTHYY-VLHDTWTGKPDSFWPTVTHAL-TYNFCRSTTTVALPAPVLYAHLAAKRAK 1077
Query: 377 SLTYG 391
G
Sbjct: 1078 ETLDG 1082
>Z71266-1|CAA95839.1| 945|Caenorhabditis elegans Hypothetical protein
R06C7.1 protein.
Length = 945
Score = 57.6 bits (133), Expect = 4e-09
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Frame = +2
Query: 23 VAGLNAKPEVLFILVQKRHHTRFFLP-----GNNARFNVYPGTVVDRDIVHPRELDFYLE 187
+ G + + +++FI+V K H RFF G N+ PG V+D + +P F+L
Sbjct: 780 IHGYSKEIKLIFIVVTKEHSYRFFRDQLRSGGKATEMNIPPGIVLDNAVTNPACKQFFLN 839
Query: 188 SYQAIKGTARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACL 367
+ ++GTA+ Y + +D ++V + S PTP Y A+
Sbjct: 840 GHTTLQGTAKTPLYTVLADDCKAPMDRLEELTFTLCHHHQIVSLSTSIPTPLYVANEYAK 899
Query: 368 RARSLTYGEIFNNNDLE 418
R R L +GE+ +E
Sbjct: 900 RGRDL-WGELTTKGPIE 915
>Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical protein
K08H10.7 protein.
Length = 1020
Score = 56.4 bits (130), Expect = 9e-09
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +2
Query: 119 NVYPGTVVDRDIVHPRELDFYLESYQAIKGTARPTRYHAVCNDGXXXXXXXXXXXXXCAI 298
N GT VD+ IV + DF+L S+ + GT+RP Y + +D A
Sbjct: 896 NPSSGTTVDKLIVSKYKFDFFLASHHGVLGTSRPGHYTVMYDDKGMSQDEVYKMTYGLAF 955
Query: 299 CTRVVCRAVSYPTPTYYAHLACLRARSL--TYGE 394
+ + +S P P +YAHL+C +A+ L TY E
Sbjct: 956 LSARCRKPISLPVPVHYAHLSCEKAKELYRTYKE 989
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 29 GLNAKPEVLFILVQKRHHTR 88
G + +P+ FI++QKRH+TR
Sbjct: 832 GEDPEPKYTFIVIQKRHNTR 851
>AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interference
promoting factorRDE-1 protein.
Length = 1020
Score = 56.4 bits (130), Expect = 9e-09
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +2
Query: 119 NVYPGTVVDRDIVHPRELDFYLESYQAIKGTARPTRYHAVCNDGXXXXXXXXXXXXXCAI 298
N GT VD+ IV + DF+L S+ + GT+RP Y + +D A
Sbjct: 896 NPSSGTTVDKLIVSKYKFDFFLASHHGVLGTSRPGHYTVMYDDKGMSQDEVYKMTYGLAF 955
Query: 299 CTRVVCRAVSYPTPTYYAHLACLRARSL--TYGE 394
+ + +S P P +YAHL+C +A+ L TY E
Sbjct: 956 LSARCRKPISLPVPVHYAHLSCEKAKELYRTYKE 989
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 29 GLNAKPEVLFILVQKRHHTR 88
G + +P+ FI++QKRH+TR
Sbjct: 832 GEDPEPKYTFIVIQKRHNTR 851
>U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily
assigned gene nameprotein 292 protein.
Length = 722
Score = 55.2 bits (127), Expect = 2e-08
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNAR--FNVYPGTVVDRDIVHPRELDFYLESYQAIKGTA 214
K ++ FI+V KR + R G++++ N PGTVVD + P +DFYL +GT
Sbjct: 591 KIKLAFIIVTKRVNMRILKQGSSSKSAINPQPGTVVDTTVTRPERMDFYLVPQFVNQGTV 650
Query: 215 RPTRYHAVCND-GXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAH-LACLRARSL 382
P Y+ + +D G C + V P P YAH LA L A+SL
Sbjct: 651 TPVSYNIIHDDTGLGPDKHQQLAFKLCHLYYNWQ-GTVRVPAPCQYAHKLAFLTAQSL 707
>AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical
protein F55A12.1 protein.
Length = 892
Score = 54.8 bits (126), Expect = 3e-08
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Frame = +2
Query: 23 VAGLNAKPEVLFILVQKRHHTRFFLP-----GNNARFNVYPGTVVDRDIVHPRELDFYLE 187
+ G + ++++I+V K H+ RFF G N+ PG V+D + +P F+L
Sbjct: 727 IHGYSKDIKLIYIVVTKEHNYRFFRDQLRSGGKATEMNIPPGIVLDNAVTNPACKQFFLN 786
Query: 188 SYQAIKGTARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACL 367
+ ++GTA+ Y + +D ++V + S PTP Y A+
Sbjct: 787 GHTTLQGTAKTPLYTVLADDCAAPMDRLEELTFTLCHYHQIVALSTSIPTPLYVANEYAK 846
Query: 368 RARSLTYGE 394
R R L +GE
Sbjct: 847 RGRDL-WGE 854
>U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical
protein ZK1248.7 protein.
Length = 363
Score = 52.4 bits (120), Expect = 1e-07
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Frame = +2
Query: 23 VAGLNAKPEVLFILVQKRHHTRFFLP-----GNNARFNVYPGTVVDRDIVHPRELDFYLE 187
+ G + +++I+V K H RFF G N+ PG V+D + +P F+L
Sbjct: 224 IQGYSKDINLIYIIVTKEHSYRFFRDQLRSGGKATEMNIPPGIVLDSAVTNPACKQFFLN 283
Query: 188 SYQAIKGTARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACL 367
+ ++GTA+ Y + +D ++V + S PTP Y A+
Sbjct: 284 GHTTLQGTAKTPLYTILADDCNAPMDRLEELTYTLCHHHQIVALSTSIPTPLYVANEYAK 343
Query: 368 RARSL 382
R R L
Sbjct: 344 RGRDL 348
>Z73906-6|CAA98113.1| 824|Caenorhabditis elegans Hypothetical protein
D2030.6 protein.
Length = 824
Score = 51.6 bits (118), Expect = 2e-07
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 3/117 (2%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNA--RFNVYPGTVVDRDIVHPRELDFYLESYQAIKGTA 214
K ++ FI+V KR + R G++ N PGTVVD + P +DFYL +GT
Sbjct: 693 KIKLAFIIVTKRVNMRILKQGSSLDNAINPQPGTVVDTTVTRPERMDFYLVPQFVNQGTV 752
Query: 215 RPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAH-LACLRARSL 382
P Y+ + +D V P P YAH LA L A+SL
Sbjct: 753 TPVSYNIIHDDTDLGPDKHQQLAFKLCHLYYNWQGTVRVPAPCQYAHKLAFLTAQSL 809
>U61955-9|AAC24409.3| 371|Caenorhabditis elegans Hypothetical
protein M03D4.6 protein.
Length = 371
Score = 45.2 bits (102), Expect = 2e-05
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = +2
Query: 20 RVAGLNAKPEVLFILVQKRHHTRFFLPGNNARF-NVYPGTVVDRDIVHPRELDFYLESYQ 196
+ G P++ I+ K H TR + G + N+ PGT+VD IV P F+
Sbjct: 214 KTLGEKYSPQLTIIVGSKGHSTRLYARGERDQISNLQPGTIVDSVIVSPDYNKFFHCGAV 273
Query: 197 AIKGTARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTY 346
A +GT + T+Y + + C + +V VS P P Y
Sbjct: 274 ARQGTCKATKYTVLYPESPKMEWIQRMTNDLCYM-HEIVFHPVSLPAPLY 322
>AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical
protein K12B6.1 protein.
Length = 881
Score = 45.2 bits (102), Expect = 2e-05
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFFLPGNNARF-NVYPGTVVDRDIVHPRELDFYLESYQAIKGTAR 217
+P + IL K H+TR + N NV PGTV+D IV P ++Y A +GT++
Sbjct: 730 RPHITLILASKVHNTRVYKSENGGGVCNVEPGTVIDHTIVSPVLSEWYHAGSLARQGTSK 789
Query: 218 PTRYHAVCN 244
+Y + N
Sbjct: 790 LVKYSLIFN 798
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 45.2 bits (102), Expect = 2e-05
Identities = 26/99 (26%), Positives = 44/99 (44%)
Frame = +2
Query: 119 NVYPGTVVDRDIVHPRELDFYLESYQAIKGTARPTRYHAVCNDGXXXXXXXXXXXXXCAI 298
N+ PG VD + +P F+L S+ ++G+A+ Y + +D
Sbjct: 845 NIGPGLTVDYGVTNPACKQFFLNSHMTLQGSAKTPLYTVLADDRNIGMSALEEFTFNLCH 904
Query: 299 CTRVVCRAVSYPTPTYYAHLACLRARSLTYGEIFNNNDL 415
++V S PTP Y A+ R R+L + E N N++
Sbjct: 905 LHQIVGLPTSIPTPLYVANEYAKRGRNL-WNEAINANEI 942
>Z82085-7|CAB04988.1| 185|Caenorhabditis elegans Hypothetical
protein ZK218.8 protein.
Length = 185
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +2
Query: 131 GTVVDRDIVHPRELDFYLESYQAIKGTARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRV 310
GTVVD+ +V + DFYL S+ A+ GT+RP Y + +D A +
Sbjct: 103 GTVVDKLVVSGYKFDFYLNSHHAVLGTSRPAHYTVMYDDMGMSQDEVYKMTDALAFLSAR 162
Query: 311 VCRAVSYPTPTYY 349
+ +S P P ++
Sbjct: 163 CRKPISLPAPVHF 175
>Z81556-1|CAB04524.1| 965|Caenorhabditis elegans Hypothetical protein
F58G1.1 protein.
Length = 965
Score = 44.4 bits (100), Expect = 4e-05
Identities = 26/97 (26%), Positives = 42/97 (43%)
Frame = +2
Query: 119 NVYPGTVVDRDIVHPRELDFYLESYQAIKGTARPTRYHAVCNDGXXXXXXXXXXXXXCAI 298
N+ PG +VD + +P F+L S+ ++GTA+ Y + +D
Sbjct: 835 NIAPGILVDSIVTNPACKQFFLNSHITLQGTAKTPLYTVLADDAKVSMTALEDITYKLCH 894
Query: 299 CTRVVCRAVSYPTPTYYAHLACLRARSLTYGEIFNNN 409
++V S PTP Y A+ R R+L + NN
Sbjct: 895 LHQIVGLPTSLPTPLYVANEYAKRGRNLWNEAVALNN 931
>Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical protein
C04F12.1 protein.
Length = 944
Score = 44.4 bits (100), Expect = 4e-05
Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 1/125 (0%)
Frame = +2
Query: 44 PEVLFILVQKRHHTRFFLPGNNARFNVYPGTVVDRDIVHPRELDFYLESYQAIKGTARPT 223
P ++V KRH R + N NV P T +D+ IV + + S+ + GTA+P
Sbjct: 787 PSFALLVVTKRHANRLLIKDQNGYTNVPPLTAIDQTIVKKQGNEVIFVSHCPLNGTAQPI 846
Query: 224 RYHAVCNDGXXXXXXXXXXXXXCAICT-RVVCRAVSYPTPTYYAHLACLRARSLTYGEIF 400
+ + NDG C + VS P Y A R L
Sbjct: 847 VINTLVNDGIFKTNDQLVQFITALCCAHQKSTNIVSLPESIYAADEYAKRGADLFQSYKL 906
Query: 401 NNNDL 415
+ DL
Sbjct: 907 KHRDL 911
>AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical
protein F56A6.1a protein.
Length = 887
Score = 42.7 bits (96), Expect = 1e-04
Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 7/143 (4%)
Frame = +2
Query: 11 AYQRVAGLNAKPEVLFILVQKRHHTRFFLPGNNARFNVYPGTVVDRDIVHPRELDFYLES 190
A+Q+ +P + I K H+ R + N+ PGTVVD IV ++Y S
Sbjct: 723 AFQKEGTPPFRPHITIIASSKAHNERLYKSDKGRIVNLEPGTVVDHTIVSNVYTEWYHAS 782
Query: 191 YQAIKGTARPTRYHAV--CNDGXXXXXXXXXXXXXCAIC--TRVVCRAVSYPTPTYYAHL 358
A +GTA+ T++ + G +C ++V V P P Y A
Sbjct: 783 AVARQGTAKATKFTLIFTTKAGPQAEPLWHLEQLTNDLCYDHQIVFHPVGLPVPLYIADR 842
Query: 359 ACLRAR---SLTYGEIFNNNDLE 418
R + G I+N ++
Sbjct: 843 YSQRGAMVLAANQGPIYNEGQID 865
>AF000265-2|AAO38667.1| 887|Caenorhabditis elegans Paz/piwi
domain-containing protein1, isoform c protein.
Length = 887
Score = 42.7 bits (96), Expect = 1e-04
Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 7/143 (4%)
Frame = +2
Query: 11 AYQRVAGLNAKPEVLFILVQKRHHTRFFLPGNNARFNVYPGTVVDRDIVHPRELDFYLES 190
A+Q+ +P + I K H+ R + N+ PGTVVD IV ++Y S
Sbjct: 723 AFQKEGTPPFRPHITIIASSKAHNERLYKSDKGRIVNLEPGTVVDHTIVSNVYTEWYHAS 782
Query: 191 YQAIKGTARPTRYHAV--CNDGXXXXXXXXXXXXXCAIC--TRVVCRAVSYPTPTYYAHL 358
A +GTA+ T++ + G +C ++V V P P Y A
Sbjct: 783 AVARQGTAKATKFTLIFTTKAGPQAEPLWHLEQLTNDLCYDHQIVFHPVGLPVPLYIADR 842
Query: 359 ACLRAR---SLTYGEIFNNNDLE 418
R + G I+N ++
Sbjct: 843 YSQRGAMVLAANQGPIYNEGQID 865
>AF000265-1|AAB52946.2| 913|Caenorhabditis elegans Paz/piwi
domain-containing protein1, isoform a protein.
Length = 913
Score = 42.7 bits (96), Expect = 1e-04
Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 7/143 (4%)
Frame = +2
Query: 11 AYQRVAGLNAKPEVLFILVQKRHHTRFFLPGNNARFNVYPGTVVDRDIVHPRELDFYLES 190
A+Q+ +P + I K H+ R + N+ PGTVVD IV ++Y S
Sbjct: 749 AFQKEGTPPFRPHITIIASSKAHNERLYKSDKGRIVNLEPGTVVDHTIVSNVYTEWYHAS 808
Query: 191 YQAIKGTARPTRYHAV--CNDGXXXXXXXXXXXXXCAIC--TRVVCRAVSYPTPTYYAHL 358
A +GTA+ T++ + G +C ++V V P P Y A
Sbjct: 809 AVARQGTAKATKFTLIFTTKAGPQAEPLWHLEQLTNDLCYDHQIVFHPVGLPVPLYIADR 868
Query: 359 ACLRAR---SLTYGEIFNNNDLE 418
R + G I+N ++
Sbjct: 869 YSQRGAMVLAANQGPIYNEGQID 891
>AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical
protein F56A6.1b protein.
Length = 856
Score = 42.3 bits (95), Expect = 1e-04
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 11 AYQRVAGLNAKPEVLFILVQKRHHTRFFLPGNNARFNVYPGTVVDRDIVHPRELDFYLES 190
A+Q+ +P + I K H+ R + N+ PGTVVD IV ++Y S
Sbjct: 723 AFQKEGTPPFRPHITIIASSKAHNERLYKSDKGRIVNLEPGTVVDHTIVSNVYTEWYHAS 782
Query: 191 YQAIKGTARPTRY 229
A +GTA+ T++
Sbjct: 783 AVARQGTAKATKF 795
>AC024800-5|AAF60724.1| 966|Caenorhabditis elegans Hypothetical
protein Y49F6A.1 protein.
Length = 966
Score = 39.9 bits (89), Expect = 8e-04
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFF----LPGNNA-RFNVYPGTVVDRDIVHPRELDFYLESYQAIK 205
KP ++ I+ K H R F G+ A + NV GT +D I +F L S A+
Sbjct: 791 KPSLVVIVANKTSHLRVFPVEIREGDTAMKQNVRSGTCLDGKITSAGREEFVLISQTALI 850
Query: 206 GTARPTRYHAVCND 247
TA+PT+Y ND
Sbjct: 851 STAKPTKYTIAAND 864
>Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical protein
C16C10.3 protein.
Length = 1032
Score = 39.1 bits (87), Expect = 0.001
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 4/117 (3%)
Frame = +2
Query: 41 KPEVLFILVQKRHHTRFF---LPGNNARF-NVYPGTVVDRDIVHPRELDFYLESYQAIKG 208
+P ++ I+ Q+ H R F + GN A N+ GT V+ + +F L S + G
Sbjct: 858 RPHLVVIIAQRASHARVFPSCISGNRATDQNIPSGTCVENVLTSYGYDEFILSSQTPLIG 917
Query: 209 TARPTRYHAVCNDGXXXXXXXXXXXXXCAICTRVVCRAVSYPTPTYYAHLACLRARS 379
T RP +Y + ND A +V + S P Y A R R+
Sbjct: 918 TVRPCKYTILVNDAKWSKNELMHLTYFRAFGHQVSYQPPSVPDVLYAAENLAKRGRN 974
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 208 ALDRLVRLQIEVQFTWMYYITVDHSPRIDVETGVVPGQEESRVMTFLYKNEQ 53
A+DRL++L E+ + Y+T D P +D ++ G RV ++K Q
Sbjct: 358 AIDRLIKLYKEMVYQMKGYLTKDGIPELDRVEMIMKGL--GRVEDEIFKRRQ 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,207,621
Number of Sequences: 27780
Number of extensions: 198900
Number of successful extensions: 498
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -