Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0170
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 36 0.11
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 36 0.11
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 36 0.11
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 36 0.11
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 36 0.11
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 36 0.11
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 36 0.11
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 36 0.11
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 36 0.11
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 36 0.11
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 36 0.11
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 36 0.11
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 36 0.11
AK126213-1|BAC86488.1| 262|Homo sapiens protein ( Homo sapiens ... 32 2.3
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 246 VHESDHYCPNCNAYIGTYTR 305
+ + DHYCPNC A +GTY R
Sbjct: 141 LQDVDHYCPNCRALLGTYKR 160
>AK126213-1|BAC86488.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ44225 fis, clone THYMU3006168. ).
Length = 262
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/95 (18%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 195 VFVHVFALRMSAILHGLVHESDHYCPNCNAYIGTYTR----*FHNCERIAYSCMPFDDLH 362
V++H+ M +H + C + + Y+ +Y R + + AY C+ F H
Sbjct: 58 VYIHIIYTYMYIHMHAYAYMCVFICTHMHTYVYSYARVCIHMYIHIHAYAYICI-FIYTH 116
Query: 363 LYSFVFIFHIHMINLKFGLMLYSSVEYILQLHLKA 467
++++V+ + I++ + Y+ + + H++A
Sbjct: 117 MHTYVYSYARICIHMYIHIHAYACICMFMYAHMRA 151
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,853,624
Number of Sequences: 237096
Number of extensions: 1989317
Number of successful extensions: 4093
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4081
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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