Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0169
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein comple... 133 6e-31
AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop ... 133 6e-31
AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein. 133 6e-31
BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein. 128 2e-29
BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein. 128 2e-29
AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP... 128 2e-29
AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protei... 128 2e-29
AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein. 128 2e-29
AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens ... 121 2e-27
BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein... 41 0.004
AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein... 41 0.004
AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein... 41 0.004
AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex be... 41 0.004
AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein... 41 0.004
U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subun... 33 0.63
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 33 0.63
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 33 0.63
AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein... 33 0.63
U72395-1|AAB68948.1| 890|Homo sapiens MIP protein. 33 1.1
U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein. 33 1.1
U70322-1|AAC50723.1| 890|Homo sapiens transportin protein. 33 1.1
U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein. 33 1.1
BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein... 33 1.1
BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein. 33 1.1
AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B sub... 33 1.1
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 32 1.9
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 32 1.9
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 32 1.9
BC037248-1|AAH37248.1| 342|Homo sapiens family with sequence si... 30 5.8
AF367470-1|AAK53406.1| 344|Homo sapiens testes development-rela... 30 5.8
BC021297-1|AAH21297.1| 832|Homo sapiens DYNC1H1 protein protein. 30 7.7
AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, he... 30 7.7
AK093161-1|BAC04080.1| 243|Homo sapiens protein ( Homo sapiens ... 30 7.7
AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein. 30 7.7
>BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein complex,
subunit gamma protein.
Length = 874
Score = 133 bits (321), Expect = 6e-31
Identities = 65/84 (77%), Positives = 72/84 (85%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRA 434
+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RA
Sbjct: 68 EAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRA 127
Query: 435 LCSITDSTMLQAIERYMKQAIVDK 506
LC ITDSTMLQAIERYMKQAIVDK
Sbjct: 128 LCQITDSTMLQAIERYMKQAIVDK 151
Score = 87.8 bits (208), Expect = 3e-17
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
Frame = +1
Query: 67 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 234
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 235 LTTQEATIYFLPLRNCFSQ-----RTLCY 306
L T EAT F + F R +CY
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCY 89
>AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop
protein.
Length = 874
Score = 133 bits (321), Expect = 6e-31
Identities = 65/84 (77%), Positives = 72/84 (85%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRA 434
+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RA
Sbjct: 68 EAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRA 127
Query: 435 LCSITDSTMLQAIERYMKQAIVDK 506
LC ITDSTMLQAIERYMKQAIVDK
Sbjct: 128 LCQITDSTMLQAIERYMKQAIVDK 151
Score = 87.8 bits (208), Expect = 3e-17
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
Frame = +1
Query: 67 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 234
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 235 LTTQEATIYFLPLRNCFSQ-----RTLCY 306
L T EAT F + F R +CY
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCY 89
>AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein.
Length = 874
Score = 133 bits (321), Expect = 6e-31
Identities = 65/84 (77%), Positives = 72/84 (85%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRA 434
+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RA
Sbjct: 68 EAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRA 127
Query: 435 LCSITDSTMLQAIERYMKQAIVDK 506
LC ITDSTMLQAIERYMKQAIVDK
Sbjct: 128 LCQITDSTMLQAIERYMKQAIVDK 151
Score = 87.8 bits (208), Expect = 3e-17
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
Frame = +1
Query: 67 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 234
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 235 LTTQEATIYFLPLRNCFSQ-----RTLCY 306
L T EAT F + F R +CY
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCY 89
>BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein.
Length = 726
Score = 128 bits (308), Expect = 2e-29
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRA 434
+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRA
Sbjct: 68 EAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRA 127
Query: 435 LCSITDSTMLQAIERYMKQAIVDK 506
LC ITD TMLQAIERYMKQAIVDK
Sbjct: 128 LCRITDGTMLQAIERYMKQAIVDK 151
Score = 86.6 bits (205), Expect = 6e-17
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 9/84 (10%)
Frame = +1
Query: 82 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 249
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 250 ATIYFLPLRNCFSQ-----RTLCY 306
AT F + F R +CY
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCY 89
>BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein.
Length = 865
Score = 128 bits (308), Expect = 2e-29
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRA 434
+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRA
Sbjct: 62 EAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRA 121
Query: 435 LCSITDSTMLQAIERYMKQAIVDK 506
LC ITD TMLQAIERYMKQAIVDK
Sbjct: 122 LCRITDGTMLQAIERYMKQAIVDK 145
Score = 86.2 bits (204), Expect = 8e-17
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Frame = +1
Query: 100 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATIYFLPLRN 279
SN FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T EAT F +
Sbjct: 10 SNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTR 69
Query: 280 CFSQ-----RTLCY 306
F R +CY
Sbjct: 70 LFQSNDQTLRRMCY 83
>AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP
protein.
Length = 871
Score = 128 bits (308), Expect = 2e-29
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRA 434
+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRA
Sbjct: 68 EAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRA 127
Query: 435 LCSITDSTMLQAIERYMKQAIVDK 506
LC ITD TMLQAIERYMKQAIVDK
Sbjct: 128 LCRITDGTMLQAIERYMKQAIVDK 151
Score = 86.6 bits (205), Expect = 6e-17
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 9/84 (10%)
Frame = +1
Query: 82 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 249
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 250 ATIYFLPLRNCFSQ-----RTLCY 306
AT F + F R +CY
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCY 89
>AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protein
gamma2-COP protein.
Length = 871
Score = 128 bits (308), Expect = 2e-29
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRA 434
+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRA
Sbjct: 68 EAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRA 127
Query: 435 LCSITDSTMLQAIERYMKQAIVDK 506
LC ITD TMLQAIERYMKQAIVDK
Sbjct: 128 LCRITDGTMLQAIERYMKQAIVDK 151
Score = 86.6 bits (205), Expect = 6e-17
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 9/84 (10%)
Frame = +1
Query: 82 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 249
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 250 ATIYFLPLRNCFSQ-----RTLCY 306
AT F + F R +CY
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCY 89
>AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein.
Length = 871
Score = 128 bits (308), Expect = 2e-29
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRA 434
+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRA
Sbjct: 68 EAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRA 127
Query: 435 LCSITDSTMLQAIERYMKQAIVDK 506
LC ITD TMLQAIERYMKQAIVDK
Sbjct: 128 LCRITDGTMLQAIERYMKQAIVDK 151
Score = 86.6 bits (205), Expect = 6e-17
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 9/84 (10%)
Frame = +1
Query: 82 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 249
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 250 ATIYFLPLRNCFSQ-----RTLCY 306
AT F + F R +CY
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCY 89
>AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ12872 fis, clone NT2RP2003760, highly similar to
COATOMER GAMMA SUBUNIT. ).
Length = 799
Score = 121 bits (292), Expect = 2e-27
Identities = 59/78 (75%), Positives = 67/78 (85%)
Frame = +3
Query: 273 TKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITD 452
T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD
Sbjct: 2 TRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITD 61
Query: 453 STMLQAIERYMKQAIVDK 506
TMLQAIERYMKQAIVDK
Sbjct: 62 GTMLQAIERYMKQAIVDK 79
>BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 IFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-IIVTSSLTKDMTGKDDEYRPAAIRA 434
+F K + D+V ++LVYL + +P+ D+ ++ ++L KD + + R A+R+
Sbjct: 49 VFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRS 108
Query: 435 LCSITDSTMLQAIERYMKQAIVD 503
+CS+ + ++ Y++Q I++
Sbjct: 109 MCSL----RMPGVQEYIQQPILN 127
>AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 262
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 IFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-IIVTSSLTKDMTGKDDEYRPAAIRA 434
+F K + D+V ++LVYL + +P+ D+ ++ ++L KD + + R A+R+
Sbjct: 49 VFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRS 108
Query: 435 LCSITDSTMLQAIERYMKQAIVD 503
+CS+ + ++ Y++Q I++
Sbjct: 109 MCSL----RMPGVQEYIQQPILN 127
>AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 IFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-IIVTSSLTKDMTGKDDEYRPAAIRA 434
+F K + D+V ++LVYL + +P+ D+ ++ ++L KD + + R A+R+
Sbjct: 49 VFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRS 108
Query: 435 LCSITDSTMLQAIERYMKQAIVD 503
+CS+ + ++ Y++Q I++
Sbjct: 109 MCSL----RMPGVQEYIQQPILN 127
>AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex beta4
subunit protein.
Length = 739
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 IFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-IIVTSSLTKDMTGKDDEYRPAAIRA 434
+F K + D+V ++LVYL + +P+ D+ ++ ++L KD + + R A+R+
Sbjct: 49 VFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRS 108
Query: 435 LCSITDSTMLQAIERYMKQAIVD 503
+CS+ + ++ Y++Q I++
Sbjct: 109 MCSL----RMPGVQEYIQQPILN 127
>AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit variant protein.
Length = 771
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 IFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-IIVTSSLTKDMTGKDDEYRPAAIRA 434
+F K + D+V ++LVYL + +P+ D+ ++ ++L KD + + R A+R+
Sbjct: 81 VFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRS 140
Query: 435 LCSITDSTMLQAIERYMKQAIVD 503
+CS+ + ++ Y++Q I++
Sbjct: 141 MCSL----RMPGVQEYIQQPILN 159
>U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subunit
protein.
Length = 1093
Score = 33.5 bits (73), Expect = 0.63
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIR 431
++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R +A+R
Sbjct: 78 ELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALR 137
Query: 432 ALCSITDSTMLQAIERYMKQAIVD 503
L SI ++ + +K+A D
Sbjct: 138 VLSSIRVPIIVPIMMLAIKEASAD 161
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
the AP-3 complex protein.
Length = 1094
Score = 33.5 bits (73), Expect = 0.63
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIR 431
++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R +A+R
Sbjct: 78 ELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALR 137
Query: 432 ALCSITDSTMLQAIERYMKQAIVD 503
L SI ++ + +K+A D
Sbjct: 138 VLSSIRVPIIVPIMMLAIKEASAD 161
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 33.5 bits (73), Expect = 0.63
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIR 431
++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R +A+R
Sbjct: 78 ELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALR 137
Query: 432 ALCSITDSTMLQAIERYMKQAIVD 503
L SI ++ + +K+A D
Sbjct: 138 VLSSIRVPIIVPIMMLAIKEASAD 161
>AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein
complex 3 beta 1 subunit protein.
Length = 800
Score = 33.5 bits (73), Expect = 0.63
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIR 431
++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R +A+R
Sbjct: 78 ELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALR 137
Query: 432 ALCSITDSTMLQAIERYMKQAIVD 503
L SI ++ + +K+A D
Sbjct: 138 VLSSIRVPIIVPIMMLAIKEASAD 161
>U72395-1|AAB68948.1| 890|Homo sapiens MIP protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +3
Query: 279 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 446
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +3
Query: 279 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 446
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U70322-1|AAC50723.1| 890|Homo sapiens transportin protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +3
Query: 279 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 446
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein.
Length = 1081
Score = 32.7 bits (71), Expect = 1.1
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIR 431
D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R +A+R
Sbjct: 73 DLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALR 132
Query: 432 ALCSITDSTMLQAIERYMKQAIVD 503
L SI ++ + +K+A D
Sbjct: 133 VLSSIRVPIIVPIMMLAIKEAASD 156
>BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein
complex 3, beta 2 subunit protein.
Length = 1082
Score = 32.7 bits (71), Expect = 1.1
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIR 431
D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R +A+R
Sbjct: 73 DLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALR 132
Query: 432 ALCSITDSTMLQAIERYMKQAIVD 503
L SI ++ + +K+A D
Sbjct: 133 VLSSIRVPIIVPIMMLAIKEAASD 156
>BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +3
Query: 279 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 446
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B
subunit protein.
Length = 1082
Score = 32.7 bits (71), Expect = 1.1
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 DIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIR 431
D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R +A+R
Sbjct: 73 DLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALR 132
Query: 432 ALCSITDSTMLQAIERYMKQAIVD 503
L SI ++ + +K+A D
Sbjct: 133 VLSSIRVPIIVPIMMLAIKEAASD 156
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +3
Query: 279 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 440
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +3
Query: 279 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 440
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +3
Query: 279 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 440
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 928 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 979
>BC037248-1|AAH37248.1| 342|Homo sapiens family with sequence
similarity 137, member A protein.
Length = 342
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 118 LDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATI---YFLPLRNCFS 288
L T+ ++ Y P HP H +++ +L +G +TT++ I + L +NC S
Sbjct: 164 LQLRTVTEKIYYLKLHPDHPETVFHFWIRLVQILQKGLSITTKDPRILVTHCLVPKNCSS 223
>AF367470-1|AAK53406.1| 344|Homo sapiens testes development-related
NYD-SP18 protein.
Length = 344
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 118 LDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATI---YFLPLRNCFS 288
L T+ ++ Y P HP H +++ +L +G +TT++ I + L +NC S
Sbjct: 164 LQLRTVTEKIYYLKLHPDHPETVFHFWIRLVQILQKGLSITTKDPRILVTHCLVPKNCSS 223
>BC021297-1|AAH21297.1| 832|Homo sapiens DYNC1H1 protein protein.
Length = 832
Score = 29.9 bits (64), Expect = 7.7
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -1
Query: 412 YSSSLPVMSFVSEEVTMITSCAIGLNSLMHR*TKRRNTTSFD*NSFVVAKNIS*PPAWLI 233
Y +S V +E+ T ITS AIG ++ K N T+ +V+ KN+ P WL+
Sbjct: 235 YDASGHVEDLAAEQNTQITSIAIGSAEGFNQADKAIN-TAVKSGRWVMLKNVHLAPGWLM 293
>AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, heavy
polypeptide 1 protein.
Length = 4646
Score = 29.9 bits (64), Expect = 7.7
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -1
Query: 412 YSSSLPVMSFVSEEVTMITSCAIGLNSLMHR*TKRRNTTSFD*NSFVVAKNIS*PPAWLI 233
Y +S V +E+ T ITS AIG ++ K N T+ +V+ KN+ P WL+
Sbjct: 4049 YDASGHVEDLAAEQNTQITSIAIGSAEGFNQADKAIN-TAVKSGRWVMLKNVHLAPGWLM 4107
>AK093161-1|BAC04080.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ35842 fis, clone TESTI2006735. ).
Length = 243
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 130 TLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATI---YFLPLRNCFS 288
T+ ++ Y P HP H +++ +L +G +TT++ I + L +NC S
Sbjct: 69 TVTEKIYYLKLHPDHPETVFHFWIRLVQILQKGLSITTKDPRILVTHCLVPKNCSS 124
>AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein.
Length = 4658
Score = 29.9 bits (64), Expect = 7.7
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -1
Query: 412 YSSSLPVMSFVSEEVTMITSCAIGLNSLMHR*TKRRNTTSFD*NSFVVAKNIS*PPAWLI 233
Y +S V +E+ T ITS AIG ++ K N T+ +V+ KN+ P WL+
Sbjct: 4061 YDASGHVEDLAAEQNTQITSIAIGSAEGFNQADKAIN-TAVKSGRWVMLKNVHLAPGWLM 4119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,633,301
Number of Sequences: 237096
Number of extensions: 1857121
Number of successful extensions: 3612
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3612
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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