Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0168
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.26 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.4  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   3.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   4.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 555 PTPADALRPASERRVPRSPARLRTLHN 635
           PTP D   P+S R +   P   R L N
Sbjct: 55  PTPGDVPTPSSPRSISEDPLNCRDLPN 81


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
 Frame = +2

Query: 479 KREDPMVELFLTMTTDDNRN--NKSMSPDARRCTSPSK*TPGTEIPGPPAHASQP--GH 643
           K+ED  VE  L+   DD+ N        D R   SPS  +  T +   P H S P  GH
Sbjct: 22  KKEDEEVEHRLSDRDDDDENITVDDDDTDGRESLSPS--SAHTVLIPQPLHPSVPRLGH 78


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 260 SLLDGLKVRCQSRHYLSFSQSKIDSF 183
           SLL+ +++RC   + +SF     D F
Sbjct: 70  SLLNSIQIRCIESNMISFYLEATDDF 95


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 245 LKVRCQSRHYLSF 207
           L  RCQ RHY S+
Sbjct: 114 LPERCQQRHYYSY 126


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 310 PGVLLAQPADLRAEFLLLCSTD 245
           P V     ADLR+ F  LC  D
Sbjct: 158 PRVSAQMKADLRSHFRALCQDD 179


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 197 WIGRSSGNDGSGISPSVRRAEKQKLRTQVRRLCQENAWLR 316
           W  R   N+ +  S   RRA++ ++  +   L +EN  L+
Sbjct: 139 WEKRRKNNEAAKRSRDARRAKEDEIAIRCAFLERENCHLK 178


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 614 PPAHASQPGHTGPRRK 661
           PP H S P   GP  K
Sbjct: 316 PPLHISGPAEAGPLTK 331


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
 Frame = +2

Query: 572 TSPSK*TPG-TEIPGPPAH---ASQPGHTGPRRKARYQGPRGP 688
           +SPS   P  T  PGPP+H       G++ P     Y  P  P
Sbjct: 108 SSPSGNVPPLTPSPGPPSHPYTVISNGYSSPMSSGSYD-PYSP 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,026
Number of Sequences: 336
Number of extensions: 3539
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)