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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0168
         (697 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51642| Best HMM Match : No HMM Matches (HMM E-Value=.)             103   2e-22
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)                   40   0.001
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)              35   0.072
SB_7413| Best HMM Match : ATP_bind_1 (HMM E-Value=0)                   33   0.22 
SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.22 
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.22 
SB_4588| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.39 
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)                     32   0.39 
SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)                  32   0.39 
SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.51 
SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)                 32   0.51 
SB_54268| Best HMM Match : Vicilin_N (HMM E-Value=0.077)               31   0.67 
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)                     31   0.67 
SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.89 
SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_22230| Best HMM Match : CARD (HMM E-Value=3.8e-17)                  31   1.2  
SB_20196| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.2  
SB_59302| Best HMM Match : Collagen (HMM E-Value=0)                    30   1.6  
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_56500| Best HMM Match : Tctex-1 (HMM E-Value=0.0079)                30   1.6  
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)               30   1.6  
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022)                    30   1.6  
SB_54691| Best HMM Match : SWIRM (HMM E-Value=0.0033)                  30   2.1  
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)            30   2.1  
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)                     30   2.1  
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)        30   2.1  
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)            30   2.1  
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_51864| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_43401| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)               29   2.7  
SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06)              29   2.7  
SB_39441| Best HMM Match : SERTA (HMM E-Value=3.4)                     29   2.7  
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_31969| Best HMM Match : 7tm_1 (HMM E-Value=0)                       29   2.7  
SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)                  29   2.7  
SB_1307| Best HMM Match : Filament (HMM E-Value=0.13)                  29   2.7  
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_24452| Best HMM Match : PKD_channel (HMM E-Value=0)                 29   3.6  
SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06)                29   3.6  
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)                29   3.6  
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)                  29   3.6  
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)        29   4.8  
SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_42047| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_36009| Best HMM Match : Collagen (HMM E-Value=0)                    29   4.8  
SB_30272| Best HMM Match : GDI (HMM E-Value=0)                         29   4.8  
SB_22969| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_55388| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)               29   4.8  
SB_35719| Best HMM Match : OAD_gamma (HMM E-Value=5.3)                 29   4.8  
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_2770| Best HMM Match : ResIII (HMM E-Value=2.2)                     29   4.8  
SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037)          28   6.3  
SB_56363| Best HMM Match : Macscav_rec (HMM E-Value=0.74)              28   6.3  
SB_36571| Best HMM Match : Macscav_rec (HMM E-Value=0.74)              28   6.3  
SB_33648| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_25350| Best HMM Match : Collagen (HMM E-Value=0)                    28   6.3  
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)                     28   6.3  
SB_44682| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_39574| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_30869| Best HMM Match : DUF164 (HMM E-Value=0.18)                   28   6.3  
SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_236| Best HMM Match : QPP (HMM E-Value=1.8)                         28   6.3  
SB_41574| Best HMM Match : DUF164 (HMM E-Value=0.47)                   28   8.3  
SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  
SB_26644| Best HMM Match : Collagen (HMM E-Value=0)                    28   8.3  
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)              28   8.3  
SB_4107| Best HMM Match : M (HMM E-Value=8e-22)                        28   8.3  
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)                 28   8.3  
SB_25452| Best HMM Match : CTF_NFI (HMM E-Value=1.2)                   28   8.3  
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)               28   8.3  

>SB_51642| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 570

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/70 (70%), Positives = 55/70 (78%)
 Frame = +2

Query: 242 SVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRK 421
           S   AEKQKLR QV+RLCQENAWLR+EL+  QQ LQ SEQ VAQLEEE KHLEFM S++K
Sbjct: 87  STVEAEKQKLRAQVKRLCQENAWLREELSVTQQKLQESEQSVAQLEEEKKHLEFMNSLKK 146

Query: 422 YDSDINEESD 451
           YD D   E+D
Sbjct: 147 YDDDEGIEND 156



 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 8/80 (10%)
 Frame = +3

Query: 39  TQEEMVAGARTVAAGLEALRAEHTQLLAGLA----TNTEHENE----KASLVKKSIEAID 194
           TQ+E++   + V  GLE L+ EH+ +L GLA    T TE ++E    KA +V+ S++ I+
Sbjct: 11  TQDEIINNTKNVVRGLETLKNEHSGILNGLALYEDTKTESQSELEEAKAGVVQDSLDKIE 70

Query: 195 LGLGEAQVMTALASHLQSVE 254
           LGLGEAQV+ AL SHL +VE
Sbjct: 71  LGLGEAQVLMALCSHLSTVE 90



 Score = 31.5 bits (68), Expect = 0.67
 Identities = 16/22 (72%), Positives = 16/22 (72%)
 Frame = +3

Query: 582 ASERRVPRSPARLRTLHNLVIQ 647
           AS   V   PARLRTLHNLVIQ
Sbjct: 184 ASTSGVYEIPARLRTLHNLVIQ 205


>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
          Length = 5087

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
 Frame = +2

Query: 257  EKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDI 436
            EKQ+L++ V +L ++      E +     LQA  Q++ +LE  N  L   AS+ KY SD 
Sbjct: 4142 EKQELQSTVSQLQRKYQTKESENSEISGRLQAVRQKIVELERNNASLS--ASLEKYQSDF 4199

Query: 437  N---EESDSNRTGQGEKKRE 487
            N   +E D  +T      RE
Sbjct: 4200 NHTRQERDKYQTANYTYNRE 4219



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +2

Query: 344  LQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQ 469
            LQ SE  + QL EEN+HL  +  +  ++  ++EE +++ + +
Sbjct: 4605 LQRSEDTIHQLVEENEHLRTV--LDSHEDTVSEEGEASTSSE 4644


>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
          Length = 2858

 Score = 34.7 bits (76), Expect = 0.072
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
 Frame = +2

Query: 266  KLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLE-----EENKHLEFMASIRKYD- 427
            KL  Q+  L ++NA L+D+L  A   L  +++++A LE     +E  +    + + K D 
Sbjct: 922  KLENQIDTLRKQNAQLKDQLKDASNKLVQAKEKIATLEVKLSQQEKANQALNSVVAKKDK 981

Query: 428  --SDINEESDSNRTGQGEKKRE 487
              +DINE+    +    E KR+
Sbjct: 982  VIADINEKIKKYQKAADEAKRD 1003


>SB_7413| Best HMM Match : ATP_bind_1 (HMM E-Value=0)
          Length = 299

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
 Frame = +2

Query: 200 IGRSSGNDGSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQ-HLQASEQRVAQL 376
           +GR+         P   + +K+KL+ + +   ++   L+ +L   Q   L A+EQ +   
Sbjct: 183 VGRAEDEYEREYKPEYEKLKKEKLQKEEKEKTEQMEKLKKDLGEGQSVPLTATEQALLHT 242

Query: 377 EEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKS 547
           E +   +    ++   +SD   E         E+K+E    + FL  + + ++ +KS
Sbjct: 243 ERQTTGIAVGTAL---ESDSGSEGMQTDEEDEEEKKEYASFKRFLEQSKEKDKESKS 296


>SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 745

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 28/129 (21%), Positives = 53/129 (41%)
 Frame = +2

Query: 248 RRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYD 427
           +  E+QKL+ ++    QE  +LR ++  AQ  +      +AQL+ + +           D
Sbjct: 201 KEPEEQKLKEEIEEKVQELRYLRSQVTDAQTTVAVIRSELAQLKNDYE-----------D 249

Query: 428 SDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKSMSPDARRCTSPSK*TPGTEI 607
                E++     +  +++E    +L L  +   +      S D R   S S  TP + +
Sbjct: 250 QSSQLEAEKRNVMECVQEQESLTRQLQLLHSRRASNLTGEFSGDDRHPNSASASTPRSSV 309

Query: 608 PGPPAHASQ 634
             PP   S+
Sbjct: 310 AAPPPEGSR 318


>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2193

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221  DGSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLE 400
            DG+       + EK++   +++    E    + +   A+ +L+A ++R++ LE +NK+LE
Sbjct: 1599 DGAKRDRDKYQLEKEEAEKRLQSYEDELNEKQKQKEKAEDNLKALKKRISDLEVDNKNLE 1658

Query: 401  FMASIRKYDSDI-NEESDSNRTGQGEKKRE 487
                   Y+ DI N++    RT     K E
Sbjct: 1659 TARDNAVYERDIANQKFVEQRTDNEVLKEE 1688



 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +2

Query: 257  EKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFM 406
            ++ +L  Q   L Q+   L D+L  A + +   E  +A  + E+K+ EF+
Sbjct: 1342 QQTRLEQQKANLEQKIKHLEDDLEQANKRIDVLENALADQDSESKYGEFL 1391


>SB_4588| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 729

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
 Frame = +2

Query: 218 NDGSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQ-HLQASEQRVAQLEEENKH 394
           N    +S + RR  +++ R Q+RR  +E+    D+ AA ++   +  E R  Q E+E + 
Sbjct: 52  NMSEDLSEAARR--RRERREQMRRELEESKADEDDAAARREARRREREARRKQREQEEEE 109

Query: 395 LEFMASIRKYDSDINEESDSNRTGQGEKKRED 490
                S R+ D D +    S R  + EK+ E+
Sbjct: 110 PAPARSSRRRDQDGSGYISSRRRREVEKEEEE 141


>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
          Length = 1447

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = +2

Query: 242 SVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHL--EFMASI 415
           S+ R + Q+   ++R L +E   L  +L  A   L+   ++  +L  E ++L  E   S 
Sbjct: 548 SMTRQKLQEAEAKIRSLQEECKNLESQLNMANTDLKNIREKEFKLNSEKENLLTEGKTSS 607

Query: 416 RKYDSDINEESDSNRTGQGEKKREDPMVE 502
           +K  S IN  +D N + +   K  D  +E
Sbjct: 608 QKLQSKINTLTDENNSLKVRLKTTDGTIE 636


>SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)
          Length = 873

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
 Frame = +2

Query: 269 LRTQVRRLCQENAWLRDELAAAQQHL---QASEQRVAQLEEENK----HLEFMASIRKYD 427
           LR +   L +EN  L D     +Q L    A E+R+  LEEENK    H+  +A  R+ D
Sbjct: 287 LRKRSEELKEENELLYDNKLVLEQQLLGLSAKEERIEILEEENKKLKGHIHHIAEERQID 346

Query: 428 -SDINEESDSN 457
            + + E  + N
Sbjct: 347 QAKVKEVMEEN 357


>SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 842

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 22/75 (29%), Positives = 40/75 (53%)
 Frame = +2

Query: 278 QVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSN 457
           Q+ +  ++ A  + ELA  +Q  QA E++V  L+E N+ L+    +++Y        D N
Sbjct: 469 QLMQRSKQLANFKTELATTRQKNQALEEQVNALDERNRKLK--GELKRYQ-------DRN 519

Query: 458 RTGQGEKKREDPMVE 502
           R+ +GE ++    VE
Sbjct: 520 RSSEGEAQKYARTVE 534



 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 299 ENAWLRDELAAAQQHLQASEQRVAQLEEENKHLE 400
           ENA L+DE   + Q +  SEQ + QL ++   L+
Sbjct: 64  ENAGLKDEKRHSSQQITRSEQAIQQLNKDMSSLK 97


>SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)
          Length = 299

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 20/75 (26%), Positives = 31/75 (41%)
 Frame = +1

Query: 442 RVGQ*PYRSGREETRGPDGRAVPDDDHRRQQE**IDVARRPPMHFAQQVNAGYRDPRPAC 621
           R G   Y +G   + G D  +V  D+ R   E      ++P  +   Q ++GY  P PA 
Sbjct: 137 RRGTGSYENGERSSMGYDSTSVDYDNPREYTEPSAGYQQQPSTY--DQPSSGYMQPPPAA 194

Query: 622 ARFTTWSYRTPSQGP 666
             ++  SY      P
Sbjct: 195 LEYSAPSYNQVQSAP 209


>SB_54268| Best HMM Match : Vicilin_N (HMM E-Value=0.077)
          Length = 371

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +2

Query: 284 RRLCQENAWLRDELAAAQQHLQASEQRVAQLEEE--NKHLEFMASIRKYDSDINEESDSN 457
           ++L  +   L  E    +Q +Q  EQR+ + E E   K LEF +S+ +   D++ +    
Sbjct: 276 QKLLIKEEQLLHEKELLEQEMQHKEQRLQEWEREFQQKELEFSSSLERLRVDMDSDY-RQ 334

Query: 458 RTGQGEKKRED 490
           + GQ E + ED
Sbjct: 335 QMGQLESRLED 345


>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
          Length = 805

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 15/49 (30%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = +2

Query: 323 LAAAQQHLQASEQRVAQLEEENKHLEF-MASIRK-YDSDINEESDSNRT 463
           ++ + + L+  E R+A+LEEE  +LE  + ++RK  D+++ ++++ N T
Sbjct: 46  VSVSNERLEELEDRIAKLEEERDNLEVQLETVRKENDTEMEKQTNENDT 94


>SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 104

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 19/62 (30%), Positives = 34/62 (54%)
 Frame = +2

Query: 317 DELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPM 496
           +E A A+     +E++ A  EEE+K  E     +K +S+  EE  ++  G GE+K+++  
Sbjct: 18  EEAAPAEGEAPPAEEKPA--EEESKPEENKEEEKKEESEKKEEDKTDGGGGGEEKKDEEK 75

Query: 497 VE 502
            E
Sbjct: 76  KE 77


>SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 884

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
 Frame = +2

Query: 251  RAEKQKLRTQVR-RLCQENAWLRDELAAAQQHLQAS---EQRVAQLEEENKHLEFMAS-- 412
            R EK+K     R R  QE A LR+ +A  +  + A    ++R+ Q+EEE K  EF+ +  
Sbjct: 798  RVEKKKREEAERIRRRQEEA-LREAMAGDEARILADRLYQERLKQMEEEKKGEEFLNADQ 856

Query: 413  --IRKYDSDINEESDSNRTG 466
               +K +  I+EE    R G
Sbjct: 857  PPPKKREFGISEEKAGKRPG 876


>SB_22230| Best HMM Match : CARD (HMM E-Value=3.8e-17)
          Length = 555

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
 Frame = +2

Query: 245 VRRAEK-QKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFM--ASI 415
           V R EK  +++ ++ R    +A LR+E+ +   HL + + +    ++E + L+ M  A I
Sbjct: 111 VEREEKLAEMKNELTRARTHSARLREEITSIGTHLDSEKHKHEHTKKELEELKSMHQAMI 170

Query: 416 RKYDSDINEES 448
           +++ SD +  S
Sbjct: 171 KQFQSDFSTMS 181


>SB_20196| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 297

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = +2

Query: 230 GISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHL 397
           GI+PS ++  ++  R +  RL +     ++     +++++  E RVA LE +NK L
Sbjct: 226 GIAPSNQQIAEEATRKREMRLMKNREAAKECRRKKKEYVKCLENRVAVLENQNKTL 281


>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 618

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 6/152 (3%)
 Frame = +2

Query: 251 RAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDS 430
           R E Q+ + +++R   E    R+E+   Q+ LQ  E  + + +EE +    M  +R+ + 
Sbjct: 291 RQEIQRRQEELQRF--EEMQHREEMMR-QEMLQQQEMEMRRRDEEMR----MEEMRRREE 343

Query: 431 DINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNN------KSMSPDARRCTSPSK*T 592
             + E    R  Q E +R D   E+ L    D  R+       + M P       P    
Sbjct: 344 ARHHEEMMFRKKQEEMRRRD---EMMLRPPLDSMRDMGPGFPPRGMPPKEDWGPGPRGMG 400

Query: 593 PGTEIPGPPAHASQPGHTGPRRKARYQGPRGP 688
           PG    GPP     PG  GP       GPRGP
Sbjct: 401 PGM---GPPRPMGPPGPHGPP-----FGPRGP 424


>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
          Length = 993

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 605 IPGPPAHASQPGHTGPRRKARYQGPRGP 688
           +PGPP  AS P   GP      +GP GP
Sbjct: 624 LPGPPGPASPPSPPGPPGPPGPKGPPGP 651



 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 605 IPGPPAHASQPGHTGPRRKARYQGPRGP 688
           +PGPP  AS P   GP      +GP GP
Sbjct: 794 LPGPPGPASPPSPPGPPGPPGPKGPPGP 821



 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 605 IPGPPAHASQPGHTGPRRKARYQGPRGP 688
           +PGPP  AS P   GP      +GP GP
Sbjct: 879 LPGPPGPASPPSPPGPPGPPGPKGPPGP 906



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 605 IPGPPAHASQPGHTGPRRKARYQGPRGP 688
           +PGPP  AS P   GP       GP GP
Sbjct: 709 LPGPPGPASPPSPPGPPGPPGPNGPPGP 736


>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1444

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +2

Query: 245 VRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEE 385
           + + ++Q+L  Q R   ++   L ++  A  Q LQA E+R  Q+E+E
Sbjct: 464 MHQRQQQRLDDQARIFHRDRLALEEQQQALLQKLQAQEERSRQIEKE 510


>SB_56500| Best HMM Match : Tctex-1 (HMM E-Value=0.0079)
          Length = 502

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
 Frame = +2

Query: 431 DINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKSMSPDARRCTSPSK--*TPGTE 604
           ++NE  DS R    E++R      +    TTDDN ++ S+  +   C+S       P  E
Sbjct: 74  NVNELDDSLRDILIERQRNSRASSV---TTTDDNDDSASIVSELSTCSSAVTIGLEPVDE 130

Query: 605 IPG--PPAHASQPGHTGPRRKARYQGPRGP 688
           I    PP+ A+Q  H     KAR + PR P
Sbjct: 131 IESKYPPSPATQ--HKSFMSKARRKSPRPP 158


>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
          Length = 478

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +2

Query: 314 RDELAAAQQHLQASEQRVAQLEEENKHLEFMASIR-KYDSDINEESDSNRT 463
           R E      HL+    R+ +LE+EN+ L F+   + K++  ++ E ++ +T
Sbjct: 368 RMEAKMELDHLRTKADRIRKLEQENESLSFVVETKSKFERQLSVERETLKT 418


>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1218

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
 Frame = +2

Query: 251 RAEKQKLRTQVRRLCQENAWLRD-ELAAAQQHLQASEQRVAQLEEENKHL-----EFMAS 412
           + +K++L T+V+ L  ++      +   A++ +   EQ+V QLE E   L     EF   
Sbjct: 390 KEQKKELETKVQSLELKSLSSNSLDFRVAKEKISDLEQKVNQLEREKSRLLEENAEFKVR 449

Query: 413 IRKYDSDINEESDS--NRTGQGEKKRED 490
           + + +S+ +E SDS  N+  Q  K  ED
Sbjct: 450 MDELESEKSELSDSVLNKQRQLLKAEED 477


>SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022)
          Length = 340

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 197 KIDSFDALLNQRSLFILVFGVGCEASQQLRVLGSQGLEPRG 75
           +ID    L  Q   FIL+  VGC   ++      QGL+PRG
Sbjct: 46  EIDQQTQLKTQIDTFILILQVGCTLEEEDYFELEQGLKPRG 86


>SB_54691| Best HMM Match : SWIRM (HMM E-Value=0.0033)
          Length = 809

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
 Frame = +2

Query: 239 PSVRRAEKQKLRTQVRRLCQENAWLRDE---LAAAQQHLQASEQRVAQLEEENKHLE--- 400
           PS    +K+ LR  +      + W  ++   LA    HL     ++  LE + K  E   
Sbjct: 546 PSSLAKQKKLLRKSLMAAADISRWASEQNQDLARINSHLDNLYAQINPLEAKLKSSEERC 605

Query: 401 --FMASIRKYDSDINEESDSNRTGQGE-KKREDPMVELFLTMTTDDNRNNKSM 550
                 I+  + D N E D  +  +GE K++   +VE   T+ +D    NK++
Sbjct: 606 QSLQKEIKSLEDDFNVERDQMKEREGEFKQKLQKIVEDKDTLLSDAVDANKTL 658


>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
          Length = 1148

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
 Frame = +2

Query: 239 PSVRRAEKQKLRTQVRRLCQENAWLRDE---LAAAQQHLQASEQRVAQLEEENKHLE--- 400
           PS    +K+ LR  +      + W  ++   LA    HL     ++  LE + K  E   
Sbjct: 473 PSSLAKQKKLLRKSLMAAADISRWASEQNQDLARINSHLDNLYAQINPLEAKLKSSEERC 532

Query: 401 --FMASIRKYDSDINEESDSNRTGQGE-KKREDPMVELFLTMTTDDNRNNKSM 550
                 I+  + D N E D  +  +GE K++   +VE   T+ +D    NK++
Sbjct: 533 QSLQKEIKSLEDDFNVERDQMKEREGEFKQKLQKIVEDKDTLLSDAVDANKTL 585


>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
          Length = 430

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 26/98 (26%), Positives = 42/98 (42%)
 Frame = +2

Query: 245 VRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKY 424
           V + EK+K  +   +  Q+ A   D+LA  + + Q  +QR  Q++EEN        +RK 
Sbjct: 114 VEQEEKRKTLSAETQQHQQRAQYEDQLARKRYNDQLGQQR--QMQEEN--------LRKQ 163

Query: 425 DSDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRN 538
           +  +  +    R      KR  P+ E      T D  N
Sbjct: 164 EESVKRQEAIRRYAMFASKRILPVREFNTRRYTSDEVN 201


>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 681

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +2

Query: 611 GPPAHASQPGHTGPRRKARYQGPRGP 688
           GPP H   PG  G R K    GP GP
Sbjct: 265 GPPGHPGPPGVRGRRGKRGPPGPPGP 290


>SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 309

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 284 RRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRT 463
           RR  +ENA  +DE A      Q+S+  V       K  +   S  + DSD+ +ESD   +
Sbjct: 229 RRRKKENARFKDE-ATGSSRKQSSDDDVYNTGYPGK--DKFESWSEDDSDVTDESDDAIS 285

Query: 464 GQGEKK 481
           G G +K
Sbjct: 286 GPGTQK 291


>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
          Length = 3107

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +2

Query: 311  LRDELAAAQQHLQASEQRVAQLEE-ENKHLEFMASIRKYDSDINEESDSNRTGQGEKKRE 487
            L DEL  AQQ  +  +Q V++L++  ++H + +   RK  S++ E   +N   + E  +E
Sbjct: 2297 LNDELYEAQQKAEKLQQTVSELQQTADEHSKDLHDTRKKISEL-ESDRNNLMAENENLKE 2355

Query: 488  D 490
            +
Sbjct: 2356 E 2356


>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
          Length = 1774

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/43 (27%), Positives = 28/43 (65%)
 Frame = +2

Query: 257  EKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEE 385
            E +K++     + +EN  LR+EL  A++H+++ +  + Q+E++
Sbjct: 1420 ELKKVQDSSNEIHKENQDLREELKMAKRHIESLKSTLIQVEQQ 1462


>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1853

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
 Frame = +2

Query: 554 PDARRCTSPSK*TPGTE----IPGPPAHASQPGHTGPRRKARYQGPRGP 688
           PD  R        PGT+    I GPP     PG  GP+      GP GP
Sbjct: 517 PDGDRGPQGPTGFPGTKGNQGIAGPPGQIGDPGKMGPQGFKGDPGPPGP 565



 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 593 PGTEIPGPPAHASQPGHTGPRRKARYQGPRGP 688
           PG    GPP      G+TGP       GP GP
Sbjct: 631 PGDSDYGPPGDKGLKGNTGPPGDEGVPGPIGP 662


>SB_51864| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 270

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = +2

Query: 224 GSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEF 403
           G G  P+V +    +L  QV  L +EN  L +   +        E+R  + +   K L  
Sbjct: 76  GGGNKPTVTQGHILELSRQVESLLEENRRLEELAGSPSSRSARKERRAVKSDFTIKDLRS 135

Query: 404 MASIRK 421
           +A+I K
Sbjct: 136 VANIEK 141


>SB_43401| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 551

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +2

Query: 374 LEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKSMS 553
           L +  + L+  +   K  S +N+E          K R+D +V+L    T  +  N+++ +
Sbjct: 461 LAQRPETLQRHSEATKQSSPVNKEQPHESDTPNTKTRQDSLVDL----TPQEPANSETFT 516

Query: 554 PDARRCTSPSK*TPGTE-IPGPP 619
              R CT P + TPG E IP  P
Sbjct: 517 --TRTCTRP-EITPGPETIPKSP 536


>SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)
          Length = 762

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = +2

Query: 317 DELAAAQQHLQASEQRVAQLEEENKHLEFMA-SIRKYDSDINEESDSNRTGQGEKKREDP 493
           +++A+    +  S +R+  LEEE  HL+     +    +   EE  S +   GEK+ E  
Sbjct: 278 EQVASLNDIVNVSAERIRALEEELGHLKASKDELNTLRNSFAEEYSSLQQMLGEKENEIS 337

Query: 494 MVELFLTMTTDDNRNNKSMSPDARRCTSPS 583
           ++E  L      N  N+S +     C  P+
Sbjct: 338 LLEASL------NERNQSFTVMETSCLEPN 361


>SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06)
          Length = 1977

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 251 RAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDS 430
           R E ++LR + R+L +E    R  L   ++  +A+E+R        +H +   + RK+  
Sbjct: 214 RPESEELRDRARQLSRETNKRRKNLEEKKKQKEAAEERERAAILAERHNQKEEATRKFQK 273

Query: 431 D 433
           D
Sbjct: 274 D 274


>SB_39441| Best HMM Match : SERTA (HMM E-Value=3.4)
          Length = 463

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -1

Query: 199 PRSIASMLFLTREAFSFSCSVLVARPASSCVCSALRASSPAATV 68
           PR+ A M FL   A S +C  LV +P  S   + + ASS    V
Sbjct: 396 PRAWADMGFLGHHAISINCQSLVPKPLPSWPLALVIASSHVVLV 439


>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1393

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 24/107 (22%), Positives = 47/107 (43%)
 Frame = +2

Query: 245  VRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKY 424
            VRR E+++ R + RRL ++     +     ++  +  E+   +  EE   L   A  R+ 
Sbjct: 1092 VRRLEEERKREEERRLAEQRRVEEERRRKEEEEQRRREEEERRRREEEDRLREEARRREE 1151

Query: 425  DSDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKSMSPDAR 565
            +  + +E    R  + E++ E+      +    DD R  +S   D+R
Sbjct: 1152 ERRLEDER-WEREREEERRWEEERRRRSMGRYPDD-RGRRSPYDDSR 1196



 Score = 27.9 bits (59), Expect = 8.3
 Identities = 35/129 (27%), Positives = 55/129 (42%)
 Frame = +2

Query: 182  RSYRSWIGRSSGNDGSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQ 361
            R     IGR  G    G S    R+ ++ +R +  R  +E    R+E   A+Q  +  E+
Sbjct: 1011 RDEEDTIGRVRGRRERGES----RSREEIMREEEERERREADRRREEERIAEQKRRDDEE 1066

Query: 362  RVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNN 541
            R+ + EEE + LE     R+ +    EE    R  + E+KRE+    L      ++ R  
Sbjct: 1067 RLRR-EEEERRLE--EERRREEERKREEV---RRLEEERKREEER-RLAEQRRVEEERRR 1119

Query: 542  KSMSPDARR 568
            K      RR
Sbjct: 1120 KEEEEQRRR 1128


>SB_31969| Best HMM Match : 7tm_1 (HMM E-Value=0)
          Length = 655

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 27/68 (39%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = -3

Query: 683 HGDPGTGPCDGVLYDQVVKRAQAGRGSRYPAFTCWAKCIGG--RRATSIYYSCCRRWSSS 510
           HGDP T     VLY  V+  A  G         C A CI    RRATS Y+      S  
Sbjct: 27  HGDPLTVAL-AVLYVIVIVSAIVGN-----VLVCIAVCISSSLRRATSSYFIFSLALSDI 80

Query: 509 GTARPSGP 486
           GTA  S P
Sbjct: 81  GTASLSMP 88


>SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)
          Length = 298

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 24/131 (18%), Positives = 55/131 (41%)
 Frame = +2

Query: 173 EEHRSYRSWIGRSSGNDGSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQA 352
           ++ +  R W  R   N  +  S  +RR ++ ++  + ++L +ENA LR+EL   +   + 
Sbjct: 164 DQEKDDRYWARRVKNNVAARRSRDMRRQKEIEISMKWKQLEKENARLREELQQLKDRARI 223

Query: 353 SEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPMVELFLTMTTDDN 532
             +  ++    ++  +  A I    ++      +N      +KR  P+  +      + +
Sbjct: 224 PYRNYSRSSLSDRSRKRPAPITTTITNHRLNCHTNSVILSSRKRPAPITTMITNHRLNCH 283

Query: 533 RNNKSMSPDAR 565
            N   +S   R
Sbjct: 284 TNTVILSSRKR 294


>SB_1307| Best HMM Match : Filament (HMM E-Value=0.13)
          Length = 916

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
 Frame = +2

Query: 95  ESRAHAAAGWPRNQHRTRE*KGFSG*EEHRSYRSWIGRSSGNDGSGISP-SVRRAEKQKL 271
           +S+ H A    R+Q  T E       EE R ++  I +   N+ S        + E  ++
Sbjct: 298 KSKLHEAEKKYRDQQTTLEDLRLDHEEETRKFKKEIAKLEDNERSKTRLLEYHKHEILQM 357

Query: 272 RTQVRRLCQE-NAWLRDELAAA---QQHLQASEQRVAQLEEENKHL 397
           +T    + Q   + + +EL+     Q H+   E+ +  LEEE K L
Sbjct: 358 KTNHNEVIQSLESRIEEELSIKSDIQTHVHTLERNIQALEEERKEL 403


>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1414

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
 Frame = +2

Query: 416 RKYDSDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKSMSPD--ARRCTSPSK* 589
           R YD     E +S   G+ + +R+DP  +    M+    R+     PD    R   P   
Sbjct: 640 RPYDDPEGLERESR--GERDVRRDDPREDRRPGMSEGRGRDRPER-PDRTGERGREPRYS 696

Query: 590 TPGTEIPGPPAHAS-QPGHTGPRRKARYQGPRG 685
           TP     GP  H    P   GP R A Y  PRG
Sbjct: 697 TP----QGPDYHRRPSPSPPGPPRNAPYGPPRG 725


>SB_24452| Best HMM Match : PKD_channel (HMM E-Value=0)
          Length = 1433

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +3

Query: 69  TVAAGLEALRAEHTQLLAGLATNTEHENEKASLVKKSIEAIDL 197
           +V + + AL A   QL+  +ATN   +++ AS V+ ++  IDL
Sbjct: 125 SVLSTMRALFARALQLVIDMATNPYKDDKSASSVESNVMEIDL 167


>SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06)
          Length = 88

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = +2

Query: 593 PGTEIPGPPAHASQPGHTGPRRKARYQGPRGP 688
           PG E  GPP      G  GPR    YQG  GP
Sbjct: 3   PGIE--GPPGPKGDRGPIGPRGPQGYQGAPGP 32


>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
          Length = 346

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 593 PGTEIPGPPAHASQPGHTGPRRKARYQGPRGP 688
           PG   P   +    PG  GPR    Y+GP+GP
Sbjct: 71  PGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGP 102


>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
          Length = 601

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
 Frame = +2

Query: 242 SVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEE-ENKHLEFMASIR 418
           S +  E  +++  ++R+C +   +        Q     E ++AQL+E EN++       +
Sbjct: 268 STKNDESGRIQALIKRVCLQYKRINRLEETRHQEKAEMELKMAQLKEIENEYSVKADQYK 327

Query: 419 KYDSDINEESDSNRTGQGEKKREDPMVELFL 511
           ++ +D+ EE D  +     +  E   V L L
Sbjct: 328 QHIADLEEEKDQLQNELDSQTEELRQVSLCL 358


>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
          Length = 3071

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
 Frame = +2

Query: 269  LRTQVRRLCQENAWLRDELAAAQ-QHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEE 445
            LR +   L +EN  L+ ELA  + +H +   ++V  +E+  K +E        D D N+ 
Sbjct: 1520 LRNERDGLVKENGDLKRELARIENEHNKVVREKV-DIEKCYKTIEEQTRSMADDYDSNKG 1578

Query: 446  SDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKSMSPDARR 568
              SN + + +  +E  ++E+ +       +NN+    +A R
Sbjct: 1579 GASNLSDEVDVSKEKTILEVQVQEQESMVQNNEMQLLNAER 1619


>SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 931

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 617 AGRG-SRYPAFTCWAKCIGGR--RATSIYYSCCRRWSSSG 507
           +G+G + +  F C  +    R  +A  I++ CCRRW S G
Sbjct: 852 SGQGFANFLLFCCLTERFKTRLWKAFMIWFECCRRWKSPG 891


>SB_42047| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 715

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +2

Query: 191 RSWIGRSSGNDGSGISPSVRRAEKQKLRTQVRRLCQE-NAWLRDELAAAQQHLQASEQRV 367
           R+ + +S+ +   GIS      +  KL+  +  LC   N   + +LA      Q +E  V
Sbjct: 605 RTCLSKSAKDQAVGISSLTMPPDTSKLKKHIALLCDRLNKGGKLDLAMTSGSSQGNEMPV 664

Query: 368 AQLEEENKHLE 400
           AQ  +  K LE
Sbjct: 665 AQAPKSVKALE 675


>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
          Length = 687

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +2

Query: 593 PGTEIP-GPPAHASQPGHTGPRRKARYQGPRGP 688
           PGT+ P G P    +PG  GP  +    G  GP
Sbjct: 147 PGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGP 179


>SB_30272| Best HMM Match : GDI (HMM E-Value=0)
          Length = 1199

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -1

Query: 178  LFLTREAFSFSCSVLVARPASSCVCSALRASSPAATVRAPATISSCVI 35
            + L R A S+S  +L   P+S  +  A RASS +  V    T SSC I
Sbjct: 1073 ILLARRALSYSLVLLYLTPSSCFILLARRASSYSLVV-LHLTRSSCFI 1119


>SB_22969| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 817

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 512 SGTARPSGPRVSSRPDLYGYC 450
           SG   P+  +VS   DLYGYC
Sbjct: 173 SGACAPNSKQVSGAGDLYGYC 193


>SB_55388| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 512 SGTARPSGPRVSSRPDLYGYC 450
           SG   P+  +VS   DLYGYC
Sbjct: 190 SGACAPNSKQVSGAGDLYGYC 210


>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
          Length = 758

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +2

Query: 299 ENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEK 478
           E   L DE+  +   L+A E R++ LE +NK L   AS  +      E++D     +  K
Sbjct: 496 EKLCLDDEVPISSCELEAFETRLSDLERQNKALRTGASADQAMIQCLEDNDIEPALEETK 555

Query: 479 KREDPM-VEL 505
           +    M VEL
Sbjct: 556 ESNSSMLVEL 565



 Score = 28.3 bits (60), Expect = 6.3
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +2

Query: 266 KLRTQVRRLCQENAWLRDELAAAQQHLQ---ASEQRVAQLEEENKHLEFMASIRKYDSDI 436
           ++RTQ+  L QEN  L++EL A + + +      QR+ + E+E   ++   + +  +SD 
Sbjct: 365 QMRTQLDMLAQENFRLQNELDAKRNYEEEYFELRQRMQEAEDEMASMKHEYATKTGESDF 424

Query: 437 NEE 445
             E
Sbjct: 425 LSE 427


>SB_35719| Best HMM Match : OAD_gamma (HMM E-Value=5.3)
          Length = 262

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 515 MTTDDNRNNKSMSPDARRCTSPSK*TPGTE-IPGPPA-HASQPGHTGPR 655
           +T D+ +  ++     R+CT P    PG E IPGP     S P   GPR
Sbjct: 207 LTRDNTKLVQANLAQRRKCTGPEM-IPGPETIPGPETIPKSPPNDPGPR 254


>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1711

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
 Frame = +2

Query: 269  LRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEES 448
            + + + R C E    ++EL   +  L+ +E    QLEEE    +  A + KYD+ ++ + 
Sbjct: 1385 MNSDLERTCDELQIAQNELKELRCQLEKNETDKGQLEEELIKTK-DALLEKYDAMLSLQR 1443

Query: 449  DSNRTGQGEKKREDPMVELFLTM-TTDDNRNNKSMSPDARR 568
                      +  + + E   ++ T +D +NN ++  DA R
Sbjct: 1444 RVQELQYKWDQHVEEIQEKDTSIKTLNDEKNNLTIDMDALR 1484


>SB_2770| Best HMM Match : ResIII (HMM E-Value=2.2)
          Length = 928

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 670 VPGLATGSCMTRL*SVRRRAGDLGTRRSLAGRSASAGV 557
           +P     SC++R  S RR+ G      +L GR  SAGV
Sbjct: 33  IPDDVNSSCLSR--SYRRKCGQRNVDATLRGRDISAGV 68


>SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037)
          Length = 396

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = +2

Query: 287 RLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTG 466
           +L ++ A L      ++Q L+  E+   Q+EE+    E +    KY+  + EE ++N   
Sbjct: 65  KLQEKTAQLDQSQEESRQQLREYEETKKQIEEDADR-EILDIKNKYERRLREEKEANLRL 123

Query: 467 QGE 475
           +GE
Sbjct: 124 KGE 126


>SB_56363| Best HMM Match : Macscav_rec (HMM E-Value=0.74)
          Length = 187

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +2

Query: 308 WLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKK 481
           W +D        L   ++ V +LEEENK    +A   KY     +E   +R  Q  +K
Sbjct: 85  WKKDTKDRYSMLLDNRDRMVRRLEEENKREIQIAEAEKYKLKFEQEERLHREVQQREK 142


>SB_36571| Best HMM Match : Macscav_rec (HMM E-Value=0.74)
          Length = 222

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +2

Query: 308 WLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKK 481
           W +D        L   ++ V +LEEENK    +A   KY     +E   +R  Q  +K
Sbjct: 87  WKKDTKDRYSMLLDNRDRMVRRLEEENKREIQIAEAEKYKLKFEQEERLHREVQQREK 144


>SB_33648| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
 Frame = +2

Query: 218 NDGSGISPSVRRAEKQKLR----TQVRRLCQENAWLRDELAAAQQHLQASEQRVA---QL 376
           N+  G+   V + +  KL      ++  + QEN     EL AA++  + +E+R++   +L
Sbjct: 125 NENGGVRQDVAKLKGFKLAMGSVAEIDAVIQENTERVQELVAAKRARERNEERLSEIDEL 184

Query: 377 EEENKHLEFMASIRK 421
           E  N+ LE    +R+
Sbjct: 185 ERGNRELENRKPLRE 199


>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
          Length = 1112

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = +2

Query: 593 PGTE----IPGPPAHASQPGHTGPRRKARYQGPRGP 688
           PG E    +PG P    + G TG R     QGP+GP
Sbjct: 176 PGNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGP 211



 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 608 PGPPAHASQPGHTGPRRKARYQGPRGP 688
           PGP  +  QPG+ G R     QG +GP
Sbjct: 33  PGPLGYNGQPGNQGMRGDPGPQGDQGP 59


>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2672

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 263  QKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEE 385
            +KLR ++     +NA   DE+A  ++   A E R ++ EE+
Sbjct: 1826 EKLRVKLSEAQNQNATFSDEMARLKEQSSAMEVRCSKSEED 1866


>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
          Length = 3489

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
 Frame = +2

Query: 251  RAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEE-----NKHLEFMASI 415
            R ++ + R  V    +  A L   L   Q H+   E++  +LEEE      K +E ++ +
Sbjct: 2140 RVKELQERLGVETDAKTQALLESALGEYQDHIDMLERKSKELEEELNTKSEKEVEMLSRV 2199

Query: 416  RKYDSDINEESDSNRTGQGEKKR 484
             +   ++ +  +S   G+  +K+
Sbjct: 2200 NELQEELAKALESAEAGKKAEKQ 2222


>SB_44682| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 49

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 257 EKQKLRTQVRRLCQENAWLRDELAAAQQHLQ 349
           E+QK+ T+++RL +EN  L ++L  A   L+
Sbjct: 4   ERQKMETELKRLHRENRRLTEDLRTASGQLR 34


>SB_39574| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 807

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +3

Query: 591 RRVPRSPARL---RTLHNLVIQDPVARPGTRVPVA 686
           +R PR+P  L   RT+H + +  P A PG  + VA
Sbjct: 10  QRTPRTPLGLKAERTVHRVTLNPPTASPGETLYVA 44


>SB_30869| Best HMM Match : DUF164 (HMM E-Value=0.18)
          Length = 442

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
 Frame = +2

Query: 278 QVRRLCQENAWLRDELAAAQQHLQASEQR----VAQLEEENKHL 397
           ++ R+ QE A L+D+L  A     ++EQR    VA+LEEE + +
Sbjct: 255 RLERVQQERADLQDQLKIATDESLSAEQRAQMLVARLEEEERKI 298


>SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 747

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/60 (35%), Positives = 26/60 (43%)
 Frame = -1

Query: 622 RRRAGDLGTRRSLAGRSASAGVGRHRFIIPVVVGGHRQEQLDHRVLAFLLALTCTVTVRL 443
           R +  DLG  +  A  S S  VG    + P +  GH    +D   L  LL   C  TVRL
Sbjct: 603 RGKITDLGFCKPEAMMSGSI-VGTPIHMAPELFSGHYDNSVDVYALGILLWYICAGTVRL 661


>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1507

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +2

Query: 296 QENAWLRDELAAAQQHLQASEQRVAQLEEENKHL-EFMASIRKYDSDINEESDSN 457
           QE   +R+E       L+ S +   +L+EE  HL + M+S R  DS +    + N
Sbjct: 210 QEQEMMREEHQREMSTLRVSYEERLKLQEERHHLDQDMSSPRSTDSAVKALKEEN 264


>SB_236| Best HMM Match : QPP (HMM E-Value=1.8)
          Length = 217

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/122 (13%), Positives = 49/122 (40%)
 Frame = +2

Query: 122 WPRNQHRTRE*KGFSG*EEHRSYRSWIGRSSGNDGSGISPSVRRAEKQKLRTQVRRLCQE 301
           W   +  T + K        R+ ++WI +    + +    + ++ + ++   + RR   +
Sbjct: 67  WTEQEEDTEQTKRARTRRRQRTDKAWIEQEEDREQTNRGQNKKKTQNRQSVDRTRRQRTD 126

Query: 302 NAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKK 481
            +W   E    Q     ++++    +   +      + + +   I +E D  +T +G+ K
Sbjct: 127 KSWTEQEEDTEQTKRGQNKKKTQNRQSVQRTRRRQRTDKAW---IEQEEDREQTNRGQNK 183

Query: 482 RE 487
           ++
Sbjct: 184 KK 185


>SB_41574| Best HMM Match : DUF164 (HMM E-Value=0.47)
          Length = 361

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +2

Query: 233 ISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEE 385
           +S   ++ E + LRT  +    E  +LR+ELA A+    + + +V ++++E
Sbjct: 172 LSEERQQVELENLRTSYQVAKSEAVFLRNELAEARVSKNSYQSKVFEMKDE 222


>SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1097

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +2

Query: 389 KHLEFMASIRKYDSDINEESDSNRTGQGEKKRED 490
           KHL  +A+++K + D +  S+  R   GE++RE+
Sbjct: 619 KHLPKLAAVKK-EKDKSSSSEEERAKSGEEEREE 651


>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 323

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = +2

Query: 572 TSPSK*TPGTEIPGPPAHASQPGHTGPRRKARYQGPRGP 688
           T P   T  T   GP       G TGP+      GP GP
Sbjct: 57  TGPKGDTGATGPTGPKGDTGATGPTGPKGDTGATGPNGP 95



 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +2

Query: 572 TSPSK*TPGTEIPGPPAHASQPGHTGPRRKARYQGPRGP 688
           T P   T  T+  GP       G TGP+      GP GP
Sbjct: 111 TGPKGDTGPTDPTGPNGDTGATGPTGPKGDTGATGPTGP 149



 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +2

Query: 572 TSPSK*TPGTEIPGPPAHASQPGHTGPRRKARYQGPRGP 688
           T P+  T  T   GP       G TGP+      GP GP
Sbjct: 123 TGPNGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGP 161


>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
          Length = 877

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +2

Query: 593 PGTEIP-GPPAHASQPGHTGPRRKARYQGPRGP 688
           PG   P GP     QPG  GP   A   G RGP
Sbjct: 837 PGPPGPNGPVGQTGQPGTPGPDGAAGEPGARGP 869



 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +2

Query: 593 PGTEIPGPPAHASQPGHTGPRRK 661
           PGT  PGP   A +PG  GPR K
Sbjct: 852 PGT--PGPDGAAGEPGARGPRGK 872


>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
          Length = 783

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
 Frame = +2

Query: 221 DGSGISPSVRRAEKQK--LRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKH 394
           DG G     ++ +K+K  +  + +++ + N  L  ++    + L+  E+R  Q EEE   
Sbjct: 397 DGEGGDKKKKKKKKKKKGVEEEEKKVKKPNKALVKQMQQQLEQLKLEEERQRQAEEEKIR 456

Query: 395 LEFMASIRKYDSD----INEESDSNRTGQGEKK-REDPMVE 502
               A  R+ + D    + +E       + EKK ++  M+E
Sbjct: 457 QREEAEARRLEKDRKARLKQEGKLLSKAEKEKKAKQQAMLE 497


>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
          Length = 2039

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -1

Query: 217 T*ASPNPRSIASM-LFLTREAFS-FSCSVLVARPASSCVCSALRASSPAATVRAPATISS 44
           T  SP P     M  FL  E  S F  SV  +R +     S  RA SPA +  A AT++S
Sbjct: 384 TLGSPGPDVEDQMDSFLQEEEDSGFRRSVSPSRASRMRSMSPTRARSPAMSDNALATVNS 443

Query: 43  CV 38
           C+
Sbjct: 444 CL 445


>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2839

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = +2

Query: 248  RRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYD 427
            +R E+Q+   +  RL +E   LR+E    ++  +  E++    E EN ++E+  + R  +
Sbjct: 2384 QRQEEQRESQRRARLLEEQR-LREEREEMERARRELEEKNRLAERENLNMEYSENERAME 2442

Query: 428  SD 433
            SD
Sbjct: 2443 SD 2444


>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
          Length = 1463

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 611 GPPAHASQPGHTGPRRKARYQGP 679
           GPP H  QPGH       R+ GP
Sbjct: 915 GPPPHWVQPGHMRGPHPMRFPGP 937


>SB_25452| Best HMM Match : CTF_NFI (HMM E-Value=1.2)
          Length = 1056

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 250 SSREAKTPHAGPQAVPRERLAEGRAGCS 333
           SS  A  P   P+  PR +  +G AGCS
Sbjct: 473 SSTYATEPEGSPKTPPRSQRPDGPAGCS 500



 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 314 RDELAAAQQHLQASEQRVAQLEEENKH 394
           RD+LA  Q H+QA   RV Q+ E  +H
Sbjct: 631 RDQLAVRQLHMQAFPGRVPQVMEAFEH 657


>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
          Length = 863

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 31/153 (20%), Positives = 61/153 (39%), Gaps = 1/153 (0%)
 Frame = +2

Query: 230 GISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMA 409
           G +  VR+ +   + +  +R C    +      A  + +Q  +  V++L+   KH E + 
Sbjct: 362 GYTKQVRQKDADVICSTFQR-CLRVVFTDPSQGALLKRVQEMKANVSRLKTAMKHPESLE 420

Query: 410 SIRKYDSDINEESDSNRTGQGE-KKREDPMVELFLTMTTDDNRNNKSMSPDARRCTSPSK 586
            I  Y +   +E +     +G   K E  + +  L MT+   +  + ++   ++  +  +
Sbjct: 421 KIWTYLNFTLDELERLAVMRGNWVKVEQRLFQQTLVMTSFKAKL-EMLNNTIQKAVADRQ 479

Query: 587 *TPGTEIPGPPAHASQPGHTGPRRKARYQGPRG 685
                   GP       G  GPR     QGP+G
Sbjct: 480 ENKSHGAAGPKGDRGPAGPPGPRGLPGAQGPQG 512


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,260,806
Number of Sequences: 59808
Number of extensions: 511022
Number of successful extensions: 2796
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 2159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2762
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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