Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0168
(697 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g20470.1 68415.m02390 protein kinase, putative contains prote... 34 0.078
At1g32530.1 68414.m04014 zinc finger (C3HC4-type RING finger) fa... 33 0.24
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 32 0.32
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 32 0.32
At5g03720.1 68418.m00332 heat shock transcription factor family ... 32 0.32
At4g27180.1 68417.m03904 kinesin-like protein B (KATB) 32 0.32
At3g23310.1 68416.m02940 protein kinase, putative contains prote... 32 0.32
At1g01660.1 68414.m00084 U-box domain-containing protein 32 0.32
At5g01970.1 68418.m00116 expressed protein 31 0.73
At4g31880.1 68417.m04531 expressed protein 31 0.73
At4g27595.1 68417.m03964 protein transport protein-related low s... 31 0.73
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 31 0.73
At1g67170.1 68414.m07641 expressed protein similar to enterophil... 31 0.73
At4g26660.1 68417.m03841 expressed protein weak similarity to ph... 31 0.96
At3g63350.1 68416.m07129 heat shock transcription factor family ... 31 0.96
At2g27920.1 68415.m03384 serine carboxypeptidase S10 family prot... 31 0.96
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 30 1.3
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 29 2.2
At4g25730.1 68417.m03703 FtsJ-like methyltransferase family prot... 29 2.2
At4g02800.1 68417.m00380 expressed protein similar to A. thalian... 29 2.2
At1g22060.1 68414.m02759 expressed protein 29 2.2
At1g06210.1 68414.m00654 VHS domain-containing protein / GAT dom... 29 2.2
At4g31570.1 68417.m04483 expressed protein 29 2.9
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 29 2.9
At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH) domain... 29 2.9
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 29 2.9
At2g35530.1 68415.m04352 bZIP transcription factor family protei... 29 2.9
At2g03630.1 68415.m00323 hypothetical protein 29 2.9
At2g02790.1 68415.m00222 calmodulin-binding family protein very ... 29 2.9
At1g45249.2 68414.m05192 ABA-responsive element-binding protein ... 29 2.9
At5g54410.1 68418.m06777 hypothetical protein 29 3.9
At5g41410.1 68418.m05031 homeodomain protein (BEL1) identical to... 29 3.9
At5g38800.1 68418.m04691 bZIP transcription factor family protei... 29 3.9
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 3.9
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 29 3.9
At3g61340.1 68416.m06864 F-box family protein contains F-box dom... 29 3.9
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 29 3.9
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 29 3.9
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 29 3.9
At1g06190.1 68414.m00651 expressed protein 29 3.9
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 28 5.1
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 28 5.1
At5g49880.1 68418.m06177 mitotic checkpoint family protein simil... 28 5.1
At5g08410.1 68418.m00990 ferredoxin-thioredoxin reductase, putat... 28 5.1
At3g61860.1 68416.m06947 arginine/serine-rich splicing factor RS... 28 5.1
At2g42560.1 68415.m05267 late embryogenesis abundant domain-cont... 28 5.1
At1g66480.1 68414.m07552 expressed protein 28 5.1
At1g30050.1 68414.m03674 hypothetical protein 28 5.1
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 28 5.1
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 28 6.8
At4g10760.1 68417.m01756 methyltransferase MT-A70, putative simi... 28 6.8
At3g49055.1 68416.m05359 hypothetical protein 28 6.8
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 28 6.8
At3g08790.1 68416.m01021 VHS domain-containing protein / GAT dom... 28 6.8
At2g30530.1 68415.m03718 expressed protein 28 6.8
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 28 6.8
At5g64710.2 68418.m08135 expressed protein contains Pfam profile... 27 9.0
At5g64710.1 68418.m08134 expressed protein contains Pfam profile... 27 9.0
At5g55520.1 68418.m06915 expressed protein weak similarity to ph... 27 9.0
At5g16270.1 68418.m01900 Rad21/Rec8-like family protein weak sim... 27 9.0
At4g25410.1 68417.m03655 basix helix-loop-helix (bHLH) family pr... 27 9.0
At4g21560.3 68417.m03116 vacuolar protein sorting-associated pro... 27 9.0
At4g21560.2 68417.m03115 vacuolar protein sorting-associated pro... 27 9.0
At4g21560.1 68417.m03114 vacuolar protein sorting-associated pro... 27 9.0
At1g67540.1 68414.m07695 expressed protein ; expression supporte... 27 9.0
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 27 9.0
At1g18190.1 68414.m02262 expressed protein similar to golgin-84 ... 27 9.0
>At2g20470.1 68415.m02390 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 596
Score = 34.3 bits (75), Expect = 0.078
Identities = 27/114 (23%), Positives = 52/114 (45%)
Frame = +2
Query: 155 KGFSG*EEHRSYRSWIGRSSGNDGSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAA 334
KG+ + R + G S G G G + S A++ + T + + ++AAA
Sbjct: 5 KGWFQKRQMRGGSRYKGASGGAGGGGSNGS---ADEHNVETDEEAVSNTT---KQKVAAA 58
Query: 335 QQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPM 496
+Q+++ + ++ +E K M + D+D++EE +N EKK + M
Sbjct: 59 KQYIENHYKEQMKILQERKERRSMLEQKLADADVSEEDQNNLLKFLEKKETEYM 112
>At1g32530.1 68414.m04014 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger); weak similarity to
interaptin (GI:3549261) [Dictyostelium discoideum] weak
similarity to Axoneme-associated protein mst101(2)
(Swiss-Prot:Q08696) [Drosophila hydei]
Length = 711
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 254 AEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLE 400
AEK+K++ + L Q + ++ A +Q +A E+ +AQ+EEE + E
Sbjct: 517 AEKEKIKALYKTLAQITEYEKEIEAKWRQEQKAKEEALAQMEEEQRSKE 565
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 278 QVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENK 391
Q+ L ++ A +ELA Q+H+ A ++ + +LE EN+
Sbjct: 651 QILILARQQAQREEELAQTQRHILALQEEIEELERENR 688
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 278 QVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENK 391
Q+ L ++ A +ELA Q+H+ A ++ + +LE EN+
Sbjct: 651 QILILARQQAQREEELAQTQRHILALQEEIEELERENR 688
>At5g03720.1 68418.m00332 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 412
Score = 32.3 bits (70), Expect = 0.32
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 209 SSGNDGSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEEN 388
SS + G SP+ E +KLR + R L +E L+ + +H+ QR+ E+
Sbjct: 156 SSTSQSQG-SPTEVGGEIEKLRKERRALMEEMVELQQQSRGTARHVDTVNQRLKAAEQRQ 214
Query: 389 KH-LEFMASI 415
K L F+A +
Sbjct: 215 KQLLSFLAKL 224
>At4g27180.1 68417.m03904 kinesin-like protein B (KATB)
Length = 745
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 305 AWLRDELAAAQQHLQASEQRVAQLEEENKHL-EFMASIRKYDSDINEESDS--NRTGQGE 475
A + +ELA Q LQ + QR+ + + K L E+ +S++ Y+S + + D +GE
Sbjct: 162 AAITEELAKTQGELQTANQRIQAVNDMYKLLQEYNSSLQLYNSKLQGDLDEAHENIKRGE 221
Query: 476 KKR 484
K+R
Sbjct: 222 KER 224
>At3g23310.1 68416.m02940 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 568
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = +2
Query: 191 RSWIGR--SSGNDGSGISPSVRRAE-KQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQ 361
R+W+ + S G + S R K+ +T N + + AAA+Q+++ +
Sbjct: 5 RAWLKKLKSKGKEKSSNKKETSRGNVKEGSKTAGGEEAVSNV-TKQKAAAAKQYIENHYK 63
Query: 362 RVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPMVELFLTMTTDD 529
+ Q +++ K M + ++++EE N EKK + M M TDD
Sbjct: 64 KQVQSQQQRKERRDMLENKLAAAEVSEEEQKNLLKDLEKKETEYMRRQRHKMGTDD 119
>At1g01660.1 68414.m00084 U-box domain-containing protein
Length = 568
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +2
Query: 347 QASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPMVE 502
+A E+ V + + EN +E + S R+Y++ NEE+ + G+ ++ MVE
Sbjct: 243 EAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVE 294
>At5g01970.1 68418.m00116 expressed protein
Length = 351
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 320 ELAAAQQHLQASEQRVAQLEEENKHL 397
EL + L +++R AQLEEENKHL
Sbjct: 209 ELKTVKADLAFAKERCAQLEEENKHL 234
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 31.1 bits (67), Expect = 0.73
Identities = 25/101 (24%), Positives = 47/101 (46%)
Frame = +2
Query: 191 RSWIGRSSGNDGSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVA 370
+S + SS GSG S +A ++ + + + +D A+++ +AS + +
Sbjct: 695 QSKMDNSSAKKGSGAGSSKAKATPASKSSKTSQDDKTASKSKDSKEASREE-EASSEEES 753
Query: 371 QLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDP 493
+ EE K + S R DI+ S S ++ KK+E+P
Sbjct: 754 EEEEPPKTVGKSGSSRS-KKDISSVSKSGKSKASSKKKEEP 793
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 356 EQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPMVELFLT-MTTDDN 532
E ++ + E E+ ++ A + K DSDI EE++ + P V+ +T T+ +N
Sbjct: 356 EHQIEEKENESSSVK-QADLSK-DSDIKEETEPAELLDSKDVLTSPPVDSSVTAATSSEN 413
Query: 533 RNNKSM 550
NKS+
Sbjct: 414 EKNKSV 419
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 31.1 bits (67), Expect = 0.73
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 3 KIIESLGRMTAMTQEEMVAGA---RTVAAGLEALRAEHTQLLAGLATNTEHENEKASLVK 173
K++ES+ TQ E V +T + ++ L +E T+L L N + E EK +K
Sbjct: 398 KLVESIKSDLETTQGEKVRALLNEKTATSQIQNLLSEKTELATELE-NCKKEEEK---IK 453
Query: 174 KSIEAIDLGLGEAQV 218
K++E++ L L E V
Sbjct: 454 KAMESLTLDLQEVSV 468
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/67 (19%), Positives = 33/67 (49%)
Frame = +2
Query: 224 GSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEF 403
G+G+ + + +K Q+ RL ++ A D+L +++ + + +++ + H E
Sbjct: 85 GTGLLVQQTQEDLRKANEQIERLKKDKAKALDDLKESEKLTKEANEKLREALAAQHHAEK 144
Query: 404 MASIRKY 424
+ I K+
Sbjct: 145 SSEIEKF 151
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 31.1 bits (67), Expect = 0.73
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 530 NRNNKSMSPDARRCTSPSK*TPGTEIPGPPAHASQPGHTGPRRKARYQGP 679
+R +S SP ARR SPS P PPA + T P R+ R P
Sbjct: 307 SRRRRSPSPPARRRRSPSPPARRRRSPSPPARRHR-SPTPPARQRRSPSP 355
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 533 RNNKSMSPDARRCTSPSK*TPGTEIPGPPA--HASQPGHTGPRRKARYQGP 679
R +S SP ARR SP+ P PPA H S P P R+ R P
Sbjct: 328 RRRRSPSPPARRHRSPTPPARQRRSPSPPARRHRSPP----PARRRRSPSP 374
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +2
Query: 473 EKKREDPMVELFLTMTTDDNRNNKSMSPDARRCTSPSK*TPGTEIPGPPAHASQPGHTGP 652
E +R+ P + R +S SP ARR SPS P PPA + + P
Sbjct: 298 EGRRQSPAPSRRRRSPSPPARRRRSPSPPARRRRSPSPPARRHRSPTPPAR-QRRSPSPP 356
Query: 653 RRKARYQGP 679
R+ R P
Sbjct: 357 ARRHRSPPP 365
>At1g67170.1 68414.m07641 expressed protein similar to
enterophilin-2L (GI:12718845) [Cavia porcellus]; similar
to Hyaluronan mediated motility receptor (Intracellular
hyaluronic acid binding protein) (Receptor for
hyaluronan-mediated motility) (CD168 antigen)
(Swiss-Prot:O75330) [Homo sapiens]
Length = 359
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 248 RRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQL--EEENKHLEFMASIRK 421
+ E Q+L + +RL + LR ELAAAQ +Q ++ + E E + + + K
Sbjct: 65 QHGELQRLAIENQRLGGTHGSLRQELAAAQHEIQMLHAQIGSMKSEREQRMMGLAEKVAK 124
Query: 422 YDSDINE 442
++++ +
Sbjct: 125 METELQK 131
>At4g26660.1 68417.m03841 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333
Length = 806
Score = 30.7 bits (66), Expect = 0.96
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 251 RAEKQKLRTQVR---RLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLE 400
+ E + LRTQ+R Q L L ++Q LQ SE+R + +EEE + L+
Sbjct: 676 KKENKNLRTQLRDTAEAVQAAGELLVRLRESEQALQVSEERFSVVEEEKERLK 728
>At3g63350.1 68416.m07129 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 282
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 257 EKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHL 397
E +LR + L E + LR E A+ ++QA EQR+ E++ +H+
Sbjct: 142 ELPQLREERHVLMMEISTLRQEEQRARGYVQAMEQRINGAEKKQRHM 188
>At2g27920.1 68415.m03384 serine carboxypeptidase S10 family protein
similar to retinoid-inducible serine carboxypeptidase
precursor (GI:15146429) [Mus musculus]
Length = 461
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 595 GYRDPRPACARFTTWSYRTPSQGPVPGSPWPLL 693
GY + RP F W Y++P + P PWP++
Sbjct: 37 GYVEVRPKAHMFW-WHYKSPYRVENPSKPWPII 68
>At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-containing
protein low similarity to SP|Q27974 Auxilin {Bos taurus};
contains Pfam profile PF00226: DnaJ domain
Length = 1448
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 359 QRVAQLEEENKHLEFMASIRKYD-SDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNR 535
Q +++L E N+H + A + +YD S+ + + R Q +++ E+ M++ ++ TD +R
Sbjct: 886 QGLSELNEINEHADSHAEMLEYDRSETDSNNSRERFDQTQEQAEETMID--GSIDTDTSR 943
Query: 536 NNKSM 550
++ M
Sbjct: 944 SSFEM 948
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +3
Query: 42 QEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEHENEKASLVKKSIEAIDLGLGEAQVM 221
+ EMV +T+ ++L+ EH +LL + + E+ + +S E +L G
Sbjct: 232 ENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDH---IFARSQELAELEKGLDTAK 288
Query: 222 TALASHLQSVEQRSKNSARRSAGCAKR 302
T ++ E + N A CAKR
Sbjct: 289 TTFEEERKAFEDKKSNLEIALALCAKR 315
>At4g25730.1 68417.m03703 FtsJ-like methyltransferase family protein
contains Pfam profile: PF01728 FtsJ-like
methyltransferase
Length = 821
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 EKQKLRTQVRRLCQE--NAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDS 430
E+QK Q+ + ++ ++ + +A+Q +A + +LEE + E YDS
Sbjct: 453 ERQKYTEQMEEIFEQAYERYMVKKEGSAKQRKRARQAHAEKLEEGDGDEEMKID---YDS 509
Query: 431 DINEESD 451
D+NEE D
Sbjct: 510 DMNEEKD 516
>At4g02800.1 68417.m00380 expressed protein similar to A. thaliana
hypothetical protein T6B20.12 (1946366)
Length = 333
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 239 PSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLE--FMAS 412
P R+ K+ + + N+ R EL + L ++R LEEENK L F+
Sbjct: 172 PKERKIMKKAKNIAISMAAKANSLAR-ELKTIKSDLSFIQERCGLLEEENKRLRDGFVKG 230
Query: 413 IRKYDSDI 436
+R + D+
Sbjct: 231 VRPEEDDL 238
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 341 HLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPM 496
+L+A + + Q EE+ + E RK++SD+ + DS+ + K M
Sbjct: 127 NLKADQIQRQQKEEDEEEEESKGKKRKHESDVEQTEDSSNEEEKRPKERKIM 178
>At1g22060.1 68414.m02759 expressed protein
Length = 1999
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 221 DGSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQ-ASEQRVAQLEEENKHL 397
D S +S + EKQKL +++ +++ + EL + + +Q S Q+ ++EE ++
Sbjct: 1671 DCSLLSLECCKEEKQKLEAILQQCKEQSLKMSKELESRRGLVQRCSSQKNIEMEENDRLN 1730
Query: 398 EFMASIRKYDSDINEESDSNRTGQGEKKREDPMVEL 505
++ + ++ DS GQ E DP V +
Sbjct: 1731 SEVSELADKNTIAVSSGDSVNNGQREVACIDPTVRI 1766
>At1g06210.1 68414.m00654 VHS domain-containing protein / GAT
domain-containing protein weak similarity to SP|Q9UJY5
ADP-ribosylation factor binding protein GGA1 {Homo
sapiens}; contains Pfam profiles PF00790: VHS domain,
PF03127: GAT domain
Length = 383
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 371 QLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEK-KREDPMVELFLTMTTDD 529
Q+E LE ++S+ + N D EK K+ P++++ + TTDD
Sbjct: 231 QIEITRNSLELLSSMLNTEGKPNHTEDDLTVSLMEKCKQSQPLIQMIIESTTDD 284
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +2
Query: 341 HLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPMVELFLTMT 520
H+Q +EQ Q+E +++H +F+A I + + + ++ N + E + +L+ +
Sbjct: 445 HVQLTEQSHLQIEFDHQHNQFVAEISQLRASYSAVTERNDSLAEE--LSECQSKLYAATS 502
Query: 521 TDDNRNNKSMSPDAR 565
++ N N+ ++ +A+
Sbjct: 503 SNTNLENQLLATEAQ 517
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 494 SGPRVSSRPDLYGYCP--TLRLCRCRIYVWKP*TPNAYSPPPA 372
S P V S P Y Y P + + + YV+ P AYSPPP+
Sbjct: 59 SPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPS 101
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 494 SGPRVSSRPDLYGYCP--TLRLCRCRIYVWKP*TPNAYSPPPA 372
S P V S P Y Y P + + + YV+ P AYSPPP+
Sbjct: 83 SPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPS 125
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 494 SGPRVSSRPDLYGYCP--TLRLCRCRIYVWKP*TPNAYSPPPA 372
S P V S P Y Y P + + + YV+ P AYSPPP+
Sbjct: 225 SPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPS 267
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 494 SGPRVSSRPDLYGYCP--TLRLCRCRIYVWKP*TPNAYSPPPA 372
S P V S P Y Y P + + + YV+ P AYSPPP+
Sbjct: 249 SPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPS 291
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 494 SGPRVSSRPDLYGYCP--TLRLCRCRIYVWKP*TPNAYSPPPA 372
S P V S P Y Y P + + + YV+ P AYSPPP+
Sbjct: 273 SPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPS 315
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 494 SGPRVSSRPDLYGYCP--TLRLCRCRIYVWKP*TPNAYSPPPA 372
S P V S P Y Y P + + + YV+ P AYSPPP+
Sbjct: 297 SPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPS 339
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 494 SGPRVSSRPDLYGYCP--TLRLCRCRIYVWKP*TPNAYSPPPA 372
S P V S P Y Y P + + + YV+ P AYSPPP+
Sbjct: 321 SPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPS 363
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 494 SGPRVSSRPDLYGYCP--TLRLCRCRIYVWKP*TPNAYSPPP 375
S P V S P Y Y P + + + YV+ P AYSPPP
Sbjct: 170 SPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPP 211
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 488 PRVSSRPDLYGYCP--TLRLCRCRIYVWKP*TPNAYSPPPA 372
P V S P Y Y P + + + YV+ P AYSPPP+
Sbjct: 37 PYVYSSPPPYTYSPPPSPYVYKSPPYVYSSPPPYAYSPPPS 77
>At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to Chain A,
Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid
Myeloid Leukaemia Protein, Pi(4,5)p2 Complex
(GP:13399999) {Homo sapiens}; supporting cDNA
gi|26451912|dbj|AK118440.1|
Length = 611
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/90 (26%), Positives = 46/90 (51%)
Frame = +2
Query: 233 ISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMAS 412
++ S E +K+ TQ ++L + ++RD+ A A Q ++S +R + EEE E+
Sbjct: 303 VARSSEYPELEKI-TQ-KKLDLMDEFIRDKSALAAQTTKSSSKRSNKSEEEESKTEY--- 357
Query: 413 IRKYDSDINEESDSNRTGQGEKKREDPMVE 502
I++ D+N Q E++ E+ +E
Sbjct: 358 IQENQEDLNSIKALPAPEQKEEEEEEEKME 387
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 260 KQKLRTQVRRLCQENAWLRDEL 325
K +L T++ R CQE LRDEL
Sbjct: 80 KDELETELARYCQEKTGLRDEL 101
>At2g35530.1 68415.m04352 bZIP transcription factor family protein
contains Pfam domain PF00170: bZIP transcription factor;
similar to G-Box binding protein 2 (GI:5381313)
[Catharanthus roseus].
Length = 409
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/103 (22%), Positives = 47/103 (45%)
Frame = +2
Query: 173 EEHRSYRSWIGRSSGNDGSGISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQA 352
++ R + + S + + S ++AE +L + L +EN LR E+ + +
Sbjct: 301 QDDRELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNEENTNLRAEINKLKSQCEE 360
Query: 353 SEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKK 481
L+++ + I D+D ++E D+N+TG E+K
Sbjct: 361 LTTENTSLKDQLSLFPPLEGI-SMDND-HQEPDTNQTGAAERK 401
>At2g03630.1 68415.m00323 hypothetical protein
Length = 252
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +2
Query: 383 ENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKSMSPDA 562
E+KH E + S +K+D D+N++ + + + P+ E T+ + +++ S +
Sbjct: 2 ESKHEEHVLSKQKHDQDVNKKGSLDDENGDVEHKTIPLQET-ETVIINSESHSRLSSSSS 60
Query: 563 RRCTSPSK*TPGTEIP 610
+S S +P ++P
Sbjct: 61 SSSSSSSYLSPPKDLP 76
>At2g02790.1 68415.m00222 calmodulin-binding family protein very low
similarity to SP|P12036 Neurofilament triplet H protein
{Homo sapiens}; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 636
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +2
Query: 257 EKQKLRTQVRRLCQENAWLRDELA-AAQQHLQASEQRVAQLEE-ENKHLEFMASIRKYDS 430
+K L + + +++A + E+A A Q+ L E V+ ++ E++ + + +S
Sbjct: 357 KKASLSNGIGKATRKSAEKKKEIADAVQKELPIEEVSVSLVDAPEDEKMNLIPVTISKES 416
Query: 431 DINEESDS---NRTGQGEKK---REDPMVELFLTMTTDDNRNNKSMSPDAR 565
D++++ S ++ Q E + R+D E T DD+ K PDA+
Sbjct: 417 DLDKDEKSLVLDKPEQDELRTAERDDKAEEELKTAERDDSAEEKIQEPDAQ 467
>At1g45249.2 68414.m05192 ABA-responsive element-binding protein 1
(AREB1) identical to ABA-responsive element binding
protein 1 (AREB1) [Arabidopsis thaliana] GI:9967417
Length = 416
Score = 29.1 bits (62), Expect = 2.9
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Frame = +2
Query: 200 IGRSSGNDGSGISPS-------VRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQAS- 355
IG+S+G D S +SPS VR + + V R + R+ A ++ QA
Sbjct: 303 IGKSNG-DSSSLSPSPYMFNGGVRGRKSGTVEKVVERRQRRMIKNRESAARSRARKQAYT 361
Query: 356 ---EQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKRE 487
E VA+L+EEN L+ R + N+E++ QG K++
Sbjct: 362 VELEAEVAKLKEENDELQ-RKQARIMEMQKNQETEMRNLLQGGPKKK 407
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +2
Query: 257 EKQKLRTQVRRLCQENAWLRDELA---AAQQHLQASEQRVAQLEEENKHLEFMASIRKYD 427
E+++L + R+ ++A +L + L+ ++ + EEE K L +
Sbjct: 66 EQKRLENEKRKQALKDAKDLKDLTYKTKVENKLKKTQPEKDRAEEEEKDLTEEKKKDPTE 125
Query: 428 SDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKSMSPDARRC 571
+ + ++ + E+K++DP E ++ K +S DAR C
Sbjct: 126 EEEKDPTEEKKKEPAEEKKKDPTEEKKKDPAEEEELEIKRISNDARFC 173
>At5g41410.1 68418.m05031 homeodomain protein (BEL1) identical to
cDNA homeobox protein (BEL1) GI:28202124
Length = 611
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 84 LEALRAEHTQLLAGLATNTEHENEKASLVKKSIEAIDLGLGEAQVMTALASHLQS 248
L+ +A+ +L L H E+ + + EA +GLG A++ TALAS S
Sbjct: 273 LQKRKAKLLSMLEELKRRYGHYREQMRVAAAAFEAA-VGLGGAEIYTALASRAMS 326
>At5g38800.1 68418.m04691 bZIP transcription factor family protein
similar to bZIP transcription factor GI:1769891 from
[Arabidopsis thaliana]; contains PFAM profile: bZIP
transcription factor PF00170
Length = 165
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 242 SVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHL-EFMASIR 418
S RR+ +K R QV L + WLRDE + L + ++ EEN L E ++
Sbjct: 83 SARRSRMRKQR-QVDELWSQVMWLRDENHQLLRKLNCVLESQEKVIEENVQLKEETTELK 141
Query: 419 KYDSDINEESDS 454
+ SD+ ++ S
Sbjct: 142 QMISDMQLQNQS 153
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 575 SPSK*TPGTEIPGPPAHASQPGHTGPRRKARYQGPRGPF 691
SPS TP + IP PP ++ P P + + P PF
Sbjct: 548 SPSSPTPSSPIPSPPTPSTPPTPISPGQNSPPIIPSPPF 586
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor 3
large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 28.7 bits (61), Expect = 3.9
Identities = 27/134 (20%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Frame = +2
Query: 242 SVRRAEKQKLRTQ----VRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMA 409
S R+AE ++RT+ + ++ +E RD +L+ E+R+ +L+EE + +
Sbjct: 759 SRRQAEFDRIRTEREERISKIIREKKQERDIKRKQIYYLKIEEERIRKLQEEEEARKQEE 818
Query: 410 SIRKYDSDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKSMSPDARRCTSPSK* 589
+ R + +++ ++ + +++RE +EL + + + R P+
Sbjct: 819 AERLKKVEAERKANLDKAFEKQRQRE---IELEEKSRREREELLRGTNAPPARLAEPTVT 875
Query: 590 TPGTEIPGPPAHAS 631
GT P A A+
Sbjct: 876 PVGTTAPAAAAAAA 889
>At3g61340.1 68416.m06864 F-box family protein contains F-box domain
Pfam:PF00646
Length = 410
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -1
Query: 211 ASPNPRSIASMLFLTREAFSFSCSVLVARPASSCVCSALRASSPAATVRAP 59
+SP+P+ ++ + +F SC + RP +C + ++ TV P
Sbjct: 87 SSPHPQDLSPIAANLHMSFPISCPSNICRPVRGWLCGLHQRTTKGTTVTEP 137
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 248 RRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEEN---KHLEFMASIR 418
R E+ K R + R+ +E A E A ++ + E+ +A+ EE K E + R
Sbjct: 494 REEEEAKRREEERKKREEEA----EQARKREEEREKEEEMAKKREEERQRKEREEVERKR 549
Query: 419 KYDSDINEESDSNRTGQGEKKREDPMVE 502
+ + + + R + E+KRE+ M +
Sbjct: 550 REEQERKRREEEARKREEERKREEEMAK 577
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +3
Query: 168 VKKSIEAIDLGLGEAQVMTALASHLQSVEQRSKNSARRSAGCAKRTPG*GTSWLQLSSTC 347
+KK IEA L + Q T S L+++ +S N + C P L + +C
Sbjct: 147 LKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQL--CKNPRPNPDIKTLFVDHSC 204
Query: 348 RLPNNA 365
RLPN+A
Sbjct: 205 RLPNDA 210
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +3
Query: 168 VKKSIEAIDLGLGEAQVMTALASHLQSVEQRSKNSARRSAGCAKRTPG*GTSWLQLSSTC 347
+KK IEA L + Q T S L+++ +S N + C P L + +C
Sbjct: 147 LKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQL--CKNPRPNPDIKTLFVDHSC 204
Query: 348 RLPNNA 365
RLPN+A
Sbjct: 205 RLPNDA 210
>At1g06190.1 68414.m00651 expressed protein
Length = 401
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = +2
Query: 305 AWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKR 484
A LR AA ++ + E Q +E + +RK+ + ++ S + QGE +
Sbjct: 142 AQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSKRQVSKFSSQGEVQG 201
Query: 485 ED-PMVELFLTMTTDDNRNNKSMSPDARRCTSPSK*TPGTEIPGPPAHASQ 634
+ + + T N++N + S R +S + +P PPA++S+
Sbjct: 202 DTVDKQDRTGNLVTSGNKDNNA-SSFTRPTSSFRRKSPVPRSQSPPAYSSE 251
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 467 QGEKKREDPMVELFLTMTTDDNRNNKSMSPDARRCTSPSK*TPGTEIPGPPAHASQPGHT 646
+G+ +P L+ D R N + P + SPS+ P GPP ++P +
Sbjct: 113 KGKLNGHNPKYLELLSSMLDIPRRNLATKPGSSPSPSPSR--PPKRSRGPPRPPTRP-KS 169
Query: 647 GPRRKARYQGPRGP 688
P RK+ + R P
Sbjct: 170 PPPRKSSFPPSRSP 183
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 467 QGEKKREDPMVELFLTMTTDDNRNNKSMSPDARRCTSPSK*TPGTEIPGPPAHASQPGHT 646
+G+ +P L+ D R N + P + SPS+ P GPP ++P +
Sbjct: 113 KGKLNGHNPKYLELLSSMLDIPRRNLATKPGSSPSPSPSR--PPKRSRGPPRPPTRP-KS 169
Query: 647 GPRRKARYQGPRGP 688
P RK+ + R P
Sbjct: 170 PPPRKSSFPPSRSP 183
>At5g49880.1 68418.m06177 mitotic checkpoint family protein similar
to mitotic checkpoint protein isoform MAD1a [Homo
sapiens] GI:4580767; contains Pfam profile PF05557:
Mitotic checkpoint protein
Length = 726
Score = 28.3 bits (60), Expect = 5.1
Identities = 30/107 (28%), Positives = 45/107 (42%)
Frame = +2
Query: 257 EKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDI 436
EK++L+ V L + N+ AA +Q E +A+ E K LE D+
Sbjct: 435 EKEQLKAVVNELRKSNSEGSVSGAADGALIQGFESSLAKKENYIKDLE---------QDL 485
Query: 437 NEESDSNRTGQGEKKREDPMVELFLTMTTDDNRNNKSMSPDARRCTS 577
N+ D N R+ +EL D+ R NKS+ D+ R S
Sbjct: 486 NQLKDVNN-------RQRTEIELLNEKLVDEARRNKSLERDSDRLRS 525
>At5g08410.1 68418.m00990 ferredoxin-thioredoxin reductase, putative
similar to ferredoxin-thioredoxin reductase, variable
chain (FTR-V, Ferredoxin- thioredoxin reductase subunit
A, FTR-A) [Zea mays] SWISS-PROT:P80680
Length = 184
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 395 NAYSPPPAVLRVVRKPAGAAELQPARPSARRSLGTA 288
N+Y+ PA++ VR PA L A S R+S+ ++
Sbjct: 3 NSYALSPAIIAAVRPPASQDYLVAASLSGRKSINSS 38
>At3g61860.1 68416.m06947 arginine/serine-rich splicing factor RSP31
(RSP31) identical to SP|P92964 Arginine/serine-rich
splicing factor RSP31 {Arabidopsis thaliana}
Length = 264
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 622 RRRAGDLGTRRSLAGRSASAGVGRHRFIIPVVVG 521
RRR+ D G R S GR S G R+R PV G
Sbjct: 229 RRRSPDYGRRSSDYGRQRSPGYDRYRSRSPVPRG 262
>At2g42560.1 68415.m05267 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to LEA protein [Glycine max]
GI:1389897; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 635
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +1
Query: 376 GGGE*AFGVHGFHT*IRQRHKRRVG----Q*PYRSGREETRGPDGRAVPDDDHRRQQE 537
GG E GVHGFH + RH + + R G+E G GR+V D + Q+
Sbjct: 181 GGEEKESGVHGFHG-EKARHAELLAAGGEEMREREGKESAGGVGGRSVKDTVAEKGQQ 237
>At1g66480.1 68414.m07552 expressed protein
Length = 225
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 200 IGRSSGNDGSG--ISPSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQ 373
IGRS G DG G + P + R+Q+ +L +EN D A A++ L +R +
Sbjct: 123 IGRSDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENN--NDASAIAEKILGIYMERSGE 180
Query: 374 L 376
L
Sbjct: 181 L 181
>At1g30050.1 68414.m03674 hypothetical protein
Length = 389
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 239 PSVRRAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHL 397
P+ R ++ + R + L EL + L +++R +QLEEENK L
Sbjct: 179 PNPRESQLKASRDVAMATAAKAKLLLRELKTVKADLAFAKERCSQLEEENKRL 231
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar
to U2 small nuclear ribonucleoprotein auxiliary factor
35 kD subunit related protein 1 (sp|Q15695)
Length = 757
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 356 EQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEKKREDPMVELF 508
E+ A+ EEE + + + +RK ++ N+E + G+ E E P +F
Sbjct: 112 EEEEAKREEEERRWKDLEELRKLEASGNDECGEDEDGEYEYIEEGPPEIIF 162
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 138 TEHENEKASLVKKSIEAIDLGLGEAQVMTALAS 236
TE +K+SL +K +++G G+AQV +A+ S
Sbjct: 145 TETFAKKSSLEEKVKRLVEMGFGDAQVRSAIES 177
>At4g10760.1 68417.m01756 methyltransferase MT-A70, putative similar
to (N6-adenosine)-methyltransferase [Mus musculus]
GI:10179948, m6A methyltransferase (MT-A70) [Homo
sapiens] GI:2460037; contains Pfam profile PF05063:
MT-A70 (S-adenosylmethionine-binding subunit of human
mRNA:m6A methyl-transferase (MTase))
Length = 685
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 362 VVRKPAGAAELQPARPSARRSLGTACGPACGVFASL 255
V+RK +PA +A R LG CGP V +L
Sbjct: 144 VLRKLENDQNARPAEKAALRDLGGECGPILAVETAL 179
>At3g49055.1 68416.m05359 hypothetical protein
Length = 480
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
Frame = +2
Query: 242 SVRRAEKQKLRTQVRRLCQENAWLRDELA--------AAQQHLQASEQRVAQLEEENKHL 397
+V ++E +KLR+ + R + L++ELA AA++ L+ +E+R+AQL +HL
Sbjct: 367 AVLKSEVEKLRSALAR-SEGKLKLKEELAKAAMVAEEAAEKSLRLAERRIAQLLSRIEHL 425
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 296 QENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDS 454
+E A + E++ ++ ++ R+ LE E HL D+D N++SD+
Sbjct: 249 EETAGKQSEVSLLMDEVERAQTRLLTLEREKGHLRSQLQTANEDTD-NKKSDN 300
>At3g08790.1 68416.m01021 VHS domain-containing protein / GAT
domain-containing protein weak similarity to
HGF-regulated tyrosine kinase substrate [Mus musculus]
GI:1089781; contains Pfam profiles PF00790: VHS domain,
PF03127: GAT domain
Length = 607
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 27 MTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEHENEKASLVKKSIEAIDLGLG 206
+ + + E M+ + L+ L A+H + +G + + E K + K + + ID+G
Sbjct: 232 VNSTSDESMLCQGLALNDDLQRLLAKHEAIASGNSMIKKEEKSKKEVPKDTTQIIDVGSS 291
Query: 207 EAQ 215
E +
Sbjct: 292 ETK 294
>At2g30530.1 68415.m03718 expressed protein
Length = 371
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 320 ELAAAQQHLQASEQRVAQLEEENKHL 397
EL + L ++QR AQLEEENK L
Sbjct: 249 ELKMVKSDLAFAKQRCAQLEEENKVL 274
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240: Ubiquitin
family
Length = 1919
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +2
Query: 284 RRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRT 463
RR ++ W +E + +H + +R ++ +A IR+Y+ I E +
Sbjct: 1675 RRPKEDRVWWEEEEISTGRHREVRARRDYDDMSVSEEPNEIAEIRRYEEVIRSEREEEER 1734
Query: 464 GQGEKKRE 487
+ +KK++
Sbjct: 1735 QKAKKKKK 1742
>At5g64710.2 68418.m08135 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 716
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 422 YDSDINEESDSNRTGQGEKKRED 490
YDS++ E++ S ++G KK+ED
Sbjct: 646 YDSEMEEKASSKQSGGERKKKED 668
>At5g64710.1 68418.m08134 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 841
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 422 YDSDINEESDSNRTGQGEKKRED 490
YDS++ E++ S ++G KK+ED
Sbjct: 771 YDSEMEEKASSKQSGGERKKKED 793
>At5g55520.1 68418.m06915 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333; expression supported
by MPSS
Length = 802
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 251 RAEKQKLRTQVR---RLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLE 400
+ E + L+ Q+R Q L L A+Q +Q+SE+R +EEEN L+
Sbjct: 667 KKENKGLKIQLRDTVEAVQAAGELLVRLREAEQAVQSSEERFGIMEEENDKLK 719
>At5g16270.1 68418.m01900 Rad21/Rec8-like family protein weak
similarity to cohesion family protein SYN2 [Arabidopsis
thaliana] GI:12006360; contains Pfam profiles PF04824:
Conserved region of Rad21 / Rec8 like protein, PF04825:
N terminus of Rad21 / Rec8 like protein; supporting cDNA
gi|18157648|gb|AF400129.1|AF400129
Length = 1031
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 546 RCRPTPADALRPASERRVPRSPARLRTLHNLVIQDPVARPG 668
+ RPTP L PA+ +R+ +P T +++ DP+ G
Sbjct: 533 KMRPTPV--LEPATTKRLRSAPRSTATKRKVLMDDPMVLHG 571
>At4g25410.1 68417.m03655 basix helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 221
Score = 27.5 bits (58), Expect = 9.0
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 167 G*EEHRSYRSWIGRSSGNDGSGISPSVRRAEKQK--LRTQVRRLCQENAWLRDELAAAQQ 340
G + R + S G S G+ GSG + +K+K L + R Q + A +
Sbjct: 11 GYQRQRPFSS-AGESGGSGGSGTAHETDDNKKKKKLLHRDIER--QRRQEMATLFATLRT 67
Query: 341 HLQAS--EQRVAQLEEENKHLEFMASIRKYDSDINEESD--SNRTGQGEKKREDP 493
HL + + A + N + F+ +++ D S TGQG K DP
Sbjct: 68 HLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDP 122
>At4g21560.3 68417.m03116 vacuolar protein sorting-associated
protein 28 family protein / VPS28 family protein
contains similarity to Swiss-Prot:Q02767 vacuolar
protein sorting-associated protein VPS28 [Saccharomyces
cerevisiae]
Length = 209
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 163 EAFSFSCSVLVARPASSCVCSAL--RASSPAATVRAPATISSCVIAVILPKDSI 8
E + CS V R +S V + + RA++ A+T + + ++ CV I DS+
Sbjct: 75 ETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQNFITSMDSL 128
>At4g21560.2 68417.m03115 vacuolar protein sorting-associated
protein 28 family protein / VPS28 family protein
contains similarity to Swiss-Prot:Q02767 vacuolar
protein sorting-associated protein VPS28 [Saccharomyces
cerevisiae]
Length = 209
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 163 EAFSFSCSVLVARPASSCVCSAL--RASSPAATVRAPATISSCVIAVILPKDSI 8
E + CS V R +S V + + RA++ A+T + + ++ CV I DS+
Sbjct: 75 ETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQNFITSMDSL 128
>At4g21560.1 68417.m03114 vacuolar protein sorting-associated
protein 28 family protein / VPS28 family protein
contains similarity to Swiss-Prot:Q02767 vacuolar
protein sorting-associated protein VPS28 [Saccharomyces
cerevisiae]
Length = 209
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 163 EAFSFSCSVLVARPASSCVCSAL--RASSPAATVRAPATISSCVIAVILPKDSI 8
E + CS V R +S V + + RA++ A+T + + ++ CV I DS+
Sbjct: 75 ETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQNFITSMDSL 128
>At1g67540.1 68414.m07695 expressed protein ; expression supported
by MPSS
Length = 232
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 365 VAQLEEENKHL--EFMASIRK-YDSDINEESDSNRTGQGEKKREDPMVELFLTMTTDDNR 535
V++ EEE ++L E S ++ + E TG+ R DP++ELF T +
Sbjct: 153 VSEEEEEKRNLGTEKKVSYKEALQRGSSGEDGGGSTGRSSSSRRDPILELFETGWIQNPI 212
Query: 536 NNKSMSPDA 562
S S D+
Sbjct: 213 KRSSRSADS 221
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +2
Query: 353 SEQRVAQLEEENKHLEFMASIRKYDSDINEES----DSNRTGQGEKKREDPMVEL 505
+E+ + EE+ K E +K D EE + N+ +GEKK+E+ VE+
Sbjct: 182 TEEEKKKEEEDKKKKEEEDKKKKEDEKKKEEEKKKEEENKKKEGEKKKEEVKVEV 236
>At1g18190.1 68414.m02262 expressed protein similar to golgin-84
{Homo sapiens} (GI:4191344)
Length = 668
Score = 27.5 bits (58), Expect = 9.0
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +2
Query: 260 KQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVAQLEEENKHLE-FMASIRKYDSDI 436
+ ++ T++ L ENA L LAA Q+ L+ +VA L+++ + E + +++ +I
Sbjct: 390 RMEVLTRLAGLEAENAELTRSLAAGQKKLETQIDQVAVLKQQVELKESTLEELKRNTFNI 449
Query: 437 NEESDSNR---TGQGEKKREDPMVELFLTMTTD 526
+ + T +G+ K E M+E +++ TD
Sbjct: 450 GGRGTTLKQLDTSRGD-KFEHQMLEAEISLLTD 481
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,104,862
Number of Sequences: 28952
Number of extensions: 336786
Number of successful extensions: 1568
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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