Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0162
(517 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 1.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 1.6
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 2.8
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 4.9
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 8.6
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 21 8.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 8.6
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 0.92
Identities = 9/41 (21%), Positives = 20/41 (48%)
Frame = -3
Query: 212 TTFFLRLGVPLPPMRTCEWSFFNFSLFIVLFLSVNCVNVKT 90
T F + +G + + W+ F +++ +LF + C K+
Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKS 966
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 0.92
Identities = 9/41 (21%), Positives = 20/41 (48%)
Frame = -3
Query: 212 TTFFLRLGVPLPPMRTCEWSFFNFSLFIVLFLSVNCVNVKT 90
T F + +G + + W+ F +++ +LF + C K+
Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKS 966
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.8 bits (49), Expect = 0.92
Identities = 9/41 (21%), Positives = 20/41 (48%)
Frame = -3
Query: 212 TTFFLRLGVPLPPMRTCEWSFFNFSLFIVLFLSVNCVNVKT 90
T F + +G + + W+ F +++ +LF + C K+
Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKS 966
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.8 bits (49), Expect = 0.92
Identities = 9/41 (21%), Positives = 20/41 (48%)
Frame = -3
Query: 212 TTFFLRLGVPLPPMRTCEWSFFNFSLFIVLFLSVNCVNVKT 90
T F + +G + + W+ F +++ +LF + C K+
Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKS 966
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 1.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +1
Query: 64 LNSVIKKCPVLTLTQFTLKNSTMNSEK 144
LN IKK P+ + FT+ +N +
Sbjct: 266 LNLTIKKMPIAIVAPFTIVEPKLNKHE 292
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 1.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +1
Query: 64 LNSVIKKCPVLTLTQFTLKNSTMNSEK 144
LN IKK P+ + FT+ +N +
Sbjct: 158 LNLTIKKMPIAIVAPFTIVEPKLNKHE 184
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 22.2 bits (45), Expect = 2.8
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +2
Query: 164 KYASAVRAHRDARRRLFTLLRPQMTKNCSHPQKVVSEHNSW 286
KY +A DA+ R ++ + + + + Q S++ SW
Sbjct: 195 KYNPFAKAFLDAKERPDSIYQREYSPTFTQQQTQYSQYGSW 235
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.4 bits (43), Expect = 4.9
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 512 PLEWLRRGNTRRNPFQSVQAVGSELAE 432
P +WL + RRN + S L+E
Sbjct: 323 PFKWLFKKKKRRNRESTTNTQSSSLSE 349
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 20.6 bits (41), Expect = 8.6
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -3
Query: 110 NCVNVKTGHFFMTLFSYYKTRQYE 39
+C N+ TG F ++ R YE
Sbjct: 391 SCSNILTGDQFYNFLNHNFDRHYE 414
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 431 PQPVRTRRLEPTE 469
PQP +T EPT+
Sbjct: 401 PQPTQTTESEPTQ 413
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.6 bits (41), Expect = 8.6
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -1
Query: 376 KVFAASHACAFGLLKCITVPSSLIIFTSSMPGI 278
K+ AAS GL K ++ +TS G+
Sbjct: 1155 KITAASETILHGLKKYTNYSMEVLAYTSGGDGV 1187
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,610
Number of Sequences: 336
Number of extensions: 2886
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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