Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0162
         (517 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.1  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   4.6  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.1  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.1  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   6.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.1  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   8.1  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 466 SRFKPS-GPNWLRIPGSIFVVCLFSPCPVIAKVFAASHA 353
           ++ KPS  P    IP ++   C  +  P++AK+F AS A
Sbjct: 551 AQLKPSFAPGPDGIPSTVLKRCQTTVAPILAKLFNASLA 589


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 191  GVPLPPMRTCEWSFFNFSLFIVLFLSV 111
            G PL P+R   W    F  F   +LSV
Sbjct: 1016 GEPLKPVRPMSWLLQYFVSFATYWLSV 1042


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 499 LGAATLDAILFSRFKPSGPNWLRIPGSIFVVCLFSPCPVIAKVFAAS 359
           + + T+  +LF   +   P    IP S+ + C     P +AK+F  S
Sbjct: 470 VSSETVVQVLFGLKRSFTPGPDGIPASVLINCKDVLAPHLAKIFNLS 516


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 382 IAKVFAASHACAFGLLKCITV 320
           + K+   SH+C FG   C TV
Sbjct: 508 LIKLAQHSHSCLFGTFLCNTV 528


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 382 IAKVFAASHACAFGLLKCITV 320
           + K+   SH+C FG   C TV
Sbjct: 508 LIKLAQHSHSCLFGTFLCNTV 528


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 88  PVLTLTQFTLKNSTMNSEKLKKLHSQVRIGGKGT 189
           P   +T FTL      +  L + +SQ+R G + T
Sbjct: 81  PAAGVTYFTLYQKVRLNPNLMEENSQIRRGNRST 114


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 143 FSLFIVLFLSVNCV 102
           FSLFI+  + VNC+
Sbjct: 154 FSLFIITTILVNCI 167


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 254 PQKVVSEHNSWHRRGKYDQRG 316
           P+    +++ + R G+YDQRG
Sbjct: 239 PRYDYDDNDGYSRGGQYDQRG 259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,400
Number of Sequences: 2352
Number of extensions: 12636
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)