Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0160
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.51 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   6.3  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 225 WHNGLIYKLYTWECQTDSCSSY 290
           ++N    + YTW+C+   C  Y
Sbjct: 35  FYNDFEVQRYTWKCENQKCVKY 56


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = -2

Query: 402  NNNGERAEPCGTPAVT*RGRERVPSTRHRNERFDK*SRMMSTSLSGTPMYT 250
            ++NG + E    P+V+     R P+  H        +   S+  SGTP  T
Sbjct: 899  HSNGAKEEDEDKPSVSPLTSPRQPAETHAGSPCRNSASPASSDRSGTPRST 949


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 485 CKKKALLHDDFRPQLPPWDSISRKWR 562
           C+K  L +DD    +P   S +R W+
Sbjct: 150 CQKHPLCNDDPNGNVPLGKSCNRYWQ 175


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 519 DRSYHHGTVFPGSGASTSTPRKAHR 593
           D   H G +  G+GA    P  AHR
Sbjct: 9   DDGIHPGYMDGGAGAGLYEPHVAHR 33


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
 Frame = -3

Query: 512 RHEATPSSYTSSRWRCHRRRAPD--GSPETG 426
           R  A P   T+ RW C R  +    G P  G
Sbjct: 42  RRAARPGVVTTPRWGCARASSATTMGGPRYG 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,242
Number of Sequences: 336
Number of extensions: 3577
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)