Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0160
(619 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 89 3e-18
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 89 3e-18
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 83 3e-16
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 74 2e-13
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 74 2e-13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 74 2e-13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 74 2e-13
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 70 3e-12
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 70 3e-12
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 69 5e-12
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 69 7e-12
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 69 7e-12
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 69 7e-12
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 69 7e-12
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 69 7e-12
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 69 7e-12
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 69 7e-12
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 65 6e-11
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 65 6e-11
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 62 6e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 61 1e-09
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 59 5e-09
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 53 3e-07
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 46 3e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 42 7e-04
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 33 0.31
AY060990-1|AAL28538.1| 461|Drosophila melanogaster HL01082p pro... 30 2.2
AF135119-1|AAD31715.1| 763|Drosophila melanogaster fat-spondin ... 30 2.2
AE013599-2411|AAM68494.2| 628|Drosophila melanogaster CG6953-PB... 30 2.2
AE013599-2409|AAF57910.1| 763|Drosophila melanogaster CG6953-PA... 30 2.2
AY122108-1|AAM52620.1| 593|Drosophila melanogaster GH12004p pro... 29 6.6
AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-P... 29 6.6
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 28 8.8
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/117 (35%), Positives = 71/117 (60%)
Frame = +2
Query: 257 MGVPDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSP 436
+G P L+ I++++L++R F + ++S R + AGVPQGS L P LF+++ +DIP++
Sbjct: 629 IGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQAT 688
Query: 437 ETHLALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSVLLQK 607
L+LFADD A+Y + + ++ + L D +KW+I INP K+ ++ K
Sbjct: 689 NCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTK 745
Score = 48.4 bits (110), Expect = 8e-06
Identities = 25/82 (30%), Positives = 46/82 (56%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ K+ E+L++ RL F+ + L ++GFR + + +L +I + ++ + G
Sbjct: 547 LSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSV--G 604
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
+ DI AFD VWH+GL++KL
Sbjct: 605 LVTLDIEAAFDTVWHDGLLHKL 626
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/117 (35%), Positives = 71/117 (60%)
Frame = +2
Query: 257 MGVPDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSP 436
+G P L+ I++++L++R F + ++S R + AGVPQGS L P LF+++ +DIP++
Sbjct: 577 IGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQAT 636
Query: 437 ETHLALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSVLLQK 607
L+LFADD A+Y + + ++ + L D +KW+I INP K+ ++ K
Sbjct: 637 NCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTK 693
Score = 48.4 bits (110), Expect = 8e-06
Identities = 25/82 (30%), Positives = 46/82 (56%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ K+ E+L++ RL F+ + L ++GFR + + +L +I + ++ + G
Sbjct: 495 LSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSV--G 552
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
+ DI AFD VWH+GL++KL
Sbjct: 553 LVTLDIEAAFDTVWHDGLLHKL 574
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 83.0 bits (196), Expect = 3e-16
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +3
Query: 3 AIGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPT 182
++ KL+ERL+ RL D + +IL D +FGFR HS V QVHRLT+HIL + ++
Sbjct: 522 SLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKE--YC 579
Query: 183 GALFFDIAKAFDKVWHNGLIYKL 251
A+F D+ +AFD+VWH+GLI K+
Sbjct: 580 NAVFIDMQQAFDRVWHDGLISKV 602
Score = 68.1 bits (159), Expect = 9e-12
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Frame = +2
Query: 284 IIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETH------ 445
+++ YL +R F RV + S PR + AGVPQGS L PLL+S++ D+P H
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRK 672
Query: 446 --LALFADDTAIYYS---CKKKALLHDDFRPQLPPWDSISRKWRIDINPTKS 586
LA +ADD A+ YS C + A ++ L W ++W + +NP K+
Sbjct: 673 ALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAW---CKRWILKVNPQKT 721
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ KL ER+L KRL+D K + +FGFR H HQ+ R+T+ IL + +
Sbjct: 123 LSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--VCS 180
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A F DI +AFD+VWH+GL+YKL
Sbjct: 181 ATFLDITEAFDRVWHDGLLYKL 202
Score = 66.5 bits (155), Expect = 3e-11
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 17/129 (13%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVEG-TRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L ++ +YLSNR+F R++G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 206 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 265
Query: 428 -------RSPETH-----LALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDI 571
P+ H LA +ADDT I K L + + L + S+KW I I
Sbjct: 266 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 325
Query: 572 NPTKSTSVL 598
N K+ +L
Sbjct: 326 NAKKTGHIL 334
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ KL ER+L KRL+D K + +FGFR H HQ+ R+T+ IL + +
Sbjct: 570 LSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--VCS 627
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A F DI +AFD+VWH+GL+YKL
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKL 649
Score = 66.5 bits (155), Expect = 3e-11
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 17/129 (13%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVEG-TRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L ++ +YLSNR+F R++G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 428 -------RSPETH-----LALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDI 571
P+ H LA +ADDT I K L + + L + S+KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 572 NPTKSTSVL 598
N K+ +L
Sbjct: 773 NAKKTGHIL 781
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ KL ER+L KRL+D K + +FGFR H HQ+ R+T+ IL + +
Sbjct: 570 LSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--VCS 627
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A F DI +AFD+VWH+GL+YKL
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKL 649
Score = 66.5 bits (155), Expect = 3e-11
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 17/129 (13%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVEG-TRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L ++ +YLSNR+F R++G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 428 -------RSPETH-----LALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDI 571
P+ H LA +ADDT I K L + + L + S+KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 572 NPTKSTSVL 598
N K+ +L
Sbjct: 773 NAKKTGHIL 781
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ KL ER+L KRL+D K + +FGFR H HQ+ R+T+ IL + +
Sbjct: 570 LSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--VCS 627
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A F DI +AFD+VWH+GL+YKL
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKL 649
Score = 66.5 bits (155), Expect = 3e-11
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 17/129 (13%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVEG-TRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L ++ +YLSNR+F R++G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 428 -------RSPETH-----LALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDI 571
P+ H LA +ADDT I K L + + L + S+KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 572 NPTKSTSVL 598
N K+ +L
Sbjct: 773 NAKKTGHIL 781
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 69.7 bits (163), Expect = 3e-12
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Frame = +2
Query: 266 PDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIP-RSPET 442
P +L L+++ +L R+F V+G +S + + AGVPQGS L P L+S++ +D+P +P T
Sbjct: 608 PPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVT 667
Query: 443 H-------LALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
+A +ADDTA+ K + L + + W + IN K +V
Sbjct: 668 EVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANV 725
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +3
Query: 3 AIGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPT 182
++GK+ ERL+ RL K + +FGFR +H Q+HR+ L + K
Sbjct: 523 SLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM-ENKEYAV 581
Query: 183 GALFFDIAKAFDKVWHNGLIYK 248
GA F DI +AFD+VWH GL+YK
Sbjct: 582 GA-FLDIQQAFDRVWHPGLLYK 602
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 69.7 bits (163), Expect = 3e-12
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Frame = +2
Query: 266 PDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIP-RSPET 442
P +L L+++ +L R+F V+G +S + + AGVPQGS L P L+S++ +D+P +P T
Sbjct: 410 PPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVT 469
Query: 443 H-------LALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
+A +ADDTA+ K + L + + W + IN K +V
Sbjct: 470 EVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANV 527
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +3
Query: 3 AIGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPT 182
++GK+ ERL+ RL K + +FGFR +H Q+HR+ L + K
Sbjct: 325 SLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM-ENKEYAV 383
Query: 183 GALFFDIAKAFDKVWHNGLIYK 248
GA F DI +AFD+VWH GL+YK
Sbjct: 384 GA-FLDIQQAFDRVWHPGLLYK 404
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 68.9 bits (161), Expect = 5e-12
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ K++ERLL KRL+ K + +FGFR H Q+ R+T+ IL R++
Sbjct: 567 LSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERKE--YCS 624
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A+F DI++AFD+VWH GL+ KL
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKL 646
Score = 62.5 bits (145), Expect = 4e-10
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L +I+ YL+NR+F + + G SR + AGVPQGS L PLL+S++ +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYI 709
Query: 428 --RSPETHLAL--FADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
SP + L +ADDT + S + L + + KW I +N K+ V
Sbjct: 710 YRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHV 769
Query: 596 L 598
+
Sbjct: 770 I 770
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ K++ERLL KRL+ K + +FGFR H Q+ R+T+ IL R++
Sbjct: 451 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCS 508
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A+F DI++AFD+VWH GL+ KL
Sbjct: 509 AVFLDISEAFDRVWHEGLLLKL 530
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L +I+ YL+NR+F + + G SR + AGVPQGS L P+L+S++ +D+P
Sbjct: 534 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 593
Query: 428 --RSPETHLAL--FADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
SP + L +ADDT + S + L + + KW I +N K+ V
Sbjct: 594 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 653
Query: 596 L 598
+
Sbjct: 654 I 654
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ K++ERLL KRL+ K + +FGFR H Q+ R+T+ IL R++
Sbjct: 579 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCS 636
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A+F DI++AFD+VWH GL+ KL
Sbjct: 637 AVFLDISEAFDRVWHEGLLLKL 658
Score = 62.5 bits (145), Expect = 4e-10
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L +I+ YL+NR+F + + G SR + AGVPQGS L PLL+S++ +D+P
Sbjct: 662 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYI 721
Query: 428 --RSPETHLAL--FADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
SP + L +ADDT + S + L + + KW I +N K+ V
Sbjct: 722 YRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 781
Query: 596 L 598
+
Sbjct: 782 I 782
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ K++ERLL KRL+ K + +FGFR H Q+ R+T+ IL R++
Sbjct: 567 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCS 624
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A+F DI++AFD+VWH GL+ KL
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKL 646
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L +I+ YL+NR+F + + G SR + AGVPQGS L P+L+S++ +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 428 --RSPETHLAL--FADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
SP + L +ADDT + S + L + + KW I +N K+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 596 L 598
+
Sbjct: 770 I 770
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ K++ERLL KRL+ K + +FGFR H Q+ R+T+ IL R++
Sbjct: 567 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCS 624
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A+F DI++AFD+VWH GL+ KL
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKL 646
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L +I+ YL+NR+F + + G SR + AGVPQGS L P+L+S++ +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 428 --RSPETHLAL--FADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
SP + L +ADDT + S + L + + KW I +N K+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 596 L 598
+
Sbjct: 770 I 770
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ K++ERLL KRL+ K + +FGFR H Q+ R+T+ IL R++
Sbjct: 529 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCS 586
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A+F DI++AFD+VWH GL+ KL
Sbjct: 587 AVFLDISEAFDRVWHEGLLLKL 608
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L +I+ YL+NR+F + + G SR + AGVPQGS L P+L+S++ +D+P
Sbjct: 612 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 671
Query: 428 --RSPETHLAL--FADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
SP + L +ADDT + S + L + + KW I +N K+ V
Sbjct: 672 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 731
Query: 596 L 598
+
Sbjct: 732 I 732
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ K++ERLL KRL+ K + +FGFR H Q+ R+T+ IL R++
Sbjct: 567 LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCS 624
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A+F DI++AFD+VWH GL+ KL
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKL 646
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP---- 427
+P L +I+ YL+NR+F + + G SR + AGVPQGS L P+L+S++ +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 428 --RSPETHLAL--FADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
SP + L +ADDT + S + L + + KW I +N K+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 596 L 598
+
Sbjct: 770 I 770
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 68.5 bits (160), Expect = 7e-12
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Frame = +2
Query: 284 IIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSP-----ETHL 448
+++ YL R F R S +V AGVPQGS L PLL+ LY +D+P+ ++ L
Sbjct: 612 LLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSML 671
Query: 449 ALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
A FADD + Y + + D + + +R+W I IN +KS +V
Sbjct: 672 ATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNV 720
Score = 67.7 bits (158), Expect = 1e-11
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +3
Query: 3 AIGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPT 182
+I K++ERL+ R+ + A I + +FGFRA H V Q+HR+ E IL + ++
Sbjct: 521 SISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKE--YC 578
Query: 183 GALFFDIAKAFDKVWHNGLIYKL 251
+LF DI +AFD+VWH GL K+
Sbjct: 579 NSLFLDIREAFDRVWHIGLQLKI 601
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 65.3 bits (152), Expect = 6e-11
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ KL+E++L R+ + N L +FGFR +H + QV+R+T I R+
Sbjct: 518 LSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCT-- 575
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A+F D+A+AFD+VW +GL++K+
Sbjct: 576 AIFLDVAQAFDRVWLDGLLFKI 597
Score = 64.5 bits (150), Expect = 1e-10
Identities = 39/111 (35%), Positives = 51/111 (45%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPET 442
+P +++ YL NR F R + + SR + AGVPQGS L P+L++LY D P
Sbjct: 601 LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 443 HLALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
+ FADDTAI K L + WRI IN K V
Sbjct: 661 TTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQV 711
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 65.3 bits (152), Expect = 6e-11
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ KL+E++L R+ + N L +FGFR +H + QV+R+T I R+
Sbjct: 518 LSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCT-- 575
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A+F D+A+AFD+VW +GL++K+
Sbjct: 576 AIFLDVAQAFDRVWLDGLLFKI 597
Score = 62.1 bits (144), Expect = 6e-10
Identities = 38/111 (34%), Positives = 50/111 (45%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPET 442
+P +++ YL N F R + + SR + AGVPQGS L P+L++LY D P
Sbjct: 601 LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 443 HLALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
+ FADDTAI K L + WRI IN K V
Sbjct: 661 TTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQV 711
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 62.1 bits (144), Expect = 6e-10
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = +2
Query: 263 VPDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPET 442
+P + +++ YL R F R + S + AGVPQGS L P+L++LY DIP + +
Sbjct: 142 LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQL 201
Query: 443 HLALFADDTAI 475
+ FADDTAI
Sbjct: 202 TIFTFADDTAI 212
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+ KL+E+ L R+ + + L +F F A+H + QV+R+T I R+
Sbjct: 59 LSKLFEKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCT-- 116
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
ALF D+A+AFD+VW +GL++K+
Sbjct: 117 ALFLDVAQAFDRVWLDGLMFKI 138
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 61.3 bits (142), Expect = 1e-09
Identities = 35/115 (30%), Positives = 51/115 (44%)
Frame = +2
Query: 251 VYMGVPDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPR 430
+ + +P+ +++ YL +R F R S + AGVPQGS L P L+ +Y DIP
Sbjct: 599 IKISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPT 658
Query: 431 SPETHLALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPTKSTSV 595
+ ++ FADDTAI + L WRI +N K V
Sbjct: 659 NSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHV 713
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
I KL+E+ L RL + I+ +FGFR H + QV+R+T I R+
Sbjct: 520 ISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCT-- 577
Query: 186 ALFFDIAKAFDKVWHNGLIYKL 251
A+F D+++AFDKVW +GL++K+
Sbjct: 578 AVFLDVSQAFDKVWLDGLMFKI 599
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 58.8 bits (136), Expect = 5e-09
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = +2
Query: 260 GVPDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDI----P 427
G+ RL +I+ +++NRSFR R+ S + G+PQGS LS +LF + I DI
Sbjct: 605 GIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIEDINDIVT 664
Query: 428 RSPETHLALFADDTAIYYSCKKKALLHDDF 517
R + +++L+ADD I+ K + + F
Sbjct: 665 RHKDIYISLYADDAIIFTKIKNINTVREKF 694
Score = 36.7 bits (81), Expect = 0.025
Identities = 19/85 (22%), Positives = 43/85 (50%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
+GK E+++ +RL F+ + ++ + F++ HS + + R+ L+ + +
Sbjct: 522 LGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTKNHV--S 579
Query: 186 ALFFDIAKAFDKVWHNGLIYKLYTW 260
L D +AFD+V + ++ +L W
Sbjct: 580 ILATDFERAFDRVGIHAVLCRLERW 604
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 53.2 bits (122), Expect = 3e-07
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +2
Query: 233 RFDIQTVYMGVPDRLVLIIRDYLSNRSFRCRVEGTRSRPRH-VTAGVPQGSALSPLLFSL 409
R D T P LV IR Y SNR C E + RH VT GVPQGS L PLL++
Sbjct: 7 RNDFNTANFSDPAYLVRFIRSYSSNRVLPC--ESSEGVFRHQVTGGVPQGSVLGPLLWNT 64
Query: 410 YINDIPRSP---ETHLALFADDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDINPT 580
+ I R P + + FADD A+ K + + + +++ P
Sbjct: 65 MYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRAIEHWLSSMGLELAPE 124
Query: 581 KSTSVLL 601
K+ +VL+
Sbjct: 125 KTKAVLI 131
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 46.4 bits (105), Expect = 3e-05
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +2
Query: 257 MGVPDRLVLIIRDYLSNRSFRCRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDI--- 424
+GVPD + +I +Y +R E G RS V+AGVPQGS L P+L+++ + I
Sbjct: 577 LGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH--QVSAGVPQGSVLGPILWNIMYDGILSI 634
Query: 425 --PRSPETHLALFADDTAIYYSCKKKALLHD 511
PR E H FADD AI K L D
Sbjct: 635 SKPRGVELH--CFADDVAITAVAKTIPELQD 663
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 41.9 bits (94), Expect = 7e-04
Identities = 22/86 (25%), Positives = 46/86 (53%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
I K+ ++++ KRLW V N ++ D++FGF+ S ++++ + + T
Sbjct: 517 IAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKS-TSDCLLYVDYLI----TKSKMHTS 571
Query: 186 ALFFDIAKAFDKVWHNGLIYKLYTWE 263
+ D ++AFD+V + +I +L W+
Sbjct: 572 LVTLDFSRAFDRVGVHSIIQQLQEWK 597
Score = 39.1 bits (87), Expect = 0.005
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +2
Query: 272 RLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLA 451
+++ I++++SNR RV S P + G+PQGS +S +LF + N + H
Sbjct: 601 KIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPISVILFLIAFNKLSNIISLHKE 660
Query: 452 L----FADD 466
+ +ADD
Sbjct: 661 IKFNAYADD 669
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 33.1 bits (72), Expect = 0.31
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Frame = +2
Query: 356 VTAGVPQGSALSPLLFSLYINDIPR--SPETHLALFADDTAIYYSCKKKALLHDDFRPQL 529
VT G PQGS P ++ + ++ + + P L+ +ADD + +A+L + +
Sbjct: 628 VTRGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQLM 687
Query: 530 PPWDSISRKWRIDINPTKSTS---VLLQKGS 613
SI W ++ STS ++L KG+
Sbjct: 688 ----SIVETWGAEVGDCLSTSKTVIMLLKGA 714
>AY060990-1|AAL28538.1| 461|Drosophila melanogaster HL01082p
protein.
Length = 461
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 216 DKVWHNGLIYKLYTWECQTDSCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAP 383
D W + + L+ W+ TDS SY + S+ + ER+ T PE +AP
Sbjct: 21 DCSWKESMDFDLFPWDAGTDSGISY----MSPNSETQPPERMYRITTMYPEDPRAP 72
>AF135119-1|AAD31715.1| 763|Drosophila melanogaster fat-spondin
protein.
Length = 763
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 216 DKVWHNGLIYKLYTWECQTDSCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAP 383
D W + + L+ W+ TDS SY + S+ + ER+ T PE +AP
Sbjct: 323 DCSWKESMDFDLFPWDAGTDSGISY----MSPNSETQPPERMYRITTMYPEDPRAP 374
>AE013599-2411|AAM68494.2| 628|Drosophila melanogaster CG6953-PB,
isoform B protein.
Length = 628
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 216 DKVWHNGLIYKLYTWECQTDSCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAP 383
D W + + L+ W+ TDS SY + S+ + ER+ T PE +AP
Sbjct: 188 DCSWKESMDFDLFPWDAGTDSGISY----MSPNSETQPPERMYRITTMYPEDPRAP 239
>AE013599-2409|AAF57910.1| 763|Drosophila melanogaster CG6953-PA,
isoform A protein.
Length = 763
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 216 DKVWHNGLIYKLYTWECQTDSCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAP 383
D W + + L+ W+ TDS SY + S+ + ER+ T PE +AP
Sbjct: 323 DCSWKESMDFDLFPWDAGTDSGISY----MSPNSETQPPERMYRITTMYPEDPRAP 374
>AY122108-1|AAM52620.1| 593|Drosophila melanogaster GH12004p
protein.
Length = 593
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 282 SSYETTCRTVRSDVESRERVPGPVTSQPESRKAPPSPR---YYLVCISMIY 425
+S+ T+ T S S + P+TS P A PSP VCI +++
Sbjct: 56 TSFSTSTSTTSSTSTSVAALAAPLTSGPGDSSATPSPSLSFILFVCIDLLF 106
>AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-PA
protein.
Length = 1424
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 282 SSYETTCRTVRSDVESRERVPGPVTSQPESRKAPPSPR---YYLVCISMIY 425
+S+ T+ T S S + P+TS P A PSP VCI +++
Sbjct: 887 TSFSTSTSTTSSTSTSVAALAAPLTSGPGDSSATPSPSLSFILFVCIDLLF 937
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 28.3 bits (60), Expect = 8.8
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 11/97 (11%)
Frame = +2
Query: 221 SLAQRFDIQTVYMGVPDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLL 400
S A +D Y G P V +++ +G S GV QG LSP+L
Sbjct: 491 SHASIYDTLRAY-GAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGDPLSPIL 549
Query: 401 FSLYINDIPRS-PE----------THLALFADDTAIY 478
F+L ++ + R+ P T+ A FADD ++
Sbjct: 550 FNLVMDRLLRTLPSEIGAKVGNAITNAAAFADDLVLF 586
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,075,889
Number of Sequences: 53049
Number of extensions: 751610
Number of successful extensions: 2537
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2503
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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