Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0160
(619 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 71 7e-13
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 55 4e-08
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 52 3e-07
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 45 4e-05
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 38 0.008
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 38 0.008
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 37 0.010
U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclas... 33 0.16
U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 29 2.7
U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical pr... 28 4.6
U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF101319-4|AAC69352.1| 463|Caenorhabditis elegans Hypothetical ... 28 4.6
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 27 8.1
AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical ... 27 8.1
AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical ... 27 8.1
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 27 8.1
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 27 8.1
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 8.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 8.1
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 70.9 bits (166), Expect = 7e-13
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +2
Query: 275 LVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLAL 454
L++ + ++LSNRSFR R+ T S + T GVPQG+ LSPLLF +Y+NDI +A
Sbjct: 46 LLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVAC 105
Query: 455 --FADDTAIYYSCKK 493
FADDT +Y S K
Sbjct: 106 KQFADDTKLYASTPK 120
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +2
Query: 260 GVPDRLVLIIRDYLSNRSFRCRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPE 439
G+ ++ L + +YL R R + S+ + GVPQGS +SP LF+ Y+ D+P +
Sbjct: 497 GIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQD 556
Query: 440 THLALFADDTAIYYSCKK 493
T L +ADD +I KK
Sbjct: 557 TMLISYADDMSIIARDKK 574
Score = 35.5 bits (78), Expect = 0.031
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 6 IGKLYERLLRKRLWDFVFANKILIDEKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 185
I KL E+ + KR+ + + + + GF+ HS V ++T I+ GLN + P P
Sbjct: 414 IAKLLEKAILKRIKNSIESPA----HQHGFKPEHSTTTAVIQVTNDIIGGLNMKNP-PER 468
Query: 186 ALF--FDIAKAFDKV 224
A+ D+ AFDKV
Sbjct: 469 AIMACLDLRAAFDKV 483
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Frame = +2
Query: 290 RDYLSNRSFRCRVEGTRSRPRH-VTAGVPQGSALSPLLFSLYIND--IPRSPETHLALFA 460
+++L NR+F ++ S+ + +++GVPQGS PLLF L+IN+ I +P +++ FA
Sbjct: 854 KEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINNLLIDLAPTINISCFA 913
Query: 461 DDTAIYYS 484
DD I+++
Sbjct: 914 DDVKIFHT 921
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 293 DYLSNRSFRCRVEGTRSRPRH-VTAGVPQGSALSPLLFSLYINDIPRS--PETHLALFAD 463
D+LS+R+F +V H +++GVP+GS P LF ++IN + S P + FAD
Sbjct: 31 DFLSSRTFSVKVNNHIDPNIHPISSGVPKGSVSGPFLFLIFINSLLLSVPPSISCSAFAD 90
Query: 464 DTAIY 478
D +Y
Sbjct: 91 DLKVY 95
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +3
Query: 81 EKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGL 239
E+ GFR S + +H L LL + R IP +F D KAFD V H +
Sbjct: 655 EQAGFRRSFSTIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDSVEHQAI 705
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +3
Query: 81 EKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGL 239
E+ GFR S + +H L LL + R IP +F D KAFD V H +
Sbjct: 394 EQAGFRRSFSTIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDSVEHQAI 444
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +3
Query: 81 EKFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGL 239
E+ GFR S + +H L LL + R IP +F D KAFD V H +
Sbjct: 484 EQAGFRRSFSTIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDTVEHQAI 534
>U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclase
protein 12 protein.
Length = 1280
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = -1
Query: 382 GALRDSGCDVTGPGTRSLDSTSERTVRQVVSYDEHESVWHSHVYSLYIKPLCQTLSNAFA 203
G L+ + C +T T + R +R+ + YD ++W + L+ P T++ + A
Sbjct: 790 GNLKSTNCLITSRWTLQIADFGLRELREGIMYDSSYNIWENF---LWTAPEAMTINGSLA 846
Query: 202 ISKKRAP 182
IS P
Sbjct: 847 ISNPPTP 853
>U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical
protein C50F7.6 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 273 DSCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAPPSPRYYLVCISMIYPGLRR 440
D+ S+Y T + RS + + V P TS + ++ PSPR + M P ++R
Sbjct: 54 DTSSAYNTGGESCRSVSVTPDGVFIPTTSNSQMIQSQPSPRVLRRTVKMASPAVQR 109
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 423 ISLIYKLNNNGERAEPCGTPAVT*RGRER 337
ISL + GER +PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical
protein T13C2.3a protein.
Length = 431
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 270 TDSCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAPPSP 392
T + +S TT T ++ + P T+ PE K PP P
Sbjct: 320 TSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLP 360
>U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical
protein T13C2.3b protein.
Length = 506
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 270 TDSCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAPPSP 392
T + +S TT T ++ + P T+ PE K PP P
Sbjct: 395 TSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLP 435
>AF101319-4|AAC69352.1| 463|Caenorhabditis elegans Hypothetical
protein K08D9.2 protein.
Length = 463
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 461 DDTAIYYSCKKKALLHDDFRPQLPPWDSISRKWRIDI 571
D T +YY CK++ + + F Q P ++ R+ +
Sbjct: 117 DVTCLYYDCKRREIANSSFPTQTAPMSVVTCPRRVGV 153
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 GLIYKLYTWECQTD-SCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAP-PSPRYYLV 407
G + L +E D + E + T+ +V RE +P P S +K+P P P+ L+
Sbjct: 510 GSLASLEDFEIPKDFQVEASEPSTPTLTPEVTIRETIPKPTPSPTSPQKSPVPQPQGLLI 569
Query: 408 CISMIY 425
+ Y
Sbjct: 570 PAKVTY 575
>AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical
protein F18A12.8b protein.
Length = 816
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 416 NDIPRSPETHLALFADDTAIYYSCKKKALL---HDDFRPQLPPWDSISRKWRIDINP 577
ND+P+ + +L L D+ YY KK+++ +F+ P+D K DI+P
Sbjct: 585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQKLTKPFD----KHEFDISP 637
>AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical
protein F18A12.8a protein.
Length = 848
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 416 NDIPRSPETHLALFADDTAIYYSCKKKALL---HDDFRPQLPPWDSISRKWRIDINP 577
ND+P+ + +L L D+ YY KK+++ +F+ P+D K DI+P
Sbjct: 585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQKLTKPFD----KHEFDISP 637
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 GLIYKLYTWECQTD-SCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAP-PSPRYYLV 407
G + L +E D + E + T+ +V RE +P P S +K+P P P+ L+
Sbjct: 474 GSLASLEDFEIPKDFQVEASEPSTPTLTPEVTIRETIPKPTPSPTSPQKSPVPQPQGLLI 533
Query: 408 CISMIY 425
+ Y
Sbjct: 534 PAKVTY 539
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 GLIYKLYTWECQTD-SCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAP-PSPRYYLV 407
G + L +E D + E + T+ +V RE +P P S +K+P P P+ L+
Sbjct: 477 GSLASLEDFEIPKDFQVEASEPSTPTLTPEVTIRETIPKPTPSPTSPQKSPVPQPQGLLI 536
Query: 408 CISMIY 425
+ Y
Sbjct: 537 PAKVTY 542
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 GLIYKLYTWECQTD-SCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAP-PSPRYYLV 407
G + L +E D + E + T+ +V RE +P P S +K+P P P+ L+
Sbjct: 6522 GSLASLEDFEIPKDFQVEASEPSTPTLTPEVTIRETIPKPTPSPTSPQKSPVPQPQGLLI 6581
Query: 408 CISMIY 425
+ Y
Sbjct: 6582 PAKVTY 6587
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 GLIYKLYTWECQTD-SCSSYETTCRTVRSDVESRERVPGPVTSQPESRKAP-PSPRYYLV 407
G + L +E D + E + T+ +V RE +P P S +K+P P P+ L+
Sbjct: 7162 GSLASLEDFEIPKDFQVEASEPSTPTLTPEVTIRETIPKPTPSPTSPQKSPVPQPQGLLI 7221
Query: 408 CISMIY 425
+ Y
Sbjct: 7222 PAKVTY 7227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,966,632
Number of Sequences: 27780
Number of extensions: 368279
Number of successful extensions: 1204
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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