Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0157
         (618 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118309-1|AAM48338.1|  779|Drosophila melanogaster GH14362p pro...    52   8e-07
AE014298-1620|AAN09633.2|  779|Drosophila melanogaster CG11727-P...    52   8e-07
AE014298-1619|AAF48044.3|  807|Drosophila melanogaster CG11727-P...    52   8e-07
AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA ...    28   8.8  

>AY118309-1|AAM48338.1|  779|Drosophila melanogaster GH14362p
           protein.
          Length = 779

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
 Frame = +1

Query: 196 PDK*NYPDARPGASRQAGGRNRRIEADAKNA-SLTTVHSRKXXXXXXXXXXXXXXXXHEV 372
           P + N P +      +    N+ IE+DAK+  SL + HSRK                 ++
Sbjct: 26  PGEENLPTSEMDLLAKLEAANKLIESDAKSLNSLHSTHSRKNSDTS------------QI 73

Query: 373 ETRPTPGTNGEEDLWSLWGRLVSNWESEWKRLNQWVRDLVRQGVP 507
               +  +  EED+W+ W  ++++WE   KR N  V +LVR+G+P
Sbjct: 74  SLTSSGNSVAEEDIWTTWATILNDWEGALKRKNPCVSELVRRGIP 118



 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = +3

Query: 498 GCPTHFIGIVWQLLAGVDTSPEKKLYSSYIKAKSACEKVI 617
           G P HF  IVWQ L+G     +KK Y+ YIKA SACEKVI
Sbjct: 116 GIPHHFRAIVWQQLSGASDG-DKKQYAEYIKATSACEKVI 154


>AE014298-1620|AAN09633.2|  779|Drosophila melanogaster CG11727-PB,
           isoform B protein.
          Length = 779

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
 Frame = +1

Query: 196 PDK*NYPDARPGASRQAGGRNRRIEADAKNA-SLTTVHSRKXXXXXXXXXXXXXXXXHEV 372
           P + N P +      +    N+ IE+DAK+  SL + HSRK                 ++
Sbjct: 26  PGEENLPTSEMDLLAKLEAANKLIESDAKSLNSLHSTHSRKNSDTS------------QI 73

Query: 373 ETRPTPGTNGEEDLWSLWGRLVSNWESEWKRLNQWVRDLVRQGVP 507
               +  +  EED+W+ W  ++++WE   KR N  V +LVR+G+P
Sbjct: 74  SLTSSGNSVAEEDIWTTWATILNDWEGALKRKNPCVSELVRRGIP 118



 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = +3

Query: 498 GCPTHFIGIVWQLLAGVDTSPEKKLYSSYIKAKSACEKVI 617
           G P HF  IVWQ L+G     +KK Y+ YIKA SACEKVI
Sbjct: 116 GIPHHFRAIVWQQLSGASDG-DKKQYAEYIKATSACEKVI 154


>AE014298-1619|AAF48044.3|  807|Drosophila melanogaster CG11727-PA,
           isoform A protein.
          Length = 807

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
 Frame = +1

Query: 196 PDK*NYPDARPGASRQAGGRNRRIEADAKNA-SLTTVHSRKXXXXXXXXXXXXXXXXHEV 372
           P + N P +      +    N+ IE+DAK+  SL + HSRK                 ++
Sbjct: 26  PGEENLPTSEMDLLAKLEAANKLIESDAKSLNSLHSTHSRKNSDTS------------QI 73

Query: 373 ETRPTPGTNGEEDLWSLWGRLVSNWESEWKRLNQWVRDLVRQGVP 507
               +  +  EED+W+ W  ++++WE   KR N  V +LVR+G+P
Sbjct: 74  SLTSSGNSVAEEDIWTTWATILNDWEGALKRKNPCVSELVRRGIP 118



 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = +3

Query: 498 GCPTHFIGIVWQLLAGVDTSPEKKLYSSYIKAKSACEKVI 617
           G P HF  IVWQ L+G     +KK Y+ YIKA SACEKVI
Sbjct: 116 GIPHHFRAIVWQQLSGASDG-DKKQYAEYIKATSACEKVI 154


>AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA
            protein.
          Length = 3166

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 152  TEKSPELNPNADCRIPTSETIPTPDRALLAKLEE 253
            +EK P++  NA+     SETI +PD    +K  E
Sbjct: 1281 SEKKPQIPANAEPNTKPSETIESPDGGFPSKTTE 1314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,728,571
Number of Sequences: 53049
Number of extensions: 602210
Number of successful extensions: 1460
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)