Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0155
         (639 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000038D800 Cluster: COG2319: FOG: WD40 repeat; n=3; ...    33   5.8  
UniRef50_A0Y776 Cluster: Putative lysophospholipase L; n=2; Alte...    33   5.8  

>UniRef50_UPI000038D800 Cluster: COG2319: FOG: WD40 repeat; n=3;
           Nostoc punctiforme PCC 73102|Rep: COG2319: FOG: WD40
           repeat - Nostoc punctiforme PCC 73102
          Length = 2172

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 13/32 (40%), Positives = 24/32 (75%)
 Frame = +1

Query: 124 PLVKFRRLPSDQNSLRILYNITCFNFTTRFLH 219
           P +KF  +P+D++SLR+++++T  N +T F H
Sbjct: 698 PKLKFPEIPTDESSLRLIFSVTKVN-STNFSH 728


>UniRef50_A0Y776 Cluster: Putative lysophospholipase L; n=2;
           Alteromonadales|Rep: Putative lysophospholipase L -
           Alteromonadales bacterium TW-7
          Length = 315

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +2

Query: 365 IALSITT*QHDSYTDSDDDYRLTNKFRHCNLLSKKNKTHAVCSRCDVTRPRVIR 526
           I L I + ++D   D++  YRL NK+ +  L S  +  H +   CD  R  V++
Sbjct: 251 IPLYIASAKNDVVVDNEAHYRLANKYANITLESFTDAKHELFFECDDVRQPVLK 304


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,081,519
Number of Sequences: 1657284
Number of extensions: 8893518
Number of successful extensions: 19844
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19841
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)