Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0155
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1761|AAF58340.2| 1093|Drosophila melanogaster CG6280-PA...    29   7.0  

>AE013599-1761|AAF58340.2| 1093|Drosophila melanogaster CG6280-PA
            protein.
          Length = 1093

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 333  PNPRVYPKHPVSHYPLQLNNTIHTRIVTMTIVSQINSDTVI-YCPRKIKHTLYVAAVTSP 509
            PN      H V+H P ++    +TR++   ++ Q+ + T I   P+ +K +  VAA+  P
Sbjct: 894  PNSLTPWTHSVAHIPPKVLQNYYTRML-KKLLPQLTAKTPIPQSPKAVKLSKPVAAIKQP 952

Query: 510  ARAL*G 527
             + + G
Sbjct: 953  VKPVRG 958


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,706,871
Number of Sequences: 53049
Number of extensions: 433918
Number of successful extensions: 955
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)