Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0155
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81473-2|CAB03898.1|  240|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81473-1|CAB03897.1|  302|Caenorhabditis elegans Hypothetical pr...    29   2.8  

>Z81473-2|CAB03898.1|  240|Caenorhabditis elegans Hypothetical
           protein C17D12.1b protein.
          Length = 240

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +2

Query: 404 TDSDDDYRLTNKFRHCNLLSKKNKTHAVCSRCDVTRPRVIRHSR 535
           +D +D+      FRH +L         +C+RCD  RP    H R
Sbjct: 25  SDEEDESDEEAVFRHDHLNRSSATEWTMCTRCDSLRPPRAHHCR 68


>Z81473-1|CAB03897.1|  302|Caenorhabditis elegans Hypothetical
           protein C17D12.1a protein.
          Length = 302

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +2

Query: 404 TDSDDDYRLTNKFRHCNLLSKKNKTHAVCSRCDVTRPRVIRHSR 535
           +D +D+      FRH +L         +C+RCD  RP    H R
Sbjct: 87  SDEEDESDEEAVFRHDHLNRSSATEWTMCTRCDSLRPPRAHHCR 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,320,534
Number of Sequences: 27780
Number of extensions: 227603
Number of successful extensions: 486
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)