Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0152
(599 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 54 1e-07
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 53 2e-07
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 53 2e-07
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 44 7e-05
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 40 0.002
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 39 0.003
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 33 0.13
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 33 0.18
SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05) 33 0.18
SB_39564| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 29 2.2
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 29 2.2
SB_13743| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_12272| Best HMM Match : ComC (HMM E-Value=1.7) 28 6.6
SB_19881| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
GYY P DC+ +Y C F A L C+ GL +S TCDWPRNV CD
Sbjct: 789 GYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDCD 836
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCDGASAGGG 419
G+Y P DC+ +Y C F A L C GL +S + TCDWPR V CD G
Sbjct: 999 GHYADPMDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWPRYVDCDRTPTTSG 1053
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
G+Y P DC+ +Y C F A L C GL +S + CDWPR V CD
Sbjct: 894 GHYADPRDCSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDCD 941
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
G+Y P DC+ +Y C F A L C GL +S + CDWPR V CD
Sbjct: 1244 GHYADPRDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDCD 1291
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
G+Y P DC+ +Y C F L C GL +S + CDWPR V CD
Sbjct: 1144 GHYADPRDCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYVDCD 1191
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 240 RLSRGFGYYPHPTDCTLYYVCVFGGA--LLESCTGGLMYSHELQTCDWPRNVGC 395
RL + GYY P DC +Y C +G A LL C GL++S +TCD+P V C
Sbjct: 568 RLGKPRGYYADPKDCAQFYFC-YGSAESLLSRCPRGLLWSVVKKTCDYPHLVDC 620
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 261 YYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
YY P +C+ Y C +F A L+SC GL ++ E CD P NV C+
Sbjct: 1461 YYHDPRNCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNCN 1507
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 249 RGFGYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
R G+Y P DC+ +Y C L C GL +S + CD P V CD
Sbjct: 1346 RPHGHYADPRDCSRFYQCDASHKTFLHRCPDGLKWSVKKTACDLPLYVDCD 1396
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 264 YPHPTDCTLYYVCV-FGGALLESCTGGLMYSHELQTCDWPRNVGCDGASAGG 416
+ P DC YY C + SC G +++H + CD V CD + G
Sbjct: 75 FADPRDCFKYYHCDGYDDVRWRSCPTGQLWNHVNKKCDRADLVICDRDATPG 126
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 243 LSRGFGYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
LS G+Y P +C+ +Y C F A L SC GL +S TCDWPR V CD
Sbjct: 23 LSLPNGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDCD 75
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +3
Query: 246 SRGFGYYPHPTDCTLYYVCVFGGALLESCTGGLMYSHELQTCDWPRNVGCDG 401
+R G YPHP C +Y C G A C GL ++ E + CDWP N C+G
Sbjct: 88 NRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPCEG 139
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
G+Y P +C+ +Y C F A L SC GL +S TCDWPR V CD
Sbjct: 121 GHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDCD 168
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 249 RGFGYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
R G Y DC+ YY C F +C+ L +S CD +V CD
Sbjct: 25 RDAGCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWSAVKNICDHAADVDCD 75
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/54 (40%), Positives = 27/54 (50%)
Frame = +3
Query: 252 GFGYYPHPTDCTLYYVCVFGGALLESCTGGLMYSHELQTCDWPRNVGCDGASAG 413
G G Y P +C Y VC G +C GL ++ + CD PRNV C GA G
Sbjct: 675 GNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLPRNVKCAGAGGG 728
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVCVFGGALLES-CTGGLMYSHELQTCDWPRNV-GCDGASAGG 416
G Y ++C LY C G + C GL ++ + CD+P NV GC G+S G
Sbjct: 322 GNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNVPGCSGSSGSG 376
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVCVFGGALLESCTGGLMYSHELQTCDWPRNVGC 395
G Y P++C + C G A C L + + C+WP V C
Sbjct: 603 GDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNC 648
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/46 (26%), Positives = 16/46 (34%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVCVFGGALLESCTGGLMYSHELQTCDWPRNVGC 395
G Y +C + +C G C L Y C+W V C
Sbjct: 524 GKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTVDC 569
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVCVFGGALLESCTGGLMYSHELQTCDWPRNVGCDGASAGGGEELERF 437
G Y P DC+ YY C G + + C GL ++ +++CD P V C EE E+
Sbjct: 234 GTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKVNCVTKQRDEEEEEEKV 293
Query: 438 SERDD 452
+ +D
Sbjct: 294 KDDED 298
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 258 GYYPHPTD-CTLYYVCVFGGALLESCTGGLMYSHELQTCDWPRNVGC 395
G Y P D C + C A + C GGL+Y+ + + CDWPRNV C
Sbjct: 82 GEYRDPYDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 249 RGFGYYPHPTDCTLYYVCVFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
R G Y HP +C +Y C C GL ++ + CDWP+N C+
Sbjct: 65 RANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPCE 114
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 261 YYPHPTDCTLYYVCVFGGALLESCTGGLMYSHELQTCDWPRNVGCDGASA 410
Y P T C YY C +G A+ + C G ++ + C+W C G A
Sbjct: 30 YLPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKCVGTPA 79
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 252 GFGYYPHPTDCTLYYVCVFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
G G Y +C + +C G A ++C GL+++ +L CDW V C+
Sbjct: 462 GDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVKCN 510
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 264 YPHPTDCTLYYVCV-FGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
+ P DC+ YY C + L SC G +++H + CD V CD
Sbjct: 1499 FADPKDCSKYYHCDGYDDGRLRSCPTGQLWNHVNKKCDRADLVICD 1544
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVCVFGGALLESCTGGLMYSHELQTCD 374
G Y HP+ C +Y C G A C GL ++ + CD
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
>SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05)
Length = 85
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 258 GYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGC 395
G+Y P DC +Y C F C+ +S TCD +NV C
Sbjct: 35 GHYTDPADCAKFYQCDGFHRTFHRMCSDVPKWSVMKSTCDHAKNVDC 81
>SB_39564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 149 SVNTANVKSASAL*DLIVKAHRSRSLGNSTQHLHSSSH 36
+++T + S +L AH +RSL TQH HS +H
Sbjct: 26 NMHTQHAHSTRSLNTHTQHAHSTRSLNTHTQHAHSDTH 63
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 149 SVNTANVKSASAL*DLIVKAHRSRSLGNSTQHLHSSSH 36
+++T + S +L AH +RSL TQH HS +H
Sbjct: 213 NMHTQHAHSTRSLNTHTQHAHSTRSLNTHTQHAHSDTH 250
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 249 RGFGYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
R G Y DC+ YY C F +C+ L +S CD +V CD
Sbjct: 7 RDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDCD 57
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 249 RGFGYYPHPTDCTLYYVC-VFGGALLESCTGGLMYSHELQTCDWPRNVGCD 398
R G Y DC+ YY C F +C+ L +S CD +V CD
Sbjct: 74 RDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDCD 124
>SB_13743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = -3
Query: 417 HHQRWHHHSLRCAANRTFGARGCT*VHQCMIQVGRRQTRKHSTMCSRWDEDSSRILWTVE 238
H Q + H+ C R T H +Q R QTR T ++W++ ++ T +
Sbjct: 181 HMQTRYKHA--CRRTCRHARRHATDTHADTLQ-RRMQTRMQKTRSTQWEDPRLQLNTTSQ 237
Query: 237 VHISFNI 217
VH F++
Sbjct: 238 VHTRFSL 244
>SB_12272| Best HMM Match : ComC (HMM E-Value=1.7)
Length = 267
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 212 RQMLNEMWTSTVQRIRLLSSSH 277
R ++NE W ST+ R R S SH
Sbjct: 127 RHIMNEAWNSTLSRFRHRSPSH 148
>SB_19881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -1
Query: 170 RSEAARHSVNTANVKSASAL*DLIVKAHRSRSLGNSTQHLHSSSHHRRIVHEKTR 6
R+ A NT + +S L + VK H SR L N+T HSS + V E +R
Sbjct: 46 RNTRASGLYNTTVKEHSSGLYNTTVKEH-SRGLYNTTVKEHSSGLYNTTVKEHSR 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,870,519
Number of Sequences: 59808
Number of extensions: 391586
Number of successful extensions: 1108
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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