Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0151
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   0.96 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   0.96 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.9  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 638 IPLKHAYFNVFSYNSGRVT 582
           +P KH Y N+  + SG VT
Sbjct: 135 VPYKHLYVNILIHLSGLVT 153


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 638 IPLKHAYFNVFSYNSGRVT 582
           +P KH Y N+  + SG VT
Sbjct: 135 VPYKHLYVNILIHLSGLVT 153


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 174 TRRTEVIMSISVTKAPPLPSI 236
           T  T+   ++S T+APP P++
Sbjct: 442 TSTTQRTTTVSTTEAPPAPAV 462


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +3

Query: 132  LHWPFDCRVGHRCPTRRTEVIMSISVTKAPPLPSIVC*CMFSLIGILE 275
            L WPFD +V       + E+ + I+  +  P+   V    F+L+ +++
Sbjct: 1252 LDWPFDPKVNFTYFEDKNEIGVYITYLQLEPI-GFVFLIFFALLMVIQ 1298


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +3

Query: 132  LHWPFDCRVGHRCPTRRTEVIMSISVTKAPPLPSIVC*CMFSLIGILE 275
            L WPFD +V       + E+ + I+  +  P+   V    F+L+ +++
Sbjct: 1252 LDWPFDPKVNFTYFEDKNEIGVYITYLQLEPI-GFVFLIFFALLMVIQ 1298


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 129 KLHWPFDCRVGHRC 170
           KL W F  R GH C
Sbjct: 58  KLWWEFCQRNGHNC 71


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 493 ELFILVSNYYCLA*CMAILDARILLSLNI 407
           E+ +LV + YCL       D     SLNI
Sbjct: 282 EIGLLVDSTYCLFLLFVFCDCSHQASLNI 310


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 493 ELFILVSNYYCLA*CMAILDARILLSLNI 407
           E+ +LV + YCL       D     SLNI
Sbjct: 282 EIGLLVDSTYCLFLLFVFCDCSHQASLNI 310


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 493 ELFILVSNYYCLA*CMAILDARILLSLNI 407
           E+ +LV + YCL       D     SLNI
Sbjct: 282 EIGLLVDSTYCLFLLFVFCDCSHQASLNI 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,298
Number of Sequences: 336
Number of extensions: 2764
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)