Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0149
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...    29   2.5  
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...    29   3.3  
U40941-5|AAA81710.1|  300|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
           protein B0222.9 protein.
          Length = 1217

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 182 FGGLSMNGSWIFCMCEVYPGGVCNPSF 102
           FGG   N SWI CMC +    +  P++
Sbjct: 708 FGGKVNNASWIACMCAIVAKKLNRPTY 734


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
           protein F15E6.6 protein.
          Length = 1228

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 182 FGGLSMNGSWIFCMCEVYPGGVCNPSFCV 96
           FGG   N SWI C+C V    +  P++ V
Sbjct: 740 FGGKLNNASWIACICSVVAKKLNRPTYGV 768


>U40941-5|AAA81710.1|  300|Caenorhabditis elegans Hypothetical
           protein F35C8.5 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 531 AARRLSWVRQGFPSHDVVKRRPVNC 457
           A  R+ W   G P+HD+   RP+ C
Sbjct: 229 ALHRIFWFYSGAPAHDMHHLRPLTC 253


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,370,034
Number of Sequences: 27780
Number of extensions: 319214
Number of successful extensions: 785
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)