Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0148
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       26   0.31 
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   2.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.7  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   8.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.8  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 17/75 (22%), Positives = 30/75 (40%)
 Frame = -1

Query: 296 GNENEQRYTASKEPGSIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQR 117
           G++ E R     +PG   T EQ  + +       PTQ  +++   E S     + + VQ 
Sbjct: 393 GSQEESRVLDLSKPGCSYTGEQKSRRKGPAFKVDPTQVESEEEDEETSTTVFSNVEVVQE 452

Query: 116 NESRHSDLTNTSTIK 72
              +    +N +  K
Sbjct: 453 EAKKEESDSNNNNNK 467


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 202 PSRFLRAFSICSSVCIDPGSLLAVY 276
           P RF+R F+IC    +D  SL + Y
Sbjct: 93  PDRFVRQFTICFD-DVDLNSLYSSY 116


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 577 YGQRFAESQKNQI 539
           YG+R + S++NQI
Sbjct: 450 YGRRLSNSERNQI 462


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -1

Query: 230 IEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQR 117
           +EK +   EG +  ++I     +E +   EKH++ V++
Sbjct: 47  LEKGKCTPEGEELKKDIPDALQNECAKCNEKHKEGVRK 84


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 622 LDRRPTNFILRNHAGYGQRFAESQKNQII 536
           LD   +NF   NH  Y + +  + +N ++
Sbjct: 88  LDYGNSNFPPINHQNYNEPYQRTHENMLL 116


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 622 LDRRPTNFILRNHAGYGQRFAESQKNQII 536
           LD   +NF   NH  Y + +  + +N ++
Sbjct: 88  LDYGNSNFPPINHQNYNEPYQRTHENMLL 116


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 622 LDRRPTNFILRNHAGYGQRFAESQKNQII 536
           LD   +NF   NH  Y + +  + +N ++
Sbjct: 88  LDYGNSNFPPINHQNYNEPYQRTHENMLL 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,803
Number of Sequences: 336
Number of extensions: 3167
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)