Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0148
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical pr... 33 0.18
AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein. 33 0.18
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.54
AL023853-2|CAA19559.3| 253|Caenorhabditis elegans Hypothetical ... 30 1.2
Z69662-4|CAA93504.1| 244|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical ... 30 1.6
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 29 2.2
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 29 2.2
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 29 2.2
AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear recep... 29 2.2
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 29 2.9
Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical p... 29 2.9
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 29 2.9
AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical ... 29 2.9
U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical ... 29 3.8
U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF016449-1|AAG23996.2| 122|Caenorhabditis elegans Hypothetical ... 28 6.6
Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF039038-5|AAK29711.1| 604|Caenorhabditis elegans Cell division... 27 8.7
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical
protein F32H2.3 protein.
Length = 824
Score = 33.1 bits (72), Expect = 0.18
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = -1
Query: 293 NENEQRYTASKEPGSIQTEEQ-IEKARKN-REGYQPTQNINKKSMSEKSIAEEKHEDFVQ 120
N+NE Y A G ++ EE+ + + KN + G + N+ +++ + EEK+ED
Sbjct: 25 NDNESFYNAD---GDVELEEEEVHETPKNFKNGGRFKTNMTNPKVNDLTTIEEKNEDLRS 81
Query: 119 RNESRHSDLTNTSTIKTNFENSFYNDENGEGFV 21
SR + + +F + F GE +
Sbjct: 82 AASSRSASRPASVMSDKSFSSQFEFQSGGENAI 114
>AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein.
Length = 824
Score = 33.1 bits (72), Expect = 0.18
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = -1
Query: 293 NENEQRYTASKEPGSIQTEEQ-IEKARKN-REGYQPTQNINKKSMSEKSIAEEKHEDFVQ 120
N+NE Y A G ++ EE+ + + KN + G + N+ +++ + EEK+ED
Sbjct: 25 NDNESFYNAD---GDVELEEEEVHETPKNFKNGGRFKTNMTNPKVNDLTTIEEKNEDLRS 81
Query: 119 RNESRHSDLTNTSTIKTNFENSFYNDENGEGFV 21
SR + + +F + F GE +
Sbjct: 82 AASSRSASRPASVMSDKSFSSQFEFQSGGENAI 114
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = -1
Query: 371 YT*ENSNACCPRK---HSTSFKRNH**KGNENEQRYTASKEPGSIQTEEQIEKARKN-RE 204
+T E + C +K H T + NH +NE+ + + +E++EK ++ ++
Sbjct: 253 FTAETDDFCSLQKENVHCTILRINHKEVAEKNEEDKKEEEPKKEEEKKEEVEKKEEDEKK 312
Query: 203 GYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRHSD 96
+P + KK +K E+K E+ + E + +
Sbjct: 313 DEEPKKEEEKKEEEQKEEVEKKEEEEKKDEEPKKEE 348
>AL023853-2|CAA19559.3| 253|Caenorhabditis elegans Hypothetical
protein Y71A12C.2 protein.
Length = 253
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 501 IISLR*SVRTSR-MIWFF*LSANLCPY-PAWLRNI 599
I SLR V R +WFF LSA + P+ P WL NI
Sbjct: 131 IESLRCLVNAERDRLWFFLLSARIFPFTPHWLLNI 165
>Z69662-4|CAA93504.1| 244|Caenorhabditis elegans Hypothetical
protein F56D5.5 protein.
Length = 244
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 281 QRYTASKEPGSIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRH 102
Q T S + + EE++++ + EG + QN+ +K E+ + + K E + RNE +
Sbjct: 134 QTETRSVKEALKEKEEEVKRLLVDMEG-KTFQNLTEKGRMEEEMNDAKREAQILRNEMK- 191
Query: 101 SDLTNTSTIKTN 66
L T K N
Sbjct: 192 -SLQKNMTAKEN 202
>AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical
protein F28H6.6 protein.
Length = 740
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -1
Query: 170 SMSEKSIAEEKHED-FVQRN--ESRHSDLTNTSTIKTNFENSFYNDE 39
SM E AE ++ +Q+ ES + TST+KT F N+ YND+
Sbjct: 274 SMIETWFAERSEQEAHLQKGMLESEKFYMQQTSTVKTVFMNALYNDD 320
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -1
Query: 248 IQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEK----HEDFVQRNESRHSDLTNTS 81
IQT+ +K N P+ + +SE+ + + + D V + E+ + T
Sbjct: 202 IQTDVDEQKPSSNNSAPLPSMELEMAKLSEQIVEMHRAVCSYVDPVTKRENFDMKM-ETE 260
Query: 80 TIKTNFENSFYNDE 39
T K F N+FYN E
Sbjct: 261 TTKIAFMNAFYNPE 274
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -1
Query: 248 IQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEK----HEDFVQRNESRHSDLTNTS 81
IQT+ +K N P+ + +SE+ + + + D V + E+ + T
Sbjct: 202 IQTDVDEQKPSSNNSAPLPSMELEMAKLSEQIVEMHRAVCSYVDPVTKRENFDMKM-ETE 260
Query: 80 TIKTNFENSFYNDE 39
T K F N+FYN E
Sbjct: 261 TTKIAFMNAFYNPE 274
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -1
Query: 248 IQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEK----HEDFVQRNESRHSDLTNTS 81
IQT+ +K N P+ + +SE+ + + + D V + E+ + T
Sbjct: 176 IQTDVDEQKPSSNNSAPLPSMELEMAKLSEQIVEMHRAVCSYVDPVTKRENFDMKM-ETE 234
Query: 80 TIKTNFENSFYNDE 39
T K F N+FYN E
Sbjct: 235 TTKIAFMNAFYNPE 248
>AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -1
Query: 248 IQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEK----HEDFVQRNESRHSDLTNTS 81
IQT+ +K N P+ + +SE+ + + + D V + E+ + T
Sbjct: 141 IQTDVDEQKPSSNNSAPLPSMELEMAKLSEQIVEMHRAVCSYVDPVTKRENFDMKM-ETE 199
Query: 80 TIKTNFENSFYNDE 39
T K F N+FYN E
Sbjct: 200 TTKIAFMNAFYNPE 213
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 384 VSGTSGAGLSSFFILTKSFFLNSGTVSTISLCCHNDM 494
VSG +G GL S +L S +ST ++C + D+
Sbjct: 270 VSGQAGVGLGSCIVLLASVVTTITALSTCAICTNGDV 306
>Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 384 VSGTSGAGLSSFFILTKSFFLNSGTVSTISLCCHNDM 494
VSG +G GL S +L S +ST ++C + D+
Sbjct: 270 VSGQAGVGLGSCIVLLASVVTTITALSTCAICTNGDV 306
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 384 VSGTSGAGLSSFFILTKSFFLNSGTVSTISLCCHNDM 494
VSG +G GL S +L S +ST ++C + D+
Sbjct: 270 VSGQAGVGLGSCIVLLASVVTTITALSTCAICTNGDV 306
>AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 384 VSGTSGAGLSSFFILTKSFFLNSGTVSTISLCCHNDM 494
VSG +G GL S +L S +ST ++C + D+
Sbjct: 270 VSGQAGVGLGSCIVLLASVVTTITALSTCAICTNGDV 306
>U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical
protein C02H7.1 protein.
Length = 535
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Frame = -1
Query: 335 KHSTSFKRNH**KGNENEQRYTASKEPGSIQTEEQIEKARKNREGYQPTQNINKKSMSEK 156
K +S K H K +++ KE + + +R + ++ +K+ EK
Sbjct: 143 KKRSSKKETHEEKEKSEKKKSAEEKEKKKKSSSSKERHKSSDRSSEKSSEKSSKEKKKEK 202
Query: 155 SIAEEKHEDFVQRNESRHSDLTNTSTIKTNFENSFYNDENG-EGF 24
S +EK + + RH ++ N+ENG EG+
Sbjct: 203 STTDEKPKKSKKDPSERHFKRQDSMIAVNGDAPDTPNNENGDEGY 247
>AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical
protein Y37B11A.2 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/53 (22%), Positives = 31/53 (58%)
Frame = -1
Query: 290 ENEQRYTASKEPGSIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHE 132
EN+++++ S+ T+E + A ++ + + T+ +++ S+ E S +E+ E
Sbjct: 289 ENQRQFSREMTACSVMTDETVVAAAEHSQPVEQTRLLSQTSIGEPSTSEKSVE 341
>U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical
protein F40H6.2 protein.
Length = 997
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 202 PSRFLRAFSICSSVCIDPGSLLAVYRCSFSFPFYQWFLLNDVECFLGQQAF 354
P R L F ++VC+ L V +C + P Y + N+ F+G Q+F
Sbjct: 509 PKRPLVTFVRDTNVCVFREDLETVEKCGATKPLYLYINKNNGGYFMGIQSF 559
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = -1
Query: 293 NENEQRYTASKEPGSIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRN 114
NE + +Y + ++ EE ++ R Y+ KK++ E E+ DF +N
Sbjct: 120 NEEDYKYKRERRLLLLRMEELVQDTASRRRAYR------KKALEEAIDNYEQKLDFAVKN 173
Query: 113 ESRHSDLTNTSTIKTNFENSFYND 42
ES+ + ++ T F Y D
Sbjct: 174 ESQWTFMSAMYFAGTLFTTIGYGD 197
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = -1
Query: 293 NENEQRYTASKEPGSIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRN 114
NE + +Y + ++ EE ++ R Y+ KK++ E E+ DF +N
Sbjct: 120 NEEDYKYKRERRLLLLRMEELVQDTASRRRAYR------KKALEEAIDNYEQKLDFAVKN 173
Query: 113 ESRHSDLTNTSTIKTNFENSFYND 42
ES+ + ++ T F Y D
Sbjct: 174 ESQWTFMSAMYFAGTLFTTIGYGD 197
>Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical
protein C05D12.3c protein.
Length = 1001
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 236 EQIEKARKNREGY--QPTQNINKKSMSEKSIAEEKHEDFVQRNE 111
EQ+E R N +G TQN NK SE IA FVQ+ +
Sbjct: 105 EQLETLRSNFKGMVNSITQNWNKNKESENWIANFMFYGFVQQGQ 148
>Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical
protein C05D12.3a protein.
Length = 1039
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 236 EQIEKARKNREGY--QPTQNINKKSMSEKSIAEEKHEDFVQRNE 111
EQ+E R N +G TQN NK SE IA FVQ+ +
Sbjct: 105 EQLETLRSNFKGMVNSITQNWNKNKESENWIANFMFYGFVQQGQ 148
>AF016449-1|AAG23996.2| 122|Caenorhabditis elegans Hypothetical
protein C50H11.8 protein.
Length = 122
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 130 SSCFSSAMDFSDILFLFIF 186
S FSS+M FS +LFLF F
Sbjct: 40 SRTFSSSMSFSSLLFLFAF 58
>Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical
protein K08E4.5 protein.
Length = 357
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 554 SKEPNHSGSSDGLPQRNNGRHV 489
S NHS S + P RN+ RHV
Sbjct: 310 SLHENHSESPESFPSRNSSRHV 331
>AF039038-5|AAK29711.1| 604|Caenorhabditis elegans Cell division
cycle related protein25.1 protein.
Length = 604
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/93 (23%), Positives = 40/93 (43%)
Frame = -1
Query: 287 NEQRYTASKEPGSIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNES 108
NE T +E GS + + ++ P ++++ + +A +FV
Sbjct: 30 NESPKTLFEEDGSSRDSGVSMTSCSDKSDASPEEDVDFSKLESGRVALTDCSNFV----- 84
Query: 107 RHSDLTNTSTIKTNFENSFYNDENGEGFVMKTV 9
S L S++ ++ +SFYN + G MKTV
Sbjct: 85 --SILQRNSSVSSSRSSSFYNYDTPTGRKMKTV 115
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 227 EKARKNREGYQPTQNINKKSMSEKS 153
E+ RK E YQPT NK ++SEKS
Sbjct: 48 ERLRKEIESYQPT---NKSNISEKS 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,678,982
Number of Sequences: 27780
Number of extensions: 306246
Number of successful extensions: 1271
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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