Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0147
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.39 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 369 TFSKLLPSYDGSSRTLVFYIDSENVDNALN 458
           TF++L  S +G    +  Y+  ENV+  LN
Sbjct: 740 TFTELSKSLEGLLENVAQYLQIENVEQTLN 769


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = -2

Query: 617 HFRVLVYRFFYTMLLLYLSRFLHLGFVTKRQQLYHLI 507
           HF +  Y F+Y  ++L    + +  F+     L  L+
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLL 131


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 307 FLSQLLYFINSVYK*RIKELGRMV 236
           F   LLY I  +   R KEL R++
Sbjct: 162 FYQLLLYLITDMILMRYKELNRVI 185


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 621 LPFSGSSLPIFLYNASFISIPVFAPG 544
           +PF G S  +   N + +  P+  PG
Sbjct: 417 VPFFGRSFTLQFTNETQVGAPIKGPG 442


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,805
Number of Sequences: 336
Number of extensions: 2182
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)