Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0145
         (660 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6Z0M5 Cluster: Putative uncharacterized protein OJ1212...    33   4.6  
UniRef50_Q6UKM0 Cluster: Forsythia cell detaching factor protein...    33   6.1  
UniRef50_A0DZZ0 Cluster: Chromosome undetermined scaffold_70, wh...    33   8.0  

>UniRef50_Q6Z0M5 Cluster: Putative uncharacterized protein
           OJ1212_C09.22; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ1212_C09.22 - Oryza sativa subsp. japonica (Rice)
          Length = 981

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 26/87 (29%), Positives = 37/87 (42%)
 Frame = +2

Query: 389 PTWR*RSFVAIKTRNVSLKYFQIFKSKKIVNQVDGHCQGGINTSRPAIKQAECRQHWRKR 568
           P +    F+A    N+ +K     +SK+  N++D    GG     P+  Q +     + R
Sbjct: 201 PPYNGEEFIA--DPNLKIKTRGKRRSKRFKNEMDSGL-GGSRRKPPSCVQLDAALV-QNR 256

Query: 569 LQKLDQGGHDPQ*CGNRPKKKKKNTVR 649
               DQ GH    C  RPKKKK    R
Sbjct: 257 CSLCDQEGHKKPKCPKRPKKKKSKKNR 283


>UniRef50_Q6UKM0 Cluster: Forsythia cell detaching factor protein;
           n=2; Tannerella forsythensis|Rep: Forsythia cell
           detaching factor protein - Bacteroides forsythus
           (Tannerella forsythensis)
          Length = 536

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -3

Query: 529 GGTAGIYASLTMSVHLVDNLLRLKDLKIF*RDISGFYGYK*SLTPRRSW 383
           GG +GIY + ++     D L  + DL +   D  GF GY  S TP   W
Sbjct: 25  GGKSGIYGACSIE----DFLPGISDLSLTHEDAEGFLGYPTSFTPANFW 69


>UniRef50_A0DZZ0 Cluster: Chromosome undetermined scaffold_70, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_70,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 732

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +2

Query: 422 KTRNVSLKYFQIFKSKKIVNQVDGHCQGGINTSRPAIKQAECRQHWRKRLQKLDQGGHDP 601
           K ++VS K  QI + K    Q       G NTS P I + E +    +R QK+ +  +  
Sbjct: 294 KPKDVSTKRTQITQQKNAQQQKSATSSKG-NTSTPKISEVEIKTSQSRRNQKIPEKANPT 352

Query: 602 Q*CGNRPKKKKK 637
           +   N+ K  KK
Sbjct: 353 EPKLNQEKSNKK 364


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,705,743
Number of Sequences: 1657284
Number of extensions: 14121237
Number of successful extensions: 30347
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30336
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)