Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0145
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54271-3|CAA91039.1|  713|Caenorhabditis elegans Hypothetical pr...    31   0.55 
Z70270-7|CAH04652.1|  175|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z50109-5|CAA90438.1|  325|Caenorhabditis elegans Hypothetical pr...    29   2.2  

>Z54271-3|CAA91039.1|  713|Caenorhabditis elegans Hypothetical
           protein F21D5.3 protein.
          Length = 713

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = -3

Query: 262 IKPDSSIAFAYDVNITKKLTGRY 194
           +KPDS+  +AYD+ I+KKLT  Y
Sbjct: 1   MKPDSNGVYAYDMKISKKLTMAY 23


>Z70270-7|CAH04652.1|  175|Caenorhabditis elegans Hypothetical
           protein C53D6.10 protein.
          Length = 175

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 516 PAVPPLSRPNADNIGGSGCKNWTKVVTTLSNAETDQKKKKKIRSA 650
           P   PL+ P  DN      K+ +KV + +  A  D KKKK  +S+
Sbjct: 51  PPPTPLANPTEDNKKAVSVKDSSKVDSKIVKATGDGKKKKNGKSS 95


>Z50109-5|CAA90438.1|  325|Caenorhabditis elegans Hypothetical
           protein C09H10.7 protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 207 SFLVMLTS*AKAMLESGFICQKHRDFVGLLSSHLFQLISTPNHYF 341
           SF+V   +   A    G    KHRD++ +   H  Q IS P+++F
Sbjct: 76  SFIVTRNAEKLATENCGGPDTKHRDYLVVCGEHKLQFISLPDYHF 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,656,099
Number of Sequences: 27780
Number of extensions: 338253
Number of successful extensions: 735
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)