Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0144
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 493 YKYKQLAYMLLYYY*VCSNNLYYCNSTYFFKFSLTDKRF 377
           Y ++   ++L  +  +C    YYC  + F   +LTD  F
Sbjct: 232 YGFQNFLFVLSTFS-ICITQFYYCYDSGFNSDNLTDVYF 269


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 163 VKVNSNCE*WI*KRQRATEVPIYE 92
           V+VNS  E W+  R+    VP  E
Sbjct: 127 VEVNSRPETWVLGREMCKAVPFVE 150


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 163 VKVNSNCE*WI*KRQRATEVPIYE 92
           V+VNS  E W+  R+    VP  E
Sbjct: 127 VEVNSRPETWVLGREMCKAVPFVE 150


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 471  YASCLYLYYRVHYSLNLLTDTRFVPGNTVV 560
            Y   +Y Y+  ++SLN   +    PG  V+
Sbjct: 2532 YPGDVYDYFNANFSLNYWIEKGADPGKIVM 2561


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 479 LFILVLSCSLFLKFIN*YQV 538
           L++L+L C++ L F   YQ+
Sbjct: 178 LWVLILICNIALAFKQRYQL 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,513
Number of Sequences: 336
Number of extensions: 2490
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)