Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0144
         (620 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    26   0.26 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    25   0.60 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   1.4  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    24   1.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   1.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   1.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   1.8  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   2.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   4.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   4.2  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 463 LYYY*VCSNNLYYCNSTYFFKFSLTDKRFRY 371
           LYY  + S+ LYY N+  F K    +   +Y
Sbjct: 263 LYYSPLASHGLYYVNTAPFMKSQFGENNVQY 293


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 463 LYYY*VCSNNLYYCNSTYFFKFSLTDKRFRY 371
           LYY  + S++LYY N   F K    +    Y
Sbjct: 266 LYYSPLTSHSLYYVNMEPFMKSQYEENNIEY 296


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 463 LYYY*VCSNNLYYCNSTYF 407
           LYY  V S +LYY N+  F
Sbjct: 265 LYYSPVASTSLYYVNTEQF 283


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 442 SNNLYYCNSTYFFKFSLTDKRFRYSN 365
           SNN  Y N+ Y + ++  +K+  Y N
Sbjct: 319 SNNYNYNNNNYKYNYNNYNKKLYYKN 344


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 463 LYYY*VCSNNLYYCNSTYF 407
           LYY  V S +LYY N+  F
Sbjct: 265 LYYSPVASTSLYYVNTEQF 283


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 463 LYYY*VCSNNLYYCNSTYF 407
           LYY  V S +LYY N+  F
Sbjct: 265 LYYSPVASTSLYYVNTEQF 283


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 463 LYYY*VCSNNLYYCNSTYFFK 401
           LYY  + S +LYY N+  F K
Sbjct: 266 LYYSPLSSRSLYYVNTKPFMK 286


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -2

Query: 463 LYYY*VCSNNLYYCNSTYFFKFSLTDKRFRYSN*KLIIILQ 341
           LYY  + S+NL Y N+  F K         Y   + I+  Q
Sbjct: 263 LYYSALSSHNLNYVNTEQFVKSQYQANNVHYQGKENILWTQ 303


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 463 LYYY*VCSNNLYYCNSTYFFK 401
           LYY    S NLYY N+    K
Sbjct: 264 LYYNSPSSENLYYVNTESLMK 284


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 463 LYYY*VCSNNLYYCNSTYFF--KFSLTDKRFR 374
           LYY  + S+NL Y N+  F   KF   D +++
Sbjct: 262 LYYSAMSSHNLNYVNTKQFTQGKFQANDIQYQ 293


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,436
Number of Sequences: 438
Number of extensions: 3067
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)