Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0143
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.2  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    22   4.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.3  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +2

Query: 161 EIRMYIIVFYNFTVHLILNVLSS*NNYELSFK*IPCSNYLTNVEYIFIV 307
           +I +Y    Y F ++LIL+ + S   Y    + +     +T+ E+ ++V
Sbjct: 133 DIEIYSQFLYGFMIYLILDTIKS--KYRQMHRLLANYKVITSDEFFYLV 179


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 435 ENLFIFVLNRINICFKKINYKLSAI 361
           E+LFI       + FK+I Y+L +I
Sbjct: 51  EHLFIVTHQAYELWFKQIIYELDSI 75


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 435 ENLFIFVLNRINICFKKINYKLSAI 361
           E+LFI       + FK+I Y+L +I
Sbjct: 51  EHLFIVTHQAYELWFKQIIYELDSI 75


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 435 ENLFIFVLNRINICFKKINYKLSAI 361
           E+LFI       + FK+I Y+L +I
Sbjct: 51  EHLFIVTHQAYELWFKQIIYELDSI 75


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 485 EIRIGTVLIKMNAIAVLT 538
           E+ +GT L+K+N  ++ T
Sbjct: 70  EVHVGTTLVKVNINSINT 87


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 216 MFYRVKIITSFPLNKSLVQIT 278
           +FYR K    F   K++VQIT
Sbjct: 50  VFYRAKDYAKFIHIKAVVQIT 70



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 167 RMYIIVFYNFTVHLILNVL 223
           +MY++ F NF   +++ +L
Sbjct: 154 QMYVLFFVNFAFFVVVKML 172


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 216 MFYRVKIITSFPLNKSLVQIT 278
           +FYR K    F   K++VQIT
Sbjct: 50  VFYRAKDYAKFIHIKAVVQIT 70



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 167 RMYIIVFYNFTVHLILNVL 223
           +MY++ F NF   +++ +L
Sbjct: 154 QMYVLFFVNFAFFVVVKML 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,564
Number of Sequences: 336
Number of extensions: 2750
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)