BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0140
(665 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D574D4 Cluster: PREDICTED: similar to CG32045-PB... 118 2e-25
UniRef50_Q7PPU7 Cluster: ENSANGP00000001136; n=2; Anopheles gamb... 100 3e-20
UniRef50_Q9VT28 Cluster: Protein furry; n=11; Coelomata|Rep: Pro... 92 1e-17
UniRef50_O94915 Cluster: Protein furry homolog-like; n=90; Eukar... 38 0.22
UniRef50_UPI0000DD8430 Cluster: PREDICTED: hypothetical protein;... 34 3.5
UniRef50_UPI0000DA25BF Cluster: PREDICTED: hypothetical protein;... 34 3.5
UniRef50_Q4R135 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_UPI0000EBDFB8 Cluster: PREDICTED: hypothetical protein;... 33 4.7
UniRef50_A7DCE7 Cluster: Penicillin-binding protein, 1A family; ... 33 4.7
UniRef50_A7CT94 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_Q5U6B9 Cluster: DNA-directed RNA polymerase; n=3; Beta ... 33 4.7
UniRef50_Q96A00 Cluster: Protein phosphatase 1 regulatory subuni... 33 6.2
UniRef50_Q5KCS5 Cluster: Expressed protein; n=2; Filobasidiella ... 33 8.2
UniRef50_Q9UGK3 Cluster: Signal-transducing adaptor protein 2; n... 33 8.2
>UniRef50_UPI0000D574D4 Cluster: PREDICTED: similar to CG32045-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG32045-PB, isoform B - Tribolium castaneum
Length = 3010
Score = 118 bits (283), Expect = 2e-25
Identities = 68/124 (54%), Positives = 78/124 (62%)
Frame = -3
Query: 639 MCTGLPPKPRVHESALQAACKLLDKRFFGSVGPAAD*RRQRLGEGRGTLDALLCTTYCXX 460
M TG P +P V ++ALQ +LLDKRFFG+VGP A+ +GR TLD LL TTY
Sbjct: 1325 MNTGCP-RPPVRDTALQLL-QLLDKRFFGTVGPLAESDLAEGDKGRSTLDTLLATTYRRS 1382
Query: 459 XXXXXXXXXXLHPELTMPMFSEITARFQTARTEVRQXXXXXXXXXLVNIELVDPNVPPAN 280
LHPELTMPMFSEIT RFQ+AR EVRQ L N+ELVDPNVPP N
Sbjct: 1383 QVHLSGQLALLHPELTMPMFSEITYRFQSARPEVRQLLLQYLLPWLHNMELVDPNVPPPN 1442
Query: 279 PLSY 268
P +Y
Sbjct: 1443 PHTY 1446
>UniRef50_Q7PPU7 Cluster: ENSANGP00000001136; n=2; Anopheles gambiae
str. PEST|Rep: ENSANGP00000001136 - Anopheles gambiae
str. PEST
Length = 3141
Score = 100 bits (240), Expect = 3e-20
Identities = 59/122 (48%), Positives = 69/122 (56%)
Frame = -3
Query: 621 PKPRVHESALQAACKLLDKRFFGSVGPAAD*RRQRLGEGRGTLDALLCTTYCXXXXXXXX 442
P+ VH +ALQ ++LDKRFFG+VGP R + GTLDA+L YC
Sbjct: 1337 PRVEVHSTALQLL-QILDKRFFGNVGPLQT-ENDREPDKIGTLDAVLSGAYCRSQMYLSR 1394
Query: 441 XXXXLHPELTMPMFSEITARFQTARTEVRQXXXXXXXXXLVNIELVDPNVPPANPLSYIQ 262
L PELTM MFSEIT RFQTAR E R L N+ELV +VPPA PLSYI
Sbjct: 1395 QIARLRPELTMSMFSEITYRFQTARAEARALLLQCLLPWLENVELVASSVPPATPLSYIM 1454
Query: 261 VH 256
+
Sbjct: 1455 YY 1456
>UniRef50_Q9VT28 Cluster: Protein furry; n=11; Coelomata|Rep: Protein
furry - Drosophila melanogaster (Fruit fly)
Length = 3479
Score = 91.9 bits (218), Expect = 1e-17
Identities = 55/119 (46%), Positives = 67/119 (56%)
Frame = -3
Query: 621 PKPRVHESALQAACKLLDKRFFGSVGPAAD*RRQRLGEGRGTLDALLCTTYCXXXXXXXX 442
P+ VH +ALQ ++LDKRFFGSV + + GTLD LL + YC
Sbjct: 1590 PRVEVHATALQLL-QILDKRFFGSVVGTLHSDSDKEDDKVGTLDVLLSSAYCRSQRFLSK 1648
Query: 441 XXXXLHPELTMPMFSEITARFQTARTEVRQXXXXXXXXXLVNIELVDPNVPPANPLSYI 265
L PELTM +FSEIT RFQ+AR +VR L N+ELV +VPPA PLSYI
Sbjct: 1649 QLAQLRPELTMSIFSEITHRFQSAREDVRALLLQCLLPWLQNMELVATSVPPATPLSYI 1707
>UniRef50_O94915 Cluster: Protein furry homolog-like; n=90;
Eukaryota|Rep: Protein furry homolog-like - Homo sapiens
(Human)
Length = 3013
Score = 37.9 bits (84), Expect = 0.22
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = -3
Query: 426 HPELTMPMFSEITARFQTARTEVRQXXXXXXXXXLVNIELVD 301
+PELT+ +FSEI+ R QTA RQ + NIELVD
Sbjct: 1279 YPELTLAIFSEISQRIQTAHPAGRQVMLHYLLPWMNNIELVD 1320
>UniRef50_UPI0000DD8430 Cluster: PREDICTED: hypothetical protein;
n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 720
Score = 33.9 bits (74), Expect = 3.5
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 506 PSPSRCLRQSAAGPTEPKNRLSRSLQAACKALSCTRGFGGSPVHMK 643
P PSR R+ + T P+ Q +AL C RG GG P++++
Sbjct: 497 PPPSRGHREKSGRETAPRGLPPWESQPRPRALPCRRGTGGKPLNLR 542
>UniRef50_UPI0000DA25BF Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 310
Score = 33.9 bits (74), Expect = 3.5
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 276 AGWPGARWGRPVQCSPAKARGTAGGADGLQYER--SGSAPLSR 398
AG PGAR G P + +P G AGG G++ R S SAP +R
Sbjct: 113 AGRPGARGGEPGRPAPRGQDGGAGGGPGVRRGRGHSPSAPAAR 155
>UniRef50_Q4R135 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 91
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 533 SAAGPTEPKNRLSRSLQAACKALSCTRGFGG-SPVHMK 643
S++GPT+ + R++ S+ +A + LS G GG PVH++
Sbjct: 30 SSSGPTKRRGRIAASIDSARRRLSLQHGAGGQDPVHLQ 67
>UniRef50_UPI0000EBDFB8 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 575
Score = 33.5 bits (73), Expect = 4.7
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 482 RSASNVPRPSPSRCLRQSAAGPTEPKNRLSRSLQAA--CKALSCTRGFGGSP 631
R+ASN P P PS LR P EP R +R +Q A SC G G P
Sbjct: 34 RAASNTP-PCPSPGLRPHPLSPNEPTARATRDVQPGGHSGAASCDLGCGLHP 84
>UniRef50_A7DCE7 Cluster: Penicillin-binding protein, 1A family;
n=3; Alphaproteobacteria|Rep: Penicillin-binding
protein, 1A family - Methylobacterium extorquens PA1
Length = 777
Score = 33.5 bits (73), Expect = 4.7
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +3
Query: 270 RIAGWPGARWGRPVQCSPAKARGTAGGADGLQYERSGSAPLSRRTWA------W*AQGVV 431
R AG P A GRP A+AR +GG G + R S L R +A W A G+
Sbjct: 85 RSAGGPRASAGRPASAPKARARKASGGGSGRRPPRRRSW-LGRLVYAGVVLGIWVAIGLA 143
Query: 432 GIVA 443
G++A
Sbjct: 144 GLIA 147
>UniRef50_A7CT94 Cluster: Putative uncharacterized protein; n=1;
Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
protein - Opitutaceae bacterium TAV2
Length = 572
Score = 33.5 bits (73), Expect = 4.7
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +2
Query: 389 VISENMGMVSSGCSWDSCLDRYSWDLQ*VVQRSASNVPRPSPSRCLRQSAAGPTEPKNRL 568
++ + G SG + D+C D SW Q + R+ASN P P PS + + A K
Sbjct: 27 LVKKVSGFARSGQA-DACSDVLSW--QRTLIRNASNKPNPKPSNAMNKPALPDLPAKGVA 83
Query: 569 SRSLQA 586
+ LQA
Sbjct: 84 TDILQA 89
>UniRef50_Q5U6B9 Cluster: DNA-directed RNA polymerase; n=3; Beta
vulgaris subsp. vulgaris|Rep: DNA-directed RNA
polymerase - Beta vulgaris subsp. vulgaris
Length = 598
Score = 33.5 bits (73), Expect = 4.7
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 162 RGLTRGPTTSKTRL-ITSFCTRFVGKKFIKV-YYVPVYRIAGWPGARWGRPV 311
RG R TT K I S C +F +KF + + + + R+ GW A GRPV
Sbjct: 398 RGHLRSITTKKECFHIASLCFKFWKEKFAHMDHLIGIIRLLGWFAASCGRPV 449
>UniRef50_Q96A00 Cluster: Protein phosphatase 1 regulatory subunit
14A; n=10; Tetrapoda|Rep: Protein phosphatase 1
regulatory subunit 14A - Homo sapiens (Human)
Length = 147
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 559 ESFVEELASSLQGAFVYPGLRGQPSAHEGS 648
E F++EL + LQG PGLR +H+GS
Sbjct: 105 EDFIQELLAKLQGLHRQPGLRQPSPSHDGS 134
>UniRef50_Q5KCS5 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1051
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +1
Query: 331 QEVLQEELTDFSTSGLEARRYLGEHGHGEL 420
Q VL LT STS L+A R L +H HGEL
Sbjct: 213 QPVLVSALTLASTSSLQALRLLCQHNHGEL 242
>UniRef50_Q9UGK3 Cluster: Signal-transducing adaptor protein 2;
n=14; Mammalia|Rep: Signal-transducing adaptor protein 2
- Homo sapiens (Human)
Length = 403
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = -1
Query: 623 PRSPGYTKAPC----KLLASSSTNDSSVPLVPLPTDEDN 519
P +PG APC K L+ +S+ D PL PLP E+N
Sbjct: 271 PSAPGPGPAPCTGGPKPLSPASSQDKLPPLPPLPNQEEN 309
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,411,262
Number of Sequences: 1657284
Number of extensions: 13467277
Number of successful extensions: 41275
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 39480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41260
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -