Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0139
         (381 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   1.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   1.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.6  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 102 HRHSNKCRL*YICIK 58
           H H + CR  YIC++
Sbjct: 172 HAHPDDCRKYYICLE 186


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 102 HRHSNKCRL*YICIK 58
           H H + CR  YIC++
Sbjct: 172 HAHPDDCRKYYICLE 186


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 340 DAHMPAAPQPSP 305
           D  +P AP+P+P
Sbjct: 83  DPEIPVAPEPAP 94


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 349 ARRDAHMPAAPQPSPKPQ 296
           A +   +P  P P+P+PQ
Sbjct: 385 ALKSDEIPPEPVPTPEPQ 402


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -1

Query: 222  DDRSNLCNASRFDAFEPLNKKL 157
            DD SN C    F     LN+ L
Sbjct: 970  DDFSNRCCGGSFPLLRSLNRGL 991


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,642
Number of Sequences: 336
Number of extensions: 1352
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)