Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0138
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    27   0.080
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   5.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   5.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.2  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 27.5 bits (58), Expect = 0.080
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
 Frame = +3

Query: 348 ITSSYYRGAHGIIIVYDCTDQDSF---SNVKQWLEEMDRYACDNVNK 479
           +   YYR  HG    + C     F   SN+  W E  DR  C  + +
Sbjct: 487 LCDKYYRCVHGKPTEFACRPGTVFHTQSNICDWPEHADREKCKKIEQ 533


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 504 SHTCSRRAVCSHCHKR 457
           +HT  +   C  CHKR
Sbjct: 3   THTGEKPFECQECHKR 18


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 504 SHTCSRRAVCSHCHKR 457
           +HT  +   C  CHKR
Sbjct: 156 THTGEKPFECQECHKR 171


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 236 SVYVSSANLSYRHDFPTPESPF 171
           ++Y S  NL+  H F   + PF
Sbjct: 215 AIYASLKNLNTDHGFLDGQKPF 236


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 417  MNPGLCNHIQ**FHVLLCSMM 355
            ++P LC HI   F VL  S M
Sbjct: 2345 IDPSLCTHINYGFAVLDSSSM 2365


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 504 SHTCSRRAVCSHCHKR 457
           +HT  +R  C  C+KR
Sbjct: 368 THTGEKRFACPICNKR 383


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 310 CNFIVLPFKSTVLIL 266
           CNFI+L + S  +IL
Sbjct: 322 CNFIILFYLSVFVIL 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,062
Number of Sequences: 336
Number of extensions: 2715
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)