Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0138
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 172 2e-43
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 134 3e-32
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 129 1e-30
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 129 1e-30
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 126 1e-29
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 124 3e-29
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 121 4e-28
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 117 5e-27
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 113 1e-25
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 113 1e-25
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 113 1e-25
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 113 1e-25
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 113 1e-25
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 107 7e-24
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 105 2e-23
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 105 2e-23
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 104 5e-23
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 103 6e-23
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 103 8e-23
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 102 2e-22
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 100 1e-21
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 100 1e-21
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 93 9e-20
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 91 5e-19
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 90 1e-18
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 89 1e-18
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 85 3e-17
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 84 5e-17
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 84 7e-17
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 83 1e-16
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 81 4e-16
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 81 5e-16
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 81 5e-16
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 81 7e-16
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 81 7e-16
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 79 3e-15
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 77 6e-15
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 67 7e-12
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 64 5e-11
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 64 5e-11
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 64 6e-11
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 64 6e-11
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 63 1e-10
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 61 4e-10
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 61 6e-10
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 58 3e-09
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 58 3e-09
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 58 5e-09
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 57 7e-09
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 57 7e-09
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 57 7e-09
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 57 7e-09
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 57 7e-09
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 56 2e-08
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 54 7e-08
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 49 2e-06
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 48 3e-06
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 48 3e-06
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 48 3e-06
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 48 3e-06
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 48 3e-06
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 48 6e-06
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 48 6e-06
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 48 6e-06
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 48 6e-06
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 46 2e-05
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 45 3e-05
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 45 3e-05
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 44 9e-05
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 43 1e-04
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 42 3e-04
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 41 5e-04
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 41 5e-04
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 41 5e-04
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 40 0.001
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 40 0.002
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 39 0.002
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 39 0.002
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 37 0.008
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 37 0.011
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 35 0.033
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 34 0.075
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 34 0.075
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 33 0.100
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 32 0.23
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 32 0.30
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 32 0.30
U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6... 31 0.53
AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threon... 31 0.53
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 31 0.70
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 31 0.70
U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical pr... 31 0.70
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 31 0.70
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 30 1.2
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 29 2.1
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 29 2.8
Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical p... 28 3.7
Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL032654-2|CAA21718.1| 257|Caenorhabditis elegans Hypothetical ... 28 3.7
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF040652-2|AAB95019.1| 221|Caenorhabditis elegans Hypothetical ... 28 4.9
Z73102-14|CAA97415.1| 297|Caenorhabditis elegans Hypothetical p... 27 8.6
U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 172 bits (418), Expect = 2e-43
Identities = 75/95 (78%), Positives = 87/95 (91%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GVDFKIRT++L+GKTIKLQIWDT GQERF+TITSSYYRGAHGII+VYD TDQ++F+NVKQ
Sbjct: 45 GVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ 104
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKRLSDFSTA 539
WL+E+DRYAC+NVNKLLVGNKCDLT KR + A
Sbjct: 105 WLQEIDRYACENVNKLLVGNKCDLTAKRAVETQAA 139
Score = 83.8 bits (198), Expect = 7e-17
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +1
Query: 133 MNPEYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
MNPEYDYLFKLLL GDSGVGKSCL LRFADDTYTESYIST+ K+
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI 50
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 134 bits (325), Expect = 3e-32
Identities = 56/89 (62%), Positives = 76/89 (85%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GVDFKIRT+D+NG+ +KLQIWDT GQERF+TITS+YYRG HG+++VYD T+ +SF NVK+
Sbjct: 44 GVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKR 103
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKRL 521
WL+E++ CD+V K+LVGNKC+ +R+
Sbjct: 104 WLQEIEN-NCDSVQKVLVGNKCEENERRV 131
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +1
Query: 142 EYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
+YD+LFKLL+ GDSGVGKS L LRFAD+T++E+YI+T+ K+
Sbjct: 6 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKI 49
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 129 bits (311), Expect = 1e-30
Identities = 51/88 (57%), Positives = 73/88 (82%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DFKIRT++L+GK IKLQIWDT GQERF+TIT++YYRGA GII+VYD T++ SF N+K
Sbjct: 42 GIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN 101
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKR 518
W+ ++ +A +V ++++GNKCD+ +R
Sbjct: 102 WIRNIEEHAASDVERMIIGNKCDIEERR 129
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +1
Query: 133 MNPEYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
M YDYLFKLLL GDSGVGK+C+ RF+DD++ S+IST+ K+
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKI 47
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 129 bits (311), Expect = 1e-30
Identities = 51/88 (57%), Positives = 73/88 (82%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DFKIRT++L+GK IKLQIWDT GQERF+TIT++YYRGA GII+VYD T++ SF N+K
Sbjct: 42 GIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN 101
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKR 518
W+ ++ +A +V ++++GNKCD+ +R
Sbjct: 102 WIRNIEEHAASDVERMIIGNKCDIEERR 129
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +1
Query: 133 MNPEYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
M YDYLFKLLL GDSGVGK+C+ RF+DD++ S+IST+ K+
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKI 47
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 126 bits (304), Expect = 1e-29
Identities = 52/89 (58%), Positives = 73/89 (82%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DFKI+T++L GK IKLQIWDT GQERF TIT+SYYRGA GI++VYD T+ SF N+ +
Sbjct: 43 GIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK 102
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKRL 521
WL +D +A ++V K+++GNKCD++ +R+
Sbjct: 103 WLRNIDEHASEDVVKMILGNKCDMSDRRV 131
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
YD LFKLLL GDSGVGK+C+ RF+DD + ++IST+ K+
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKI 48
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 124 bits (300), Expect = 3e-29
Identities = 49/82 (59%), Positives = 69/82 (84%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DFKIRT++L+GK IKLQIWDT GQERF+TIT++YYRGA GII+VYD T++ SF N+K
Sbjct: 42 GIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN 101
Query: 435 WLEEMDRYACDNVNKLLVGNKC 500
W+ ++ +A +V ++++GNKC
Sbjct: 102 WIRNIEEHAASDVERMIIGNKC 123
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +1
Query: 133 MNPEYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
M YDYLFKLLL GDSGVGK+C+ RF+DD++ S+IST+ K+
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKI 47
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 121 bits (291), Expect = 4e-28
Identities = 50/82 (60%), Positives = 67/82 (81%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DFKI+T++L GK IKLQIWDT GQERF TIT+SYYRGA GI++VYD T+ SF N+ +
Sbjct: 43 GIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK 102
Query: 435 WLEEMDRYACDNVNKLLVGNKC 500
WL +D +A ++V K+++GNKC
Sbjct: 103 WLRNIDEHASEDVVKMILGNKC 124
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
YD LFKLLL GDSGVGK+C+ RF+DD + ++IST+ K+
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKI 48
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 117 bits (282), Expect = 5e-27
Identities = 48/88 (54%), Positives = 71/88 (80%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GVDF ++T+ ++GK +KLQIWDTGGQERF+TIT SYYR A+GI++ YD T + SF ++++
Sbjct: 44 GVDFTMKTLVVDGKRVKLQIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQR 103
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKR 518
W++++ ++A NV KLL+G KCDL +R
Sbjct: 104 WIDDVSKFAAPNVVKLLIGTKCDLEDQR 131
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
+DYLFK++L GD GVGK+C+ RF + T+ + +T+
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTI 43
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 113 bits (271), Expect = 1e-25
Identities = 45/89 (50%), Positives = 69/89 (77%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DFK++TV K +KLQIWDT GQER++TIT++YYRGA G I++YD T+++SF++V+
Sbjct: 56 GIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD 115
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKRL 521
W ++ Y+ +N +LVGNKCD+ +R+
Sbjct: 116 WCTQIKTYSWENAQVVLVGNKCDMDSERV 144
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
+DY+FKLL+ G+S VGK+ R+ DD++T +++ST+ K+
Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKV 61
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 113 bits (271), Expect = 1e-25
Identities = 45/89 (50%), Positives = 69/89 (77%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DFK++TV K +KLQIWDT GQER++TIT++YYRGA G I++YD T+++SF++V+
Sbjct: 56 GIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD 115
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKRL 521
W ++ Y+ +N +LVGNKCD+ +R+
Sbjct: 116 WCTQIKTYSWENAQVVLVGNKCDMDSERV 144
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
+DY+FKLL+ G+S VGK+ R+ DD++T +++ST+ K+
Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKV 61
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 113 bits (271), Expect = 1e-25
Identities = 45/89 (50%), Positives = 69/89 (77%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DFK++TV K +KLQIWDT GQER++TIT++YYRGA G I++YD T+++SF++V+
Sbjct: 56 GIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD 115
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKRL 521
W ++ Y+ +N +LVGNKCD+ +R+
Sbjct: 116 WCTQIKTYSWENAQVVLVGNKCDMDSERV 144
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
+DY+FKLL+ G+S VGK+ R+ DD++T +++ST+ K+
Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKV 61
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 113 bits (271), Expect = 1e-25
Identities = 45/89 (50%), Positives = 69/89 (77%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DFK++TV K +KLQIWDT GQER++TIT++YYRGA G I++YD T+++SF++V+
Sbjct: 70 GIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD 129
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKRL 521
W ++ Y+ +N +LVGNKCD+ +R+
Sbjct: 130 WCTQIKTYSWENAQVVLVGNKCDMDSERV 158
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
+DY+FKLL+ G+S VGK+ R+ DD++T +++ST+ K+
Sbjct: 33 FDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKV 75
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 113 bits (271), Expect = 1e-25
Identities = 45/89 (50%), Positives = 69/89 (77%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DFK++TV K +KLQIWDT GQER++TIT++YYRGA G I++YD T+++SF++V+
Sbjct: 56 GIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD 115
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKRL 521
W ++ Y+ +N +LVGNKCD+ +R+
Sbjct: 116 WCTQIKTYSWENAQVVLVGNKCDMDSERV 144
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
+DY+FKLL+ G+S VGK+ R+ DD++T +++ST+ K+
Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKV 61
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 107 bits (256), Expect = 7e-24
Identities = 44/88 (50%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GVDF++ ++ ++G +KL IWDT GQERF+T+T SYYRGA G+I VYD T + SF +
Sbjct: 18 GVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH 77
Query: 435 WLEEMDRYAC-DNVNKLLVGNKCDLTLK 515
W++E+D Y DN+ K++V NK D+ K
Sbjct: 78 WMQEVDTYCTNDNIIKMMVANKIDMVRK 105
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 105 bits (253), Expect = 2e-23
Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GVDF++ ++ ++G +KL IWDT GQERF+T+T SYYRGA G+I VYD T + SF +
Sbjct: 45 GVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH 104
Query: 435 WLEEMDRYAC-DNVNKLLVGNKCDL 506
W++E+D Y DN+ K++V NK D+
Sbjct: 105 WMQEVDTYCTNDNIIKMMVANKIDM 129
Score = 35.9 bits (79), Expect = 0.019
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K+L+ G+SGVGKS L LRF DD + +T+
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATI 44
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 105 bits (252), Expect = 2e-23
Identities = 48/83 (57%), Positives = 60/83 (72%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GVDF I+TV + IKLQIWDT GQERF++IT SYYR AH I++VYD + Q SF + +
Sbjct: 41 GVDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPE 100
Query: 435 WLEEMDRYACDNVNKLLVGNKCD 503
WL E++ YA V K+LVGNK D
Sbjct: 101 WLGEIESYANRRVLKILVGNKVD 123
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 142 EYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
+Y YLFK++L G++GVGK+CL +F + +T+
Sbjct: 3 DYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATI 40
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 104 bits (249), Expect = 5e-23
Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNV-K 431
GVDFK++T+ L I+L++WDT G ER++TI +SYY AHG++ VYD T++ SF N+ K
Sbjct: 40 GVDFKLKTIKLGRDKIRLELWDTAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEK 99
Query: 432 QWLEEMDRYACDNVNKLLVGNKCDLTLKRLSDFSTA 539
WL+E+ ++A N +LVGNK D+ +R DF A
Sbjct: 100 YWLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDRA 135
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
Y++LFK+++ GD GKSC+ LRFA++++ +IST+ KL
Sbjct: 3 YNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKL 45
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 103 bits (248), Expect = 6e-23
Identities = 44/91 (48%), Positives = 63/91 (69%)
Frame = +3
Query: 231 HRELHQYYGVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQ 410
H E GV+F R++ + GKT+K QIWDT GQER++ ITS+YYRGA G ++VYD
Sbjct: 37 HLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH 96
Query: 411 DSFSNVKQWLEEMDRYACDNVNKLLVGNKCD 503
++ NV++WL+E+ +A N+ + VGNKCD
Sbjct: 97 VTYENVERWLKELRDHADQNIVIMPVGNKCD 127
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 142 EYDYLFKLLLKGDSGVGKSCL*LRFADDTY 231
EYDYLFK++L GDSGVGKS L RF + +
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF 36
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 103 bits (247), Expect = 8e-23
Identities = 45/88 (51%), Positives = 65/88 (73%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GV+F R V ++GK IKLQIWDT GQE F++IT SYYRGA G ++VYD T +D+F+++
Sbjct: 40 GVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS 99
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKR 518
WLE+ +++ N+ +L+GNK DL +R
Sbjct: 100 WLEDARQHSNSNMVIMLIGNKSDLEARR 127
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTY 231
Y YLFK ++ GD+GVGKSCL L+F D +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 102 bits (244), Expect = 2e-22
Identities = 43/84 (51%), Positives = 62/84 (73%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GV+F R++ + GKT+K QIWDT GQER++ ITS+YYRGA G ++VYD ++ NV++
Sbjct: 45 GVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVER 104
Query: 435 WLEEMDRYACDNVNKLLVGNKCDL 506
WL+E+ +A N+ +LVGNK DL
Sbjct: 105 WLKELRDHADQNIVIMLVGNKSDL 128
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1
Query: 142 EYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
EYDYLFK++L GDSGVGKS L RF + + ST+
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTI 44
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Frame = +3
Query: 225 YVHRELHQYY----GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIV 392
+V + H+Y G F +TV L+ TIK +IWDT GQER+ ++ YYRGA I+V
Sbjct: 39 FVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQAAIVV 98
Query: 393 YDCTDQDSFSNVKQWLEEMDRYACDNVNKLLVGNKCDLTLKRLSDFSTA 539
YD T+Q+SF K W++E+ R A N+ L GNK D+ KR ++ A
Sbjct: 99 YDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEA 147
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
FKL+L G+S VGKS L LRF + E ST+
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 52
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 99.5 bits (237), Expect = 1e-21
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+D++ + + + K +KLQIWDT GQERF+++T+SYYR A +++VYD ++ SF N +
Sbjct: 37 GIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRN 96
Query: 435 WLEEMDRYACDNVNKLLVGNKCDL 506
WL ++ Y + V LVGNKCDL
Sbjct: 97 WLSQIKEYGKEAVQVTLVGNKCDL 120
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTY-TESYISTM 255
K++L GDS GK+CL +R+ D + ++IST+
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTV 36
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 99.5 bits (237), Expect = 1e-21
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+D++ + + + K +KLQIWDT GQERF+++T+SYYR A +++VYD ++ SF N +
Sbjct: 37 GIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRN 96
Query: 435 WLEEMDRYACDNVNKLLVGNKCDL 506
WL ++ Y + V LVGNKCDL
Sbjct: 97 WLSQIKEYGKEAVQVTLVGNKCDL 120
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTY-TESYISTM 255
K++L GDS GK+CL +R+ D + ++IST+
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTV 36
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 93.5 bits (222), Expect = 9e-20
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GV+F R ++++G+ IKLQIWDT GQERF+ +T SYYRGA G ++VYD T + +++++
Sbjct: 45 GVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS 104
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKR 518
WL + N L+GNK DL +R
Sbjct: 105 WLADAKSLTNPNTAIFLIGNKADLEDQR 132
Score = 35.9 bits (79), Expect = 0.019
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTY 231
Y Y+FK ++ GD GVGKSCL +F + +
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 91.1 bits (216), Expect = 5e-19
Identities = 38/92 (41%), Positives = 61/92 (66%)
Frame = +3
Query: 237 ELHQYYGVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDS 416
+L GVDF ++TV+++G+ + LQ+WDT GQERF+++ SY+R A G I+VYD + S
Sbjct: 489 QLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQS 548
Query: 417 FSNVKQWLEEMDRYACDNVNKLLVGNKCDLTL 512
F V+ W+E + ++ +LVGNK D+ +
Sbjct: 549 FLRVRDWIETIKESTERSIPIILVGNKVDMRI 580
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/85 (44%), Positives = 59/85 (69%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GV+F + + + GK +K+QIWDT G ERF+ SSYYRGA G ++VYD + ++ +V+Q
Sbjct: 42 GVEFATKIISVEGKAVKVQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQ 101
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLT 509
WL+ + +A +++ LVGNK DL+
Sbjct: 102 WLKVLRDHANEDIVITLVGNKSDLS 126
Score = 34.7 bits (76), Expect = 0.043
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 133 MNPEYDYLFKLLLKGDSGVGKSCL*LRFADDTY 231
M EY YLFK++L G+ GVGKS L RF + +
Sbjct: 1 MGNEYYYLFKIVLIGNPGVGKSNLLSRFTRNEF 33
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 89.4 bits (212), Expect = 1e-18
Identities = 36/88 (40%), Positives = 60/88 (68%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G++F R ++++ K +KL +WDT GQERF+++ SYYR A G ++VYD T ++SF +++
Sbjct: 40 GIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEH 99
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKR 518
WL ++ R ++ +L+GNK DL R
Sbjct: 100 WLTDLQRLGDPDIVIVLIGNKSDLEADR 127
Score = 33.5 bits (73), Expect = 0.100
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 148 DYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
D++FK ++ GD GVGKS L LRF + + ST+
Sbjct: 4 DHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTL 39
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 85.0 bits (201), Expect = 3e-17
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 GVDFKIRTVDLN-GKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK 431
GVDF ++T+ + + I +Q+WDT GQERF++IT Y+R A G+++++D T + SF NV+
Sbjct: 236 GVDFTVKTMKIPPNRAIAMQLWDTAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNVR 295
Query: 432 QWLEEMDRYACDNVNKLLVGNKCDL 506
W++ + D LVGNK DL
Sbjct: 296 NWIDSVRAGVDDATVMCLVGNKMDL 320
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 DYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
D +FK++ GDS VGK+C RF + + + +T+
Sbjct: 200 DRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATI 235
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 84.2 bits (199), Expect = 5e-17
Identities = 36/88 (40%), Positives = 59/88 (67%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DF +T+ L +T++LQ+WDT GQERF+++ SY R + ++VYD T+ +SF +
Sbjct: 44 GIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSK 103
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKR 518
W++++ +V +LVGNK DL+ KR
Sbjct: 104 WIDDVRTERGSDVIIMLVGNKTDLSDKR 131
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
FKL+ G+ VGK+ L RF D++ +Y +T+
Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATI 43
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 83.8 bits (198), Expect = 7e-17
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +1
Query: 133 MNPEYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
MNPEYDYLFKLLL GDSGVGKSCL LRFADDTYTESYIST+ K+
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI 50
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGG 329
GVDFKIRT++L+GKTIKLQIWDT G
Sbjct: 45 GVDFKIRTIELDGKTIKLQIWDTAG 69
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 83.0 bits (196), Expect = 1e-16
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
G+DF +T+ L +TI+LQ+WDT GQERF+++ SY R + ++VYD T+ +SF +
Sbjct: 45 GIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTK 104
Query: 435 WLEEM-DRYACDNVNKLLVGNKCDLTLKR 518
W++++ + CD V +LVGNK DL KR
Sbjct: 105 WVDDVRNERGCD-VIIVLVGNKTDLADKR 132
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
FKL+ G+ VGK+ + RF D++ +Y +T+
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATI 44
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 81.4 bits (192), Expect = 4e-16
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = +3
Query: 300 IKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYA-CDNVN 476
++LQ+WDT GQERF+ + Y R A +IVYD TD+++F +V++WL+++DR + ++ N
Sbjct: 105 VRLQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDAN 164
Query: 477 KLLVGNKCDLTLKR 518
L+GNK DL KR
Sbjct: 165 VYLIGNKTDLVEKR 178
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 81.0 bits (191), Expect = 5e-16
Identities = 31/77 (40%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 291 GKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYA-CD 467
G+ + LQ+WDT GQERF+++T++++R A G I+++D T++ SF N++ WL ++ +A C+
Sbjct: 62 GQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCE 121
Query: 468 NVNKLLVGNKCDLTLKR 518
+ ++ GNK DL +R
Sbjct: 122 QPDIIICGNKADLENRR 138
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 142 EYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLK 270
+YDYL K L GDSGVGK+ R+ D+T+T +IST+ K
Sbjct: 3 DYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFK 45
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 81.0 bits (191), Expect = 5e-16
Identities = 31/77 (40%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 291 GKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYA-CD 467
G+ + LQ+WDT GQERF+++T++++R A G I+++D T++ SF N++ WL ++ +A C+
Sbjct: 62 GQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCE 121
Query: 468 NVNKLLVGNKCDLTLKR 518
+ ++ GNK DL +R
Sbjct: 122 QPDIIICGNKADLENRR 138
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 142 EYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLK 270
+YDYL K L GDSGVGK+ R+ D+T+T +IST+ K
Sbjct: 3 DYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFK 45
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 80.6 bits (190), Expect = 7e-16
Identities = 32/65 (49%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 GVDFKIRTVDLN-GKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK 431
GVDF R ++L G +KLQ+WDT GQE+F++IT SYYR + G++ +YD T+++SF +V+
Sbjct: 51 GVDFYARMIELRPGYRVKLQLWDTAGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVE 110
Query: 432 QWLEE 446
W++E
Sbjct: 111 NWVKE 115
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 139 PEYDYLFKLLLKGDSGVGKSCL*LRFADDTYTE 237
P + Y ++L++ GDS VGKS L F + E
Sbjct: 12 PLFHYQYRLIVIGDSTVGKSSLLRYFTEGKMAE 44
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 80.6 bits (190), Expect = 7e-16
Identities = 32/88 (36%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFK-TITSSYYRGAHGIIIVYDCTDQDSFSNVK 431
GVDF+ R+ + + +++Q+WDT GQER++ +I + YYR + ++ VYD T ++SF+++
Sbjct: 134 GVDFRERSCVIENELLRVQLWDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLA 193
Query: 432 QWLEEMDRYAC---DNVNKLLVGNKCDL 506
W++E +++ V ++L+GNKCD+
Sbjct: 194 LWIKECEKHGLVGDSEVPRILIGNKCDV 221
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
FK+++ G++ VGK+CL RF + E +T+
Sbjct: 101 FKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATI 133
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/94 (37%), Positives = 62/94 (65%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GV+F + + ++ ++L++WDT GQE F++I +YYR A G ++VYD T + SF +++Q
Sbjct: 40 GVEFGYKDLQIDKYKVRLRVWDTCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQ 99
Query: 435 WLEEMDRYACDNVNKLLVGNKCDLTLKRLSDFST 536
WL ++ ++ + +L+GNK D LK + D +T
Sbjct: 100 WLSDLRQHGHPEMVIMLIGNKSD--LKAVRDVTT 131
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +1
Query: 148 DYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
D++FK ++ GD GVGKS L LRF D+ + + +T+
Sbjct: 4 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTL 39
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 78.6 bits (185), Expect = 3e-15
Identities = 37/96 (38%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Frame = +3
Query: 255 GVDFKIRTVDLN-GKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK 431
G+DFK + V LN G++I+LQ+WDT GQERF+ + +Y R A ++V D +D++ ++
Sbjct: 40 GIDFKHKIVQLNDGQSIRLQLWDTAGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLI 99
Query: 432 QWLEEMDRYACDNVNKLLVGNKCDLTLKRLSDFSTA 539
+W +D+ D + ++VGNK DL ++ S TA
Sbjct: 100 RWKGIIDKNKSDFTSTIIVGNKHDLVSEKRSPRLTA 135
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLK 270
K+++ G+SG GK+ L F D+T+ ++T+ K
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFK 44
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 77.4 bits (182), Expect = 6e-15
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +3
Query: 264 FKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLE 443
F+ +TV++ L IWDT GQE++ + YYRG++G+++V+D TD+ SF VK W+
Sbjct: 49 FQNKTVNVEDCQADLHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVL 108
Query: 444 EMDRYACDNVNKLLVGNKCDLTLKR 518
E+ + L+VGNK DL +R
Sbjct: 109 EIKTCLGNTAEILIVGNKIDLEEER 133
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +1
Query: 151 YLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
+ FK++L G+ VGKS L LRF ++ ++ ++ST+
Sbjct: 11 FKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTI 45
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Frame = +3
Query: 225 YVHRELHQYY----GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIV 392
YV+R Y G DF R V+++ +T+ LQIWDT GQERF+++ ++YRGA ++
Sbjct: 29 YVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQSLGVAFYRGADCCVLA 88
Query: 393 YDCTDQDSFSNVKQWLEEMDRYAC----DNVNKLLVGNKCDLTLKR 518
+D T+ SF ++ W +E A D+ +L+GNK DL +R
Sbjct: 89 FDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDLESQR 134
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 154 LFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
L K+++ GDSGVGK+ L ++ + ++ Y +T+
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATI 42
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 67.3 bits (157), Expect = 7e-12
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 261 DFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWL 440
DF + ++++G+ L+I DT G E+F ++ Y + G ++VY T Q +F +++
Sbjct: 38 DFYRKEIEVDGQPSVLEILDTAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMK 97
Query: 441 EEMDRY-ACDNVNKLLVGNKCDLTLKR 518
E++ R +NV LLVGNKCDL+ +R
Sbjct: 98 EQIVRVKGSENVPILLVGNKCDLSHQR 124
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
FK+++ G GVGKS L ++F T+ E Y T+
Sbjct: 4 FKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTI 36
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 64.5 bits (150), Expect = 5e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTI-KLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK 431
GVDF ++ + ++ T+ LQIWD GQ+R+ +T YY+ AH IIV D T + +
Sbjct: 45 GVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGAL 104
Query: 432 QWLEEMDRYAC----DNVNKLLVGNKCDLTLK 515
+W ++D+ V +L+ NKCD+ K
Sbjct: 105 RWKTDLDQKVTLADGSPVPAILLANKCDIDNK 136
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 64.5 bits (150), Expect = 5e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTI-KLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK 431
GVDF ++ + ++ T+ LQIWD GQ+R+ +T YY+ AH IIV D T + +
Sbjct: 45 GVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGAL 104
Query: 432 QWLEEMDRYAC----DNVNKLLVGNKCDLTLK 515
+W ++D+ V +L+ NKCD+ K
Sbjct: 105 RWKTDLDQKVTLADGSPVPAILLANKCDIDNK 136
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 64.1 bits (149), Expect = 6e-11
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 273 RTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMD 452
+ V ++G+T L I DT GQE + + Y R G ++V+ + SF NV + E++
Sbjct: 42 KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIR 101
Query: 453 RYA-CDNVNKLLVGNKCDLTLKRLSDFST 536
R D+V +LVGNKCDL+ R DF T
Sbjct: 102 RVKDSDDVPMVLVGNKCDLS-SRSVDFRT 129
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
+KL++ GD GVGKS L ++ + + E Y T+
Sbjct: 4 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTI 36
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 64.1 bits (149), Expect = 6e-11
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 273 RTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMD 452
+ V ++G+T L I DT GQE + + Y R G ++V+ + SF NV + E++
Sbjct: 45 KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIR 104
Query: 453 RYA-CDNVNKLLVGNKCDLTLKRLSDFST 536
R D+V +LVGNKCDL+ R DF T
Sbjct: 105 RVKDSDDVPMVLVGNKCDLS-SRSVDFRT 132
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
+KL++ GD GVGKS L ++ + + E Y T+
Sbjct: 7 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTI 39
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 62.9 bits (146), Expect = 1e-10
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Frame = +3
Query: 315 WDTGGQERFK-TITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYAC---DNVNKL 482
WDT GQER++ +I + YYR + ++ VYD T ++SF+++ W++E +++ V ++
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRI 60
Query: 483 LVGNKC 500
L+GNKC
Sbjct: 61 LIGNKC 66
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +3
Query: 234 RELHQYYGVDFKIRTVDL-NGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQ 410
+ HQ G+DF R + L + + +Q+WD GGQ + Y GA+ + +VYD T+
Sbjct: 62 KSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQSIAGEMIDKYLTGANIVFLVYDVTNS 121
Query: 411 DSFSNVKQWLEEMDRYACDN---VNKLLVGNKCDLTLKRL 521
SF N WL + + + V +L+GNK DL +R+
Sbjct: 122 KSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRV 161
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 148 DYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
D + K+++ GD GK+ + RFA +++ +SY T+
Sbjct: 33 DKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTL 68
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +1
Query: 142 EYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLKL 273
+YD+LFKLL+ GDSGVGKS L LRFAD+T++E+YI+T+ K+
Sbjct: 6 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKI 49
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDT 323
GVDFKIRT+D+NG+ +KLQIWDT
Sbjct: 44 GVDFKIRTMDINGQRVKLQIWDT 66
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ 434
GV+ N I+ +WDT GQE+F + YY II++D T + ++ NV
Sbjct: 43 GVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPN 102
Query: 435 WLEEMDRYACDNVNKLLVGNKCDL 506
W ++ R C+N+ +L GNK D+
Sbjct: 103 WHRDLAR-VCENIPIVLCGNKVDV 125
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
FKL+L GD G GK+ R + + Y++T+
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 42
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 58.4 bits (135), Expect = 3e-09
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +3
Query: 285 LNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYAC 464
++ + +L+I DT G E+F + +YYR A G ++V+ + +F N+KQ ++
Sbjct: 46 VDAENARLEILDTAGTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRG 105
Query: 465 DNVNKLLVGNKCDLTLKRLSDFSTA 539
V +LVGNK DL R D S A
Sbjct: 106 KEVPMILVGNKSDLAETRQVDESEA 130
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 273 RTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMD 452
+ V+++G+ L+I DT G E+F + Y + G ++VY T Q +F+++ +++
Sbjct: 42 KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQIL 101
Query: 453 RYA-CDNVNKLLVGNKCDLTLKRL 521
R D V +LVGNKCDL +R+
Sbjct: 102 RVKDTDEVPMILVGNKCDLEDERV 125
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
+K+++ G GVGKS L ++F + E Y T+
Sbjct: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI 36
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 57.6 bits (133), Expect = 5e-09
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 303 KLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYA-CDNVNK 479
KL+I DT GQE F T+ Y R G +IV+ TD++SF VK+ E + R D+
Sbjct: 66 KLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPI 125
Query: 480 LLVGNKCDLTLKRLSDF 530
+LVGNK DL +R F
Sbjct: 126 ILVGNKADLENERHVSF 142
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 57.2 bits (132), Expect = 7e-09
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 303 KLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYA-CDNVNK 479
KL+I DT GQE F T+ Y R G +IV+ TD++SF VK+ E + R D+
Sbjct: 66 KLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPI 125
Query: 480 LLVGNKCDLTLKR 518
+LVGNK DL +R
Sbjct: 126 ILVGNKADLENER 138
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 57.2 bits (132), Expect = 7e-09
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 303 KLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYA-CDNVNK 479
KL+I DT GQE F T+ Y R G +IV+ TD++SF VK+ E + R D+
Sbjct: 66 KLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPI 125
Query: 480 LLVGNKCDLTLKR 518
+LVGNK DL +R
Sbjct: 126 ILVGNKADLENER 138
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 57.2 bits (132), Expect = 7e-09
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 270 IRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEE 446
+ ++++GK ++L +WDT GQE + + Y I++ + DS N+ ++W E
Sbjct: 43 VADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE 102
Query: 447 MDRYACDNVNKLLVGNKCDL 506
+ R+ C NV +LVGNK DL
Sbjct: 103 V-RHFCPNVPIILVGNKRDL 121
Score = 31.9 bits (69), Expect = 0.30
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
KL++ GD GK+CL + F+ D + + Y+ T+
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTV 38
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 57.2 bits (132), Expect = 7e-09
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 303 KLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYA-CDNVNK 479
KL+I DT GQE F T+ Y R G +IV+ TD++SF VK+ E + R D+
Sbjct: 66 KLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPI 125
Query: 480 LLVGNKCDLTLKR 518
+LVGNK DL +R
Sbjct: 126 ILVGNKADLENER 138
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 57.2 bits (132), Expect = 7e-09
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 270 IRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEE 446
+ ++++GK ++L +WDT GQE + + Y I++ + DS N+ ++W E
Sbjct: 43 VADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE 102
Query: 447 MDRYACDNVNKLLVGNKCDL 506
+ R+ C NV +LVGNK DL
Sbjct: 103 V-RHFCPNVPIILVGNKRDL 121
Score = 31.9 bits (69), Expect = 0.30
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
KL++ GD GK+CL + F+ D + + Y+ T+
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTV 38
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 VDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSF-SNVKQ 434
V F +R + TIKL WD GGQ RF+++ Y RG + I+ + D D++ ++ +
Sbjct: 53 VGFNMRKITKGNVTIKL--WDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNE 110
Query: 435 WLEEMDRYACDNVNKLLVGNKCDL 506
++ +D+ D + L++GNK DL
Sbjct: 111 LMQLLDKPQLDAIPVLVLGNKKDL 134
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 VDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSF-SNVKQ 434
V F +R + TIKL WD GGQ RF+++ Y RG + I+ + D D++ ++ +
Sbjct: 53 VGFNMRKITKGNVTIKL--WDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNE 110
Query: 435 WLEEMDRYACDNVNKLLVGNKCDL 506
++ +D+ D + L++GNK DL
Sbjct: 111 LMQLLDKPQLDAIPVLVLGNKKDL 134
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 54.0 bits (124), Expect = 7e-08
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 273 RTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMD 452
+ V L+G+ + I DT GQE + I +YYR G I V+ D +SF ++ E++
Sbjct: 56 KKVVLDGEECSIDILDTAGQEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQIL 115
Query: 453 RY--ACDNVNKLLVGNKCDLTLKRL 521
R + +V +LVGNK D+ +R+
Sbjct: 116 RVKNSDSSVPIVLVGNKGDMRDQRV 140
Score = 34.7 bits (76), Expect = 0.043
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 139 PEYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMA 258
P+ + K+++ G GVGKS L L+F D + E Y T A
Sbjct: 12 PQQQVVHKVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKA 51
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 VDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQW 437
V F + TV K IK +WD GGQ++ + + YY G +I V D D+D +
Sbjct: 45 VGFNVETVTY--KNIKFNVWDVGGQDKIRPLWRHYYTGTQALIFVMDAADRDRVDEARME 102
Query: 438 LEEM--DRYACDNVNKLLVGNKCDL 506
L + DR + + L+ NK DL
Sbjct: 103 LHRIINDREMKEAI-ILVFANKQDL 126
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEMDR 455
V ++G+ I L +WDT GQE + + Y ++ + + SF NV+ +W E+
Sbjct: 44 VMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSH 103
Query: 456 YACDNVNKLLVGNKCDL 506
+ C N +LVG K DL
Sbjct: 104 H-CPNTPIILVGTKADL 119
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL + + + + YI T+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 36
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEMDR 455
V ++G+ I L +WDT GQE + + Y ++ + + SF NV+ +W E+
Sbjct: 44 VMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSH 103
Query: 456 YACDNVNKLLVGNKCDL 506
+ C N +LVG K DL
Sbjct: 104 H-CPNTPIILVGTKADL 119
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL + + + + YI T+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 36
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEMDR 455
V ++G+ I L +WDT GQE + + Y ++ + + SF NV+ +W E+
Sbjct: 44 VMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSH 103
Query: 456 YACDNVNKLLVGNKCDL 506
+ C N +LVG K DL
Sbjct: 104 H-CPNTPIILVGTKADL 119
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL + + + + YI T+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 36
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEMDR 455
V ++G+ I L +WDT GQE + + Y ++ + + SF NV+ +W E+
Sbjct: 44 VMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSH 103
Query: 456 YACDNVNKLLVGNKCDL 506
+ C N +LVG K DL
Sbjct: 104 H-CPNTPIILVGTKADL 119
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL + + + + YI T+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 36
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEMDR 455
V ++G+ I L +WDT GQE + + Y ++ + + SF NV+ +W E+
Sbjct: 44 VMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSH 103
Query: 456 YACDNVNKLLVGNKCDL 506
+ C N +LVG K DL
Sbjct: 104 H-CPNTPIILVGTKADL 119
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL + + + + YI T+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 36
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 48.0 bits (109), Expect = 4e-06
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +3
Query: 264 FKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLE 443
F ++TV G I+L +WD GGQ + S+YY +I V D D+ F + L
Sbjct: 51 FNVKTVAAMGD-IRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELG 109
Query: 444 E-MDRYACDNVNKLLVGNKCDLTLKRLSD 527
E +D V L+ NK DL S+
Sbjct: 110 ELLDEEKLRKVPVLIFANKQDLVTAASSE 138
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 47.6 bits (108), Expect = 6e-06
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEEMDR 455
+ L+G + L +WDT GQE + + Y I+ + SF NV +W+ E+ R
Sbjct: 48 MSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEI-R 106
Query: 456 YACDNVNKLLVGNKCDL 506
C + +LVG K DL
Sbjct: 107 QHCPDAPVILVGTKLDL 123
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+C+ + + D++ Y+ T+
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV 40
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 47.6 bits (108), Expect = 6e-06
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEEMDR 455
+ L+G + L +WDT GQE + + Y I+ + SF NV +W+ E+ R
Sbjct: 48 MSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEI-R 106
Query: 456 YACDNVNKLLVGNKCDL 506
C + +LVG K DL
Sbjct: 107 QHCPDAPVILVGTKLDL 123
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+C+ + + D++ Y+ T+
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV 40
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 VDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQW 437
+ F + TV+ K I +WD GGQ++ + + Y++ G+I V D D++ ++
Sbjct: 49 IGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREE 106
Query: 438 LEEM-DRYACDNVNKLLVGNKCDL 506
L +M + + L+ NK DL
Sbjct: 107 LHKMLNEDELRDATLLVFANKQDL 130
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 TVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEMD 452
+V ++ K + ++DT GQ ++ I Y A+ ++ + D+ + + + W+ E+
Sbjct: 44 SVHIDNKNYAVNLFDTAGQGNYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIR 103
Query: 453 RYACDNVNKLLVGNKCDL 506
+YA DNV +LVG K DL
Sbjct: 104 KYAGDNVPIMLVGTKNDL 121
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 VDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQW 437
+ F + TV+ K I +WD GGQ++ + + Y++ G+I V D D++ ++
Sbjct: 49 IGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREE 106
Query: 438 LEEM-DRYACDNVNKLLVGNKCDL 506
L +M + + L+ NK DL
Sbjct: 107 LHKMLNEDELRDATLLVFANKQDL 130
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEEMDR 455
V+LN L WD GGQE + + ++YY A+ +I V D T D F V Q+ E M
Sbjct: 64 VELNNTC--LHFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMAN 121
Query: 456 YACDNVNKLLVGNKCDL 506
N+ L+ NK ++
Sbjct: 122 EIVQNIPVLVAVNKSEM 138
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEMDR 455
V ++G+ I L +WDT GQ+ + + ++ + + SF NV+ +W E+
Sbjct: 44 VMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSH 103
Query: 456 YACDNVNKLLVGNKCDL 506
+ C N +LVG K DL
Sbjct: 104 H-CPNTPIILVGTKADL 119
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL L + + + YI T+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV 36
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEMDR 455
V ++G+ I L +WDT GQ+ + + ++ + + SF NV+ +W E+
Sbjct: 44 VMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSH 103
Query: 456 YACDNVNKLLVGNKCDL 506
+ C N +LVG K DL
Sbjct: 104 H-CPNTPIILVGTKADL 119
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL L + + + YI T+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV 36
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 142 EYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTMAWTLK 270
+YDYL K L GD GVGK+ R+ D+T+T +IST+ K
Sbjct: 3 DYDYLIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFK 45
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +3
Query: 258 VDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQW 437
+ F + TV+ K I +WD GGQ++ + + Y++ G+I V D D++ ++
Sbjct: 49 IGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREE 106
Query: 438 LEEM 449
L M
Sbjct: 107 LMRM 110
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 43.6 bits (98), Expect = 9e-05
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 294 KTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMD 452
+T L++WD GG + ++ GA G I+V+D T++ S N+ WL +D
Sbjct: 64 RTELLELWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRSEENLATWLTMLD 116
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 330 QERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYACDNVNKLLVGNKCDL 506
QE+F + YY II++D T + ++ NV W ++ R C+N+ +L GNK D+
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDLAR-VCENIPIVLCGNKVDV 59
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 306 LQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDR-YACDNVNKL 482
L++ DT GQ+ + S +G I+VY D+ SF E++ R Y ++ +
Sbjct: 63 LRVTDTAGQQEYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIV 122
Query: 483 LVGNKCDLTLKRL 521
+VGNK DL+ +R+
Sbjct: 123 IVGNKTDLSTQRV 135
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K+ + G VGKS L LRF + + E Y ST+
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTI 46
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
+DYLFK++L GD GVGK+C+ RF + T+ + +T+
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTI 43
Score = 40.3 bits (90), Expect = 9e-04
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQ 332
GVDF ++T+ ++GK +KLQIWDT G+
Sbjct: 44 GVDFTMKTLVVDGKRVKLQIWDTAGE 69
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +3
Query: 258 VDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQW 437
+ F + V+ K +K Q+WD GGQ + YY II V D D+D +Q
Sbjct: 48 IGFNVEQVEY--KNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQE 105
Query: 438 LEEM 449
L M
Sbjct: 106 LATM 109
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 FKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLE 443
F I+TV K +L +WD GGQ+ ++ +Y+ +I V D +D++ + L+
Sbjct: 50 FDIKTVHF--KDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELK 107
Query: 444 E-MDRYACDNVNKLLVGNKCDL 506
+ + + L++ NK DL
Sbjct: 108 KLLGEERLAGASLLVLANKSDL 129
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGGQE 335
GV+F R V ++GK IKLQ+WDT GQE
Sbjct: 40 GVEFGARMVTIDGKQIKLQMWDTAGQE 66
Score = 40.3 bits (90), Expect = 9e-04
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTY 231
Y YLFK ++ GD+GVGKSCL L+F D +
Sbjct: 3 YAYLFKHIIIGDTGVGKSCLLLQFTDKRF 31
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 TVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEMD 452
TV + G+ L ++DT GQE + + Y ++ + SF NV++ W+ E+
Sbjct: 43 TVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEIS 102
Query: 453 RYACDNVNKLLVGNKCDL 506
+ C LLVG + DL
Sbjct: 103 HH-CSKTPFLLVGTQVDL 119
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL + + + + Y+ T+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 TVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEMD 452
TV + G+ L ++DT GQE + + Y ++ + SF NV++ W+ E+
Sbjct: 40 TVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEIS 99
Query: 453 RYACDNVNKLLVGNKCDL 506
+ C LLVG + DL
Sbjct: 100 HH-CSKTPFLLVGTQVDL 116
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL + + + + Y+ T+
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 33
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 282 DLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYA 461
+++ + + IWD GGQE + S+YY +I+V D +D +K+ L M ++
Sbjct: 55 EVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHE 114
Query: 462 -CDNVNKLLVGNKCDL 506
+ L++ NK DL
Sbjct: 115 DLARAHILVLANKQDL 130
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 TVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEMD 452
T + G+ L ++DT GQE + + Y ++ + SF NV++ W+ E+
Sbjct: 43 TAMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEIS 102
Query: 453 RYACDNVNKLLVGNKCDL 506
+ C LLVG + DL
Sbjct: 103 HH-CSKTPFLLVGTQVDL 119
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL + + + + Y+ T+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 294 KTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFS 422
+T L I+D GG + + I S+YY HGII V D + ++F+
Sbjct: 67 ETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFT 109
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 294 KTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFS 422
+T L I+D GG + + I S+YY HGII V D + ++F+
Sbjct: 67 ETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFT 109
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 37.1 bits (82), Expect = 0.008
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDTGG 329
GV+F R ++++G+ IKLQIWDT G
Sbjct: 45 GVEFGTRIIEVSGQKIKLQIWDTAG 69
Score = 35.9 bits (79), Expect = 0.019
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 145 YDYLFKLLLKGDSGVGKSCL*LRFADDTY 231
Y Y+FK ++ GD GVGKSCL +F + +
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 258 VDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQW 437
+ F + TV + I L +WD GGQ++ + + Y+ ++ V D +D + K+
Sbjct: 49 IGFNVETVTF--QKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEE 106
Query: 438 L 440
L
Sbjct: 107 L 107
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.033
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +3
Query: 258 VDFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQW 437
+ F I T+ K +L WD GG + + + YY A I V D + FS
Sbjct: 404 IGFNIETIHY--KNYRLNFWDVGGLPKLRHLWKHYYSNAQAIFYVIDGYAVERFSEA--- 458
Query: 438 LEEMDRYACD 467
++E++R D
Sbjct: 459 IKELNRVMSD 468
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 33.9 bits (74), Expect = 0.075
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 142 EYDYLFKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
+Y YLFK++L ++GVGK+CL +F + +T+
Sbjct: 3 DYKYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATI 40
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 33.9 bits (74), Expect = 0.075
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 372 AHGIIIVYDCTDQDSFSNVKQWLEEMDRYACDNVNKLLVGNKCDLTLKRL 521
++GIII+Y D+ SF + + + ++ N +LVG+K D+ +KR+
Sbjct: 289 SNGIIIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRV 338
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 33.5 bits (73), Expect = 0.100
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 151 YLFKLLLKGDSGVGKSCL*LRFADDTYTESYIST 252
Y K++++GD VGK+CL R ++ E Y++T
Sbjct: 42 YNLKIVIRGDRNVGKTCLWKRLQGLSFQEEYVAT 75
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 32.3 bits (70), Expect = 0.23
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +3
Query: 303 KLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEE 446
++Q+WD G ++++ + A G+I+V + ++ S+++QW E
Sbjct: 114 EIQLWDVSGDKKYEDCWPAIKENAEGVILVVN-PEEHKGSDLQQWFYE 160
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 31.9 bits (69), Expect = 0.30
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIWDT 323
G+DF +T+ L +T++LQ+WDT
Sbjct: 44 GIDFLSKTMYLEDRTVRLQMWDT 66
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 31.9 bits (69), Expect = 0.30
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 255 GVDF-KIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGI-IIVYDCTDQDSFSNV 428
G D+ K+ T LNG+ + L+I T+ +S +R + + I++Y+ ++ SF
Sbjct: 209 GNDYTKMTTFLLNGREVTLEILLES------TLENSPFRQSKTLYIVMYNMDNRQSFIYA 262
Query: 429 KQWLEEMDRYACDN---VNKLLVGNKCDL 506
Q LE + +N + L+GNKCDL
Sbjct: 263 TQILERITLANLNNPVPLQLFLIGNKCDL 291
>U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6
protein.
Length = 636
Score = 31.1 bits (67), Expect = 0.53
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 306 LQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYACDNVN 476
L I T GQ R+ + + YRG++ + + TD+DS W E D Y + +N
Sbjct: 265 LTIIKTIGQGRYGEVRKALYRGSYVAVKTFYTTDEDS------WKNERDVYQTNMIN 315
>AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threonine
kinase SMA-6 protein.
Length = 636
Score = 31.1 bits (67), Expect = 0.53
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 306 LQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYACDNVN 476
L I T GQ R+ + + YRG++ + + TD+DS W E D Y + +N
Sbjct: 265 LTIIKTIGQGRYGEVRKALYRGSYVAVKTFYTTDEDS------WKNERDVYQTNMIN 315
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 30.7 bits (66), Expect = 0.70
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 294 KTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQ 410
+ + +D GQ ++++ SY+ + G+I V D +D+
Sbjct: 61 QNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDR 99
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 30.7 bits (66), Expect = 0.70
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +3
Query: 261 DFKIRTVDLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-W 437
D R + G + L I DT F + A ++V+ D SF + W
Sbjct: 52 DLHSREFRIQGVPLPLDILDTNFN--FPDMRRLSIASASAFLLVFSVDDVTSFKEMSDIW 109
Query: 438 LEEMDRYA-CDNVNKLLVGNKCDLTLKRL 521
E R + + + ++VGNKCD+ K++
Sbjct: 110 QEICSRRSDLNELPIVVVGNKCDVENKKI 138
>U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical
protein C52B11.5 protein.
Length = 238
Score = 30.7 bits (66), Expect = 0.70
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 297 TIKLQIWDTGG-QERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYACDNV 473
T++L D GG + R +++ Y D +SF +K+ L + R N
Sbjct: 72 TVELIEKDLGGLTNEDNGFKKTEMRDVDAVLLFYAADDLESFKQLKENLVHVQRKIPPNA 131
Query: 474 NKLLVGNKCDL 506
N +VG K D+
Sbjct: 132 NITVVGTKADV 142
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 30.7 bits (66), Expect = 0.70
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1
Query: 166 LLKGDSGVGKSCL*LRFADD 225
L+ G+SGVGKS L LRF DD
Sbjct: 1 LIIGESGVGKSSLMLRFVDD 20
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
+KL++ GD GVGKS L ++F + + Y T+
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTI 50
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
+KL++ GD GVGKS L ++F + + Y T+
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTI 50
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 157 FKLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
FKL+ G+ VGK+ + RF D++ +Y +T+
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATI 44
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 255 GVDFKIRTVDLNGKTIKLQIW 317
G+DF +T+ L +TI+LQIW
Sbjct: 45 GIDFLSKTMYLEDRTIRLQIW 65
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KLLLKGDSGVGKSCL*LRFADDTYTESYISTM 255
K ++ GD VGK+CL + + + + YI T+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 36
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 279 VDLNGKTIKLQIWDTGGQERF 341
V ++G+ I L +WDT GQE +
Sbjct: 44 VMVDGRPINLGLWDTAGQEDY 64
>Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +3
Query: 306 LQIWDTGGQERFKTIT--SSYYRGAHGIIIVYDCTDQDSFSNV---KQWLE 443
L + DT G + I +Y + A ++VY D +SF+ V K+W++
Sbjct: 222 LILHDTAGVSNYGPIELKKAYVQAADAFVLVYSSADYESFNRVDLLKKWID 272
>Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical
protein F52A8.6c protein.
Length = 199
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +3
Query: 306 LQIWDTGGQERFKTIT--SSYYRGAHGIIIVYDCTDQDSFSNV---KQWLE 443
L + DT G + I +Y + A ++VY D +SF+ V K+W++
Sbjct: 57 LILHDTAGVSNYGPIELKKAYVQAADAFVLVYSSADYESFNRVDLLKKWID 107
>Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +3
Query: 306 LQIWDTGGQERFKTIT--SSYYRGAHGIIIVYDCTDQDSFSNV---KQWLE 443
L + DT G + I +Y + A ++VY D +SF+ V K+W++
Sbjct: 222 LILHDTAGVSNYGPIELKKAYVQAADAFVLVYSSADYESFNRVDLLKKWID 272
>AL032654-2|CAA21718.1| 257|Caenorhabditis elegans Hypothetical
protein Y52B11A.2a protein.
Length = 257
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 393 YDCTDQDSFSNVKQWLEEMDRYACDNV 473
+DC D F + LE MDR DNV
Sbjct: 192 HDCVDDGEFGASSKMLELMDRMKADNV 218
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 27.9 bits (59), Expect = 4.9
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 282 DLNGKTIKLQIWDTGGQERFKTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEMDRY 458
D+ + + I D +E + S R A+ I +VY TD+ + ++ +WL + R
Sbjct: 50 DVTPENVTTSIVDLSIKEEDENWIVSEIRQANVICVVYSVTDESTVDGIQTKWL-PLIRQ 108
Query: 459 ACDNVNK---LLVGNKCDLT 509
+ ++ +LVGNK D T
Sbjct: 109 SFGEYHETPVILVGNKSDGT 128
>AF040652-2|AAB95019.1| 221|Caenorhabditis elegans Hypothetical
protein T05A8.2 protein.
Length = 221
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 498 TCSRRAVCSHCHKRNDPSPLTTVSHC*MNPGL 403
+CS VC +C +RN P P+ S + P L
Sbjct: 127 SCSGERVCPYCGRRNCPGPVYIPSQMKIPPKL 158
>Z73102-14|CAA97415.1| 297|Caenorhabditis elegans Hypothetical
protein B0035.13 protein.
Length = 297
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 363 YRGAHGIIIVYDCTDQDSFSNVKQWLE--EMDRYACDNVNKLLVGNKCD 503
+RG G + + + D+ F + QW+ ++ +Y D NKL G D
Sbjct: 97 FRGTQGFLQLIEEADKSVFQSQSQWVAGGKVSKYFGDAFNKLWNGGMKD 145
>U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical
protein C31H1.1 protein.
Length = 693
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 351 TSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEMDRYA 461
++S + G VY+C DS SN+ QW D ++
Sbjct: 480 SASIRKAVEGPKGVYECGSWDSASNISQWSTYSDGHS 516
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,101,826
Number of Sequences: 27780
Number of extensions: 240570
Number of successful extensions: 729
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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