Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0137
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    28   0.25 
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    26   1.3  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    26   1.3  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    23   9.4  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   9.4  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -3

Query: 589 LNIKITRFTTLNNNNNSMRIIYIYFFIHHTDVTNSTLHSAYIY 461
           LN+ +      N++ NS R   + FFI H    +ST ++ ++Y
Sbjct: 339 LNV-VNMCNDFNSDINSWRFYNLIFFIAHLTAMSSTCYNPFLY 380


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 186 DRRCLIISLLFEPAAGVAAQVEAPDLVV 103
           DR CLII   F   A +A    AP ++V
Sbjct: 505 DRLCLIIFTFFTIVATIAVLFSAPHIIV 532


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = -1

Query: 141 GVAAQVEAPDLVVD---EDGQHERNGGQPPHELEWVHPQALVHTG 16
           GV   V AP   +D   EDG H +   +P HEL  +  Q +   G
Sbjct: 266 GVPFYVAAPFTSIDVAIEDGSHIKIEERPEHELTHIGGQRIAAPG 310


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1

Query: 186 DRRCLIISLLFEPAAGVAAQVEAPDLVV 103
           DR CLII  LF   A +A    AP  +V
Sbjct: 481 DRLCLIIFTLFTIIATLAVLFSAPHFIV 508


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +2

Query: 383 FLLLRNVTERTRRALASHYPLYRTMYVYICTVECGVCYVCV 505
           ++LL  + +     L   +P    +  +I TV C V  VC+
Sbjct: 32  YILLTGIMQFVYCCLVGTFPFNSFLAGFISTVSCFVLGVCL 72


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 93  GQHERNGGQPPHELEWV 43
           G   + GG PPH   W+
Sbjct: 248 GSSSKKGGPPPHIYPWM 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,303
Number of Sequences: 2352
Number of extensions: 13812
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)