Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0137
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81028-2|CAB02694.1| 996|Caenorhabditis elegans Hypothetical pr... 95 3e-20
U18546-1|AAB02615.1| 996|Caenorhabditis elegans Na,K-ATPase alp... 95 3e-20
Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical p... 48 5e-06
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 31 1.1
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 31 1.1
Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z48009-4|CAA88084.1| 329|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z81028-2|CAB02694.1| 996|Caenorhabditis elegans Hypothetical protein
B0365.3 protein.
Length = 996
Score = 95.5 bits (227), Expect = 3e-20
Identities = 37/57 (64%), Positives = 46/57 (80%)
Frame = +1
Query: 1 FLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYDEIRRFYLRRNPGGWLEQETYY 171
F+ Y PG+D GLRMY L+F WW A+PF + IF+YDEIRRF +RR PGGW+E+ETYY
Sbjct: 940 FMCYCPGLDNGLRMYGLRFSWWFCALPFSILIFVYDEIRRFLIRRYPGGWVERETYY 996
>U18546-1|AAB02615.1| 996|Caenorhabditis elegans Na,K-ATPase alpha
subunit protein.
Length = 996
Score = 95.5 bits (227), Expect = 3e-20
Identities = 37/57 (64%), Positives = 46/57 (80%)
Frame = +1
Query: 1 FLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYDEIRRFYLRRNPGGWLEQETYY 171
F+ Y PG+D GLRMY L+F WW A+PF + IF+YDEIRRF +RR PGGW+E+ETYY
Sbjct: 940 FMCYCPGLDNGLRMYGLRFSWWFCALPFSILIFVYDEIRRFLIRRYPGGWVERETYY 996
>Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical protein
C01G12.8 protein.
Length = 1049
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +1
Query: 1 FLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYDEIRRFYLRRNPGGWLEQETYY 171
F+ TP +++ L + + A+PF I +YDE+RR+++R PGG++ +ETYY
Sbjct: 993 FVLNTPFVNEVLGVQGFRLEIGFLALPFAFFIGLYDEVRRYFIRTYPGGYIYKETYY 1049
>Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical
protein C01G12.8 protein.
Length = 1049
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +1
Query: 1 FLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYDEIRRFYLRRNPGGWLEQETYY 171
F+ TP +++ L + + A+PF I +YDE+RR+++R PGG++ +ETYY
Sbjct: 993 FVLNTPFVNEVLGVQGFRLEIGFLALPFAFFIGLYDEVRRYFIRTYPGGYIYKETYY 1049
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/94 (26%), Positives = 39/94 (41%)
Frame = -3
Query: 601 LLNHLNIKITRFTTLNNNNNSMRIIYIYFFIHHTDVTNSTLHSAYIYIHSSI*GIV*CES 422
LL H N + +L + N +R +Y F+ + S+L A + S I ++
Sbjct: 1433 LLKHFNCEKETLASLTSFPNILRFLYDQTFMRNAYENTSSLAEAILVKVSRDLAIPTDDT 1492
Query: 421 APRPLGHVAQQKELVTDRRRSAGPCGSRADRCGD 320
P+ H + RRRSA P +D C D
Sbjct: 1493 LMGPVVHQTSSRF----RRRSAQPTWDMSDGCAD 1522
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/94 (26%), Positives = 39/94 (41%)
Frame = -3
Query: 601 LLNHLNIKITRFTTLNNNNNSMRIIYIYFFIHHTDVTNSTLHSAYIYIHSSI*GIV*CES 422
LL H N + +L + N +R +Y F+ + S+L A + S I ++
Sbjct: 1393 LLKHFNCEKETLASLTSFPNILRFLYDQTFMRNAYENTSSLAEAILVKVSRDLAIPTDDT 1452
Query: 421 APRPLGHVAQQKELVTDRRRSAGPCGSRADRCGD 320
P+ H + RRRSA P +D C D
Sbjct: 1453 LMGPVVHQTSSRF----RRRSAQPTWDMSDGCAD 1482
>Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical
protein F45H11.4 protein.
Length = 1243
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 146 AGSNKRLIIKQRRSLSTVVHQLVTAYIMFILCCCIG 253
AGS KR++ K+ R L+T ++T ++ + C +G
Sbjct: 672 AGSKKRILTKKPRFLTTFSQVVITWILVAVQCVIVG 707
>Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical
protein F45H11.4 protein.
Length = 1243
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 146 AGSNKRLIIKQRRSLSTVVHQLVTAYIMFILCCCIG 253
AGS KR++ K+ R L+T ++T ++ + C +G
Sbjct: 672 AGSKKRILTKKPRFLTTFSQVVITWILVAVQCVIVG 707
>Z48009-4|CAA88084.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.6 protein.
Length = 329
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 184 ITVHRRASVSHRVHNVHFVLLYRRTEVAVPFPV 282
+ V+ + S+SHR+ N+ V LY V + FPV
Sbjct: 258 VLVYIQESISHRIFNLLVVWLYAFPIVVLMFPV 290
>AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical
protein C09H5.2a protein.
Length = 1054
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 7 SYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYDEIRRFYLRRNP 141
++ PG+ P + WL + + I+I++E+R+F +R P
Sbjct: 1000 TFVPGVQYVFGSQPPPWECWLVPVIVGIWIWIFNELRKFGIRNYP 1044
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,868,260
Number of Sequences: 27780
Number of extensions: 286896
Number of successful extensions: 858
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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