Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0137
(708 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 28 0.075
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 2.8
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 6.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 6.6
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 28.3 bits (60), Expect = 0.075
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 186 DRRCLIISLLFEPAAGVAAQVEAPDLVV 103
DR CLII LF A +A + AP ++V
Sbjct: 527 DRMCLIIFTLFTIIATIAVLLSAPHIIV 554
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 2.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 64 WLPAIPFMLSIFIYDEIRRFYLRRNPGGW 150
WLP + L IY IRR L GGW
Sbjct: 546 WLPLLRNRLDTLIYPIIRR-KLGSALGGW 573
Score = 22.2 bits (45), Expect = 5.0
Identities = 16/79 (20%), Positives = 35/79 (44%)
Frame = -1
Query: 324 VTSGEKRTRQRLHIHRERHRNLCPPIQQHKMNIMYAVTN*CTTVDSDRRCLIISLLFEPA 145
+ G++R + + ++ N P QH +NI+ + + +DRR +S +
Sbjct: 293 IAGGQQRPDENVVTDKKSKVNFALPELQHNLNILVDMCE-QDIIQNDRRTRHLS---DRV 348
Query: 144 AGVAAQVEAPDLVVDEDGQ 88
+ A+ + V+D+ Q
Sbjct: 349 VALEAEKKNLSKVIDQHSQ 367
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 586 NIKITRFTTLNNNNNSMRIIYIYFFIHHTD 497
N + + NNNNN +Y+ I++ +
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 586 NIKITRFTTLNNNNNSMRIIYIYFFIHHTD 497
N + + NNNNN +Y+ I++ +
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 586 NIKITRFTTLNNNNNSMRIIYIYFFIHHTD 497
N + + NNNNN +Y+ I++ +
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 586 NIKITRFTTLNNNNNSMRIIYIYFFIHHTD 497
N + + NNNNN +Y+ I++ +
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 586 NIKITRFTTLNNNNNSMRIIYIYFFIHHTD 497
N + + NNNNN +Y+ I++ +
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 586 NIKITRFTTLNNNNNSMRIIYIYFFIHHTD 497
N + + NNNNN +Y+ I++ +
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 586 NIKITRFTTLNNNNNSMRIIYIYFFIHHTD 497
N + + NNNNN +Y+ I++ +
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 586 NIKITRFTTLNNNNNSMRIIYIYFFIHHTD 497
N + + NNNNN +Y+ I++ +
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,800
Number of Sequences: 438
Number of extensions: 3962
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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