Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0136
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9Y6X9 Cluster: MORC family CW-type zinc finger protein...    38   0.25 
UniRef50_Q9NR09 Cluster: Baculoviral IAP repeat-containing prote...    35   2.3  
UniRef50_UPI00006CC3BE Cluster: hypothetical protein TTHERM_0059...    34   4.1  
UniRef50_Q38DD4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_Q9Y7K6 Cluster: Sir Antagonist ortholog; n=1; Schizosac...    33   5.4  
UniRef50_Q6UEB3 Cluster: A12 protein; n=1; Pneumocystis murina|R...    33   5.4  
UniRef50_A1ZEF7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q9U5M2 Cluster: FCR3 CSA ligand; n=106; Plasmodium falc...    33   7.2  
UniRef50_A5DT94 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  

>UniRef50_Q9Y6X9 Cluster: MORC family CW-type zinc finger protein 2;
           n=47; Euteleostomi|Rep: MORC family CW-type zinc finger
           protein 2 - Homo sapiens (Human)
          Length = 1032

 Score = 37.9 bits (84), Expect = 0.25
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 KRLPSRQPVRVQNLHEDITTRPKTEKPVQK-TRTKLTSKPLSVSVIYDYPETVYNTKPPA 430
           K  P R    ++ L  ++TTRP TE+PV++  R +    P  +      P ++   +P +
Sbjct: 580 KTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPAS 639

Query: 431 SSEKPFIVYVPQKNPNVIANDISSTS 508
              K  ++    K P + A + +STS
Sbjct: 640 QPRKAPVISSTPKLPALAAREEASTS 665


>UniRef50_Q9NR09 Cluster: Baculoviral IAP repeat-containing protein 6;
            n=41; Eumetazoa|Rep: Baculoviral IAP repeat-containing
            protein 6 - Homo sapiens (Human)
          Length = 4829

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +2

Query: 254  KRLPSRQPVRVQNLHEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPAS 433
            +RLP   P  +Q +   + T    EKP    + +  +   S  ++Y+ PETV    PP  
Sbjct: 4057 ERLPMLYPEVIQQVSAPVVTSTTQEKPKDSDQFEWVTIEQSGELVYEAPETVAAEPPPIK 4116

Query: 434  S 436
            S
Sbjct: 4117 S 4117


>UniRef50_UPI00006CC3BE Cluster: hypothetical protein TTHERM_00591550;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00591550 - Tetrahymena thermophila SB210
          Length = 1065

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 21/88 (23%), Positives = 39/88 (44%)
 Frame = +2

Query: 230  YDTKI*EIKRLPSRQPVRVQNLHEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETV 409
            YDT   +I     +Q    +N H + +   +T     + + K+++  L++     Y    
Sbjct: 868  YDTTQYKINTTSKKQRYNTENHHTETSEFDQTSTSFTQPKYKISNHNLNMMNSPHYFYQT 927

Query: 410  YNTKPPASSEKPFIVYVPQKNPNVIAND 493
              + PPA+S+ P I Y P K    + N+
Sbjct: 928  EGSSPPANSKLPEIKYKPTKKKIELKNN 955


>UniRef50_Q38DD4 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 1059

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 329 KPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEKPFIVYVPQKNPNVIANDISSTS 508
           K  Q T    ++   SVS + +  +TV   + PA S K  I+Y    NP+  +N I + S
Sbjct: 446 KGAQTTSPAESNTQNSVSAVREMDDTV--AQVPAPSRKVSILYSHDGNPDTSSNTIPNDS 503

Query: 509 -CH*RTST 529
            CH RT++
Sbjct: 504 FCHLRTAS 511


>UniRef50_Q9Y7K6 Cluster: Sir Antagonist ortholog; n=1;
           Schizosaccharomyces pombe|Rep: Sir Antagonist ortholog -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 741

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +1

Query: 304 HNDETENGKTCPENTYKTHFEAVVSVCDL 390
           HN +TENG+T PENT  T+  A  +V +L
Sbjct: 434 HNAQTENGQTLPENTDDTNSNATSAVPNL 462


>UniRef50_Q6UEB3 Cluster: A12 protein; n=1; Pneumocystis murina|Rep:
           A12 protein - Pneumocystis murina
          Length = 278

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = +2

Query: 308 TTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEKPFIVYVPQKNPN 478
           T +P T+  V+ T TK TSKP S            +TK  + SEKP +  VP+   N
Sbjct: 197 TEKPSTKPSVKPTSTKTTSKP-STKPSTKPSVKPASTKTTSESEKPTLEEVPETKGN 252


>UniRef50_A1ZEF7 Cluster: Putative uncharacterized protein; n=1;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 210

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 278 VRVQNLHEDITTRPKTEKPVQKT--RTKLTSKPLSVSVIYDYPETVYNTKPPASSEKPFI 451
           + VQ LH++I    KT+K V  T  RT ++S   +  VI     T  N    A+  K F+
Sbjct: 82  IAVQALHDEIKALNKTQKEVNATPQRTTVSSSDTTFKVIIG-SYTTKNFSEFANKHKSFV 140

Query: 452 VYVPQKNP 475
           +  P +NP
Sbjct: 141 I-APYENP 147


>UniRef50_Q9U5M2 Cluster: FCR3 CSA ligand; n=106; Plasmodium
            falciparum|Rep: FCR3 CSA ligand - Plasmodium falciparum
          Length = 3542

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 13/54 (24%), Positives = 31/54 (57%)
 Frame = +2

Query: 263  PSRQPVRVQNLHEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKP 424
            P++QP +V+NL  ++  + +T +  Q+TR + ++   + S +    + + + KP
Sbjct: 2038 PTKQPKKVENLTTEMRAQTRTRRAAQQTRKRTSTATTTESDVGTMVKAILSNKP 2091


>UniRef50_A5DT94 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 584

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
 Frame = +2

Query: 227 YYDTKI*EIKRLPSRQPVR--VQNLHEDITTRPKTEKPVQKTRTKL-TSKPLSVSVIYDY 397
           +  TKI E +     + V+  +Q  HE       T++  QKT++++ T+    + +I ++
Sbjct: 327 FLQTKINETEEAVREERVKLQIQQSHESQQVPYSTDEAAQKTKSEIVTTVKKIIHLISNF 386

Query: 398 -PETVYNTKPPASSEKPFIVYVPQKNPNVIANDISSTSCH*RTST 529
            P T+    PP  +++  I      N N+  N  SSTS +  TST
Sbjct: 387 RPSTLNQAIPPTIAQQADI------NGNITFNSNSSTSTNTSTST 425


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,444,304
Number of Sequences: 1657284
Number of extensions: 11657660
Number of successful extensions: 29662
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29624
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)