Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0136
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     26   0.27 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    26   0.27 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           26   0.27 
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   5.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   5.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.7  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 413 NTKPPASSEKPFIVYVPQKNPNVIAN-DISSTSC 511
           NT+PP +S    +  +    PNV  N D+ S+ C
Sbjct: 117 NTQPPVTSSSNILQNLADITPNVTPNCDVKSSVC 150


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 413 NTKPPASSEKPFIVYVPQKNPNVIAN-DISSTSC 511
           NT+PP +S    +  +    PNV  N D+ S+ C
Sbjct: 117 NTQPPVTSSSNILQNLADITPNVTPNCDVKSSVC 150


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 413 NTKPPASSEKPFIVYVPQKNPNVIAN-DISSTSC 511
           NT+PP +S    +  +    PNV  N D+ S+ C
Sbjct: 117 NTQPPVTSSSNILQNLADITPNVTPNCDVKSSVC 150


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 256 TPSFKAACPSSKSS*RHNDETENGKTCPENTYKT 357
           TP   +  P+S+ S   +D    GK CP   + +
Sbjct: 94  TPGPLSQAPASQQSLDASDPDAMGKWCPRREWSS 127


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 256 TPSFKAACPSSKSS*RHNDETENGKTCPENTYKT 357
           TP   +  P+S+ S   +D    GK CP   + +
Sbjct: 250 TPGPLSQAPASQQSLDASDPDAMGKWCPRREWSS 283


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 395 YPETVYNTKPPASSEKPFIVYVPQKNPNVIA 487
           Y ET+Y+  P    E+  +  +   + NVIA
Sbjct: 220 YNETIYSLTPQGRKEQKVLKSLHSFSNNVIA 250


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 589 NDNGLASFYFFDEQPKTL 642
           N+  L +FYFF+ +  TL
Sbjct: 13  NNTSLDAFYFFETEQFTL 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,059
Number of Sequences: 336
Number of extensions: 3125
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)