Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0136
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    32   0.92 
X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein ...    31   1.6  
AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA...    31   1.6  
Y14998-1|CAB40627.1|  419|Drosophila melanogaster Bip1 protein p...    30   2.8  
AY069281-1|AAL39426.1|  419|Drosophila melanogaster GM13608p pro...    30   2.8  
AJ251944-1|CAB64264.1|  419|Drosophila melanogaster BIP1 protein...    30   2.8  
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA...    30   2.8  
AE014296-1362|AAF50496.1|  419|Drosophila melanogaster CG7574-PA...    30   2.8  
AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-P...    30   2.8  
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    29   4.9  
BT024252-1|ABC86314.1|  358|Drosophila melanogaster IP15869p pro...    29   6.5  
AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p pro...    29   6.5  
AY094954-1|AAM11307.1|  316|Drosophila melanogaster RH70193p pro...    29   6.5  
AY051549-1|AAK92973.1|  316|Drosophila melanogaster GH19706p pro...    29   6.5  
AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB ...    29   6.5  
AE014296-322|AAF47540.1|  316|Drosophila melanogaster CG7967-PA ...    29   6.5  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 31.9 bits (69), Expect = 0.92
 Identities = 22/70 (31%), Positives = 29/70 (41%)
 Frame = +2

Query: 263 PSRQPVRVQNLHEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEK 442
           P+R P R        T  P T KP+    T+L   P S       P T   T+PP +  +
Sbjct: 239 PTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPSPRT---PPPTRPPTRPPTT--R 293

Query: 443 PFIVYVPQKN 472
           P   Y+P  N
Sbjct: 294 PPATYLPPTN 303



 Score = 31.1 bits (67), Expect = 1.6
 Identities = 22/70 (31%), Positives = 28/70 (40%)
 Frame = +2

Query: 263 PSRQPVRVQNLHEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEK 442
           P+R P R        T  P T KP+    T+L   P         P T   TKPP +  +
Sbjct: 282 PTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRT---PPPTRPPTKPPTT--R 336

Query: 443 PFIVYVPQKN 472
           P   Y+P  N
Sbjct: 337 PPATYLPPTN 346


>X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein
            protein.
          Length = 2515

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 296  HEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEKPFIVYVPQKNP 475
            H D    PK  KP +  RT +  +P+++      P        PA +  P +V VP+ NP
Sbjct: 1539 HNDKDREPKKSKPAEPART-VAPQPVALKTPSPVPAEPAPVPKPA-TPVPEVVEVPEINP 1596

Query: 476  NV 481
             V
Sbjct: 1597 TV 1598


>AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA
            protein.
          Length = 2515

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 296  HEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEKPFIVYVPQKNP 475
            H D    PK  KP +  RT +  +P+++      P        PA +  P +V VP+ NP
Sbjct: 1539 HNDKDREPKKSKPAEPART-VAPQPVALKTPSPVPAEPAPVPKPA-TPVPEVVEVPEINP 1596

Query: 476  NV 481
             V
Sbjct: 1597 TV 1598


>Y14998-1|CAB40627.1|  419|Drosophila melanogaster Bip1 protein
           protein.
          Length = 419

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
 Frame = +2

Query: 407 VYNTKPPASSEKPFIVYVPQKNPNVIANDISSTSCH*RTSTLILKMRXPQQSYSLFLTEN 586
           V   KP  ++ +P I   P+KNP   A  I+ST     +S   ++M  P Q+  +  +EN
Sbjct: 304 VTKAKPVVNNPRPHITLPPKKNPTNFAK-ITSTPSSVPSS---IQMPLPIQNTKILKSEN 359

Query: 587 -RMTTA*PLFTFSMNNQKPYLALQLILDGRKLLPKP 691
             +T        ++N    +  L  IL   + LP+P
Sbjct: 360 SELTMNSDEIETNINLSPDFRFLMKILPKLEQLPEP 395


>AY069281-1|AAL39426.1|  419|Drosophila melanogaster GM13608p
           protein.
          Length = 419

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
 Frame = +2

Query: 407 VYNTKPPASSEKPFIVYVPQKNPNVIANDISSTSCH*RTSTLILKMRXPQQSYSLFLTEN 586
           V   KP  ++ +P I   P+KNP   A  I+ST     +S   ++M  P Q+  +  +EN
Sbjct: 304 VAKAKPVVNNPRPHITLPPKKNPTNFAK-ITSTPSSVPSS---IQMPLPIQNTKILKSEN 359

Query: 587 -RMTTA*PLFTFSMNNQKPYLALQLILDGRKLLPKP 691
             +T        ++N    +  L  IL   + LP+P
Sbjct: 360 SELTMNSEEIETNINLSPDFRFLMKILPKLEQLPEP 395


>AJ251944-1|CAB64264.1|  419|Drosophila melanogaster BIP1 protein
           protein.
          Length = 419

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
 Frame = +2

Query: 407 VYNTKPPASSEKPFIVYVPQKNPNVIANDISSTSCH*RTSTLILKMRXPQQSYSLFLTEN 586
           V   KP  ++ +P I   P+KNP   A  I+ST     +S   ++M  P Q+  +  +EN
Sbjct: 304 VTKAKPVVNNPRPHITLPPKKNPTNFAK-ITSTPSSVPSS---IQMPLPIQNTKILKSEN 359

Query: 587 -RMTTA*PLFTFSMNNQKPYLALQLILDGRKLLPKP 691
             +T        ++N    +  L  IL   + LP+P
Sbjct: 360 SELTMNSDEIETNINLSPDFRFLMKILPKLEQLPEP 395


>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
            protein.
          Length = 2112

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = +2

Query: 287  QNLHEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEKPFIVYVPQ 466
            Q+  E  T      KP ++  T+   KP +      YPE    T+ P   +KP     PQ
Sbjct: 1555 QSTDEPTTVTKPITKPTEEPSTEKPQKPTT-----QYPEKPTTTEEPEKPQKPTTTEYPQ 1609

Query: 467  K 469
            K
Sbjct: 1610 K 1610


>AE014296-1362|AAF50496.1|  419|Drosophila melanogaster CG7574-PA
           protein.
          Length = 419

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
 Frame = +2

Query: 407 VYNTKPPASSEKPFIVYVPQKNPNVIANDISSTSCH*RTSTLILKMRXPQQSYSLFLTEN 586
           V   KP  ++ +P I   P+KNP   A  I+ST     +S   ++M  P Q+  +  +EN
Sbjct: 304 VTKAKPVVNNPRPHITLPPKKNPTNFAK-ITSTPSSVPSS---IQMPLPIQNTKILKSEN 359

Query: 587 -RMTTA*PLFTFSMNNQKPYLALQLILDGRKLLPKP 691
             +T        ++N    +  L  IL   + LP+P
Sbjct: 360 SELTMNSDEIETNINLSPDFRFLMKILPKLEQLPEP 395


>AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-PA
            protein.
          Length = 1377

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 20/74 (27%), Positives = 33/74 (44%)
 Frame = +2

Query: 260  LPSRQPVRVQNLHEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSE 439
            L    P ++  L+ D  T P T  P++ T +   S P + ++    P  +    PP   +
Sbjct: 1043 LSEPSPAKIPKLNND--TAPATALPLKSTPS---SAPPTCTLPVAAPPILSGLPPPLVPQ 1097

Query: 440  KPFIVYVPQKNPNV 481
             PFI  + QK P +
Sbjct: 1098 TPFIDRLNQKEPEI 1111


>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 24/90 (26%), Positives = 45/90 (50%)
 Frame = +2

Query: 236  TKI*EIKRLPSRQPVRVQNLHEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYN 415
            T + ++++  +   V +    E  TT PKT+KP QK++ KL   P  V    +  ++++ 
Sbjct: 7985 TVVEDVRKSTNEHTVNIPITFE--TTEPKTKKPKQKSKRKL---PTDVVDFINAEKSIHQ 8039

Query: 416  TKPPASSEKPFIVYVPQKNPNVIANDISST 505
                  + KP IV  P    ++I  D+++T
Sbjct: 8040 ----VIASKPEIVEEP---GSIIVEDVNNT 8062


>BT024252-1|ABC86314.1|  358|Drosophila melanogaster IP15869p
           protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
 Frame = +2

Query: 317 PKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNT-----KPPASSEKP--FIVYVPQKNP 475
           P   +P   ++    S P +  V+    E V N       PP   EKP  F+ YVP   P
Sbjct: 194 PAPYQPEPDSQPPAPSSPTTSGVVPPTAEEVLNNPNKLPSPPVDEEKPGGFVPYVPTAQP 253

Query: 476 N 478
           N
Sbjct: 254 N 254


>AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p
           protein.
          Length = 1168

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +2

Query: 233 DTKI*EIKRLPSRQPVRVQNLHEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVY 412
           DT+  EIKR+   Q VR   + ++  T P ++  ++K   K  S P +  V   +P+   
Sbjct: 244 DTESVEIKRIMDEQVVRSAAILKEAQTVPTSQTQLEKRLMKKGSTPATPPV---HPKPNP 300

Query: 413 NTKP 424
           NT P
Sbjct: 301 NTTP 304


>AY094954-1|AAM11307.1|  316|Drosophila melanogaster RH70193p
           protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
 Frame = +2

Query: 317 PKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNT-----KPPASSEKP--FIVYVPQKNP 475
           P   +P   ++    S P +  V+    E V N       PP   EKP  F+ YVP   P
Sbjct: 194 PAPYQPEPDSQPPAPSSPTTSGVVPPTAEEVLNNPNKLPSPPVDEEKPGGFVPYVPTAQP 253

Query: 476 N 478
           N
Sbjct: 254 N 254


>AY051549-1|AAK92973.1|  316|Drosophila melanogaster GH19706p
           protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
 Frame = +2

Query: 317 PKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNT-----KPPASSEKP--FIVYVPQKNP 475
           P   +P   ++    S P +  V+    E V N       PP   EKP  F+ YVP   P
Sbjct: 194 PAPYQPEPDSQPPAPSSPTTSGVVPPTAEEVLNNPNKLPSPPVDEEKPGGFVPYVPTAQP 253

Query: 476 N 478
           N
Sbjct: 254 N 254


>AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB
           protein.
          Length = 1168

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +2

Query: 233 DTKI*EIKRLPSRQPVRVQNLHEDITTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVY 412
           DT+  EIKR+   Q VR   + ++  T P ++  ++K   K  S P +  V   +P+   
Sbjct: 244 DTESVEIKRIMDEQVVRSAAILKEAQTVPTSQTQLEKRLMKKGSTPATPPV---HPKPNP 300

Query: 413 NTKP 424
           NT P
Sbjct: 301 NTTP 304


>AE014296-322|AAF47540.1|  316|Drosophila melanogaster CG7967-PA
           protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
 Frame = +2

Query: 317 PKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNT-----KPPASSEKP--FIVYVPQKNP 475
           P   +P   ++    S P +  V+    E V N       PP   EKP  F+ YVP   P
Sbjct: 194 PAPYQPEPDSQPPAPSSPTTSGVVPPTAEEVLNNPNKLPSPPVDEEKPGGFVPYVPTAQP 253

Query: 476 N 478
           N
Sbjct: 254 N 254


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,698,548
Number of Sequences: 53049
Number of extensions: 556044
Number of successful extensions: 1496
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1495
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)