Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0136
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 29 3.4
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 29 3.4
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 29 3.4
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 29 4.5
U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +2
Query: 317 PKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEKPFIVYVPQKNPNVIANDI 496
PK KP+ +++++ PL++ + Y E + S E+P + QK P DI
Sbjct: 1644 PKVAKPLDDSKSRVRFAPLNIKLGRTYSEE-QQKELVESLERPLTIITQQKPPEKPTEDI 1702
Query: 497 SSTS 508
+ S
Sbjct: 1703 GALS 1706
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +2
Query: 317 PKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEKPFIVYVPQKNPNVIANDI 496
PK KP+ +++++ PL++ + Y E + S E+P + QK P DI
Sbjct: 1644 PKVAKPLDDSKSRVRFAPLNIKLGRTYSEE-QQKELVESLERPLTIITQQKPPEKPTEDI 1702
Query: 497 SSTS 508
+ S
Sbjct: 1703 GALS 1706
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +2
Query: 317 PKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEKPFIVYVPQKNPNVIANDI 496
PK KP+ +++++ PL++ + Y E + S E+P + QK P DI
Sbjct: 1644 PKVAKPLDDSKSRVRFAPLNIKLGRTYSEE-QQKELVESLERPLTIITQQKPPEKPTEDI 1702
Query: 497 SSTS 508
+ S
Sbjct: 1703 GALS 1706
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 389 YDYPETVYNTKPPASSEKPFIVYVPQKNPN 478
YD+P +N +PP ++ ++ +P+ PN
Sbjct: 299 YDFPPDAFNEEPPKTNPTTGVINLPKIGPN 328
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 389 YDYPETVYNTKPPASSEKPFIVYVPQKNPN 478
YD+P +N +PP ++ ++ +P+ PN
Sbjct: 312 YDFPPDAFNEEPPKTNPTTGVINLPKIGPN 341
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 389 YDYPETVYNTKPPASSEKPFIVYVPQKNPN 478
YD+P +N +PP ++ ++ +P+ PN
Sbjct: 299 YDFPPDAFNEEPPKTNPTTGVINLPKIGPN 328
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 389 YDYPETVYNTKPPASSEKPFIVYVPQKNPN 478
YD+P +N +PP ++ ++ +P+ PN
Sbjct: 312 YDFPPDAFNEEPPKTNPTTGVINLPKIGPN 341
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 308 TTRPKTEKPVQKTRTKLTSKPLSVSVIYDYPETVYNTKPPASSEKP-FIVYVPQKNPN 478
T RPK+ KP KTR K K + + P TV + + + P +++ +KN N
Sbjct: 131 TIRPKSRKPKAKTRGKF-RKTTTAMIQTTTPMTVESFESMEMTTTPKIVIFASKKNMN 187
>U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical
protein T14E8.4 protein.
Length = 475
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +2
Query: 350 TKLTSKPLSVSVIYDYPETVYNTKPPASSEKPFIV--YVPQ----KNPNVIANDISSTS 508
T ++ P+ +VI D N P S++KP +V ++P KNPN + NDI T+
Sbjct: 251 TSQSNGPVIKTVIVDERGAPMNQ--PTSTQKPKVVHKFLPNPYTTKNPNTLKNDIIRTT 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,935,063
Number of Sequences: 27780
Number of extensions: 295788
Number of successful extensions: 842
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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