Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0135
         (583 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.6  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   7.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   7.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   7.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   7.6  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 169 TRRTEVIMSISVTKAPPLPSI 231
           T  T+   ++S T+APP P++
Sbjct: 442 TSTTQRTTTVSTTEAPPAPAV 462


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -1

Query: 319 IKGAEISSRLWERRIVFLRFLWT 251
           +  + + SR+W R       LWT
Sbjct: 528 VDDSSVESRVWPRAAAAAERLWT 550


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 310 AEISSRLWERRIVFLRFLWTK 248
           A + +RLW R       LW++
Sbjct: 529 ASVDTRLWPRAAALGEVLWSE 549


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 124 KLHWPFDCRVGHRC 165
           KL W F  R GH C
Sbjct: 58  KLWWEFCQRNGHNC 71


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 489 ELFILVSNYYCLA*CMAILDARILLSLNI 403
           E+ +LV + YCL       D     SLNI
Sbjct: 282 EIGLLVDSTYCLFLLFVFCDCSHQASLNI 310


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 489 ELFILVSNYYCLA*CMAILDARILLSLNI 403
           E+ +LV + YCL       D     SLNI
Sbjct: 282 EIGLLVDSTYCLFLLFVFCDCSHQASLNI 310


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 489 ELFILVSNYYCLA*CMAILDARILLSLNI 403
           E+ +LV + YCL       D     SLNI
Sbjct: 282 EIGLLVDSTYCLFLLFVFCDCSHQASLNI 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,931
Number of Sequences: 336
Number of extensions: 2751
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)