Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0135
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    27   0.59 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   1.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.5  

>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 26.6 bits (56), Expect = 0.59
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -2

Query: 567 WVICMTPKYVRYFYIGSNNSSLSKKFELFILVSNYY 460
           +++ MT +   + Y+G+  S  + KF  F+  SNY+
Sbjct: 324 YLLVMTSQVFIFCYVGNEISYTTDKFTEFVGFSNYF 359


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 124  FLMHNMRSFFDFEIMNFVRTECH*YRHILKALIK 23
            F   +MR +FDF ++      CH   H+   LI+
Sbjct: 1582 FPQKSMRGYFDFSVLANDSYGCHDRAHVFIYLIR 1615


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -1

Query: 499  KKI*AFYPCLKLLLSGIMYGNIRCADFVISEYKNQGLNEYLTLQLKKILRH 347
            + I A Y  + +++      NI    FVI  ++N+G  EY    L K  R+
Sbjct: 1095 RPIVAAYYIIYIIIIAFFMVNI-FVGFVIVTFQNEGEQEYKNCDLDKNQRN 1144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,787
Number of Sequences: 2352
Number of extensions: 10960
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)