Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0135
         (583 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB038044-1|BAB62394.1|  852|Caenorhabditis elegans N-deacetylase...    29   2.4  
Z73102-13|CAA97405.1|  836|Caenorhabditis elegans Hypothetical p...    27   9.7  

>AB038044-1|BAB62394.1|  852|Caenorhabditis elegans
           N-deacetylase/N-sulfotransferase protein.
          Length = 852

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 570 KWVICMTPKYVRYFYIGSNNSSLSKKFELFILVSNYYC 457
           KW++ +   Y+ Y  + SNNS   K  +   LV NY C
Sbjct: 16  KWILALIFLYLIYICLFSNNSKPPKPRKKPKLVENYTC 53


>Z73102-13|CAA97405.1|  836|Caenorhabditis elegans Hypothetical
           protein B0035.12 protein.
          Length = 836

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 248 NIH*QTIEGNGGALVTEIDIITSVRRVGHR 159
           N+H Q  +    AL ++   +TSVRRV H+
Sbjct: 689 NVHFQATDDELKALFSKFGTVTSVRRVTHK 718


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,424,993
Number of Sequences: 27780
Number of extensions: 237807
Number of successful extensions: 448
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)