Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0134
(707 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B5E30 Cluster: PREDICTED: similar to CG12254-PA... 81 2e-14
UniRef50_UPI0000D55F02 Cluster: PREDICTED: similar to ARC/mediat... 81 3e-14
UniRef50_UPI000051ABBC Cluster: PREDICTED: similar to Mediator c... 72 1e-11
UniRef50_Q9VDR1 Cluster: Mediator of RNA polymerase II transcrip... 61 3e-08
UniRef50_Q6PEH8 Cluster: Mediator of RNA polymerase II transcrip... 61 3e-08
UniRef50_A4IHD9 Cluster: Mediator of RNA polymerase II transcrip... 60 5e-08
UniRef50_UPI0000E45C92 Cluster: PREDICTED: similar to MGC80744 p... 58 3e-07
UniRef50_Q71SY5 Cluster: Mediator of RNA polymerase II transcrip... 57 4e-07
UniRef50_A7SK33 Cluster: Predicted protein; n=1; Nematostella ve... 37 0.42
UniRef50_UPI0000F1F2EB Cluster: PREDICTED: hypothetical protein;... 34 3.0
UniRef50_Q3W1Y5 Cluster: Putative dtdp-4-dehydrorhamnose reducta... 34 3.9
UniRef50_Q4RD72 Cluster: Chromosome undetermined SCAF17258, whol... 33 6.9
UniRef50_Q62IQ9 Cluster: Phosphoglycerate mutase, putative; n=26... 33 9.1
UniRef50_A6W9U7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.1
UniRef50_A7SI71 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.1
>UniRef50_UPI00015B5E30 Cluster: PREDICTED: similar to CG12254-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG12254-PA - Nasonia vitripennis
Length = 937
Score = 81.4 bits (192), Expect = 2e-14
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Frame = +1
Query: 256 SVYAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALT 435
++Y IV Y AADC P YGPF+NP ++ ++K++ IGG ES A I E L TAL
Sbjct: 60 TLYGIVVYHAADCLPAPFTQAYGPFSNPHKLLLTLEKLEMIGGKGESHANIGEGLATALH 119
Query: 436 CFDEF-GR----IDAPMYAVLMCCSPPYSATLEE*FHQEYLRL*SKRPGC*ANEEFSYRY 600
CF++ GR + + VL+C SPPY ++E + + S
Sbjct: 120 CFEDLQGRREPNVATQKHCVLVCNSPPYQIGVQESSKYSGFSV-EQLAALFPENNVSLSI 178
Query: 601 EPPRRIAALNSLYE 642
PR+I+AL L+E
Sbjct: 179 LSPRKISALFKLFE 192
Score = 70.5 bits (165), Expect = 4e-11
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +2
Query: 92 MVANAPETPVQAEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGGALEE 241
MV+ PE +QA++VFVIE+TA NGA++N+ K NYL+PTLEYF G +E+
Sbjct: 1 MVSGPPEHGMQADVVFVIESTATNGAYLNDFKTNYLVPTLEYFSQGGIED 50
>UniRef50_UPI0000D55F02 Cluster: PREDICTED: similar to ARC/mediator
transcriptional coactivator subunit; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to ARC/mediator
transcriptional coactivator subunit - Tribolium
castaneum
Length = 861
Score = 80.6 bits (190), Expect = 3e-14
Identities = 48/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Frame = +1
Query: 256 SVYAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALT 435
S Y IV Y+AADC P GPF +P V+ A+DK++ IGG ES A I E L T L
Sbjct: 60 SYYGIVVYQAADCLPHPSSDTIGPFVSPSKVLNAIDKLELIGGKGESHANIAEGLATTLQ 119
Query: 436 CFDEF-----GRIDAPMYAVLMCCSPPYSATLEE*FHQEYLRL*SKRPGC*ANEEFSYRY 600
CFDE + + +L+C SPPYS + E H + + + +
Sbjct: 120 CFDELQQKRDNNGNIQKHCILVCNSPPYSLGVFE-THAYTGKTAEQLAAILQEKNINLSI 178
Query: 601 EPPRRIAALNSLYE 642
PR+I +L L+E
Sbjct: 179 ISPRKIPSLYKLFE 192
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +2
Query: 92 MVANAPETPVQAEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGGALEEGS 247
MV + +QA+IVFVIE TAVNGA+IN+LK NY+IP+LEYF G+++E S
Sbjct: 1 MVVCPADHGLQADIVFVIEGTAVNGAYINDLKTNYIIPSLEYFSQGSIDESS 52
>UniRef50_UPI000051ABBC Cluster: PREDICTED: similar to Mediator
complex subunit 25 CG12254-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to Mediator complex subunit 25
CG12254-PA - Apis mellifera
Length = 915
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = +2
Query: 80 N*VAMVANAPETPVQAEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGGALEE 241
N V MVA E +QA+++FVIE TAVNGA++N+LK NYL PTLEYF G +E+
Sbjct: 14 NGVKMVAGPTEHGIQADVIFVIEGTAVNGAYLNDLKTNYLTPTLEYFSQGGIED 67
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = +1
Query: 256 SVYAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALT 435
++Y IV Y AADC P +GP+ NP ++ ++K++ +GG E A I E L T L
Sbjct: 78 TLYGIVVYHAADCLPAPCTETFGPYANPHKLLLVLEKLEMVGGKGECFANIGEGLATGLQ 137
Query: 436 CFDEFGRIDAP-----MYAVLMCCSPPYSATLEE 522
CF++ P + +L+C SPPY ++E
Sbjct: 138 CFEDLQLRREPNTAPQKHCILICNSPPYQTVIQE 171
>UniRef50_Q9VDR1 Cluster: Mediator of RNA polymerase II
transcription subunit 25; n=1; Drosophila
melanogaster|Rep: Mediator of RNA polymerase II
transcription subunit 25 - Drosophila melanogaster
(Fruit fly)
Length = 863
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/39 (61%), Positives = 35/39 (89%)
Frame = +2
Query: 125 AEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGGALEE 241
A++VFVIE +A+NGA+INELK NY++PTLE+F G+++E
Sbjct: 9 ADVVFVIEGSAINGAYINELKTNYILPTLEHFTTGSIDE 47
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +1
Query: 250 YCSVYAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTA 429
+ ++Y IV Y+ A S YGPF PQ V+E ++++ +GG ES A + E A
Sbjct: 56 FATLYGIVVYRTAANLLEPVCSTYGPFLQPQKVMETIERLPLVGGGMESCAHMAEGFAAA 115
Query: 430 LTCFDEFG-------RIDAPMYAVLMCCSPPYSATLEE 522
CFD+ + + +L+C SPPY E
Sbjct: 116 HGCFDDISERRQLLDQTSVQRHCILICNSPPYQMPTTE 153
>UniRef50_Q6PEH8 Cluster: Mediator of RNA polymerase II
transcription subunit 25; n=4; Euteleostomi|Rep:
Mediator of RNA polymerase II transcription subunit 25 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 701
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +1
Query: 262 YAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALTCF 441
Y +V + DC P V + P ++ V +D IQF+GG AES + I E L+ AL F
Sbjct: 63 YGLVVFNTVDCAPESYVQCHAPTSSAFEFVSWIDSIQFMGGGAESCSLIAEGLSVALQLF 122
Query: 442 DEFGRI-----DAPMYAVLMCCSPPY 504
D+F ++ VL+C SPPY
Sbjct: 123 DDFKKMREQIGQTHKVCVLLCNSPPY 148
Score = 46.4 bits (105), Expect = 7e-04
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +2
Query: 125 AEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGG 229
+++VFVIE TA G + L+ NY++PT+EYF+GG
Sbjct: 13 SDVVFVIEGTANLGPYFESLRNNYILPTIEYFNGG 47
>UniRef50_A4IHD9 Cluster: Mediator of RNA polymerase II
transcription subunit 25; n=3; Xenopus|Rep: Mediator of
RNA polymerase II transcription subunit 25 - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 805
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 262 YAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALTCF 441
Y++V + DC P V + P ++ V+ +D I+F+GG ES + I E L+TAL F
Sbjct: 63 YSLVVFNTVDCAPESYVQCHAPTSSAYEFVQWLDSIRFMGGGGESCSLIAEGLSTALQLF 122
Query: 442 DEFGRI-----DAPMYAVLMCCSPPY 504
D+F ++ +L+C SPPY
Sbjct: 123 DDFKKMREQIGQTHKVCILICNSPPY 148
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +2
Query: 125 AEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGG 229
+++VFVIE TA G + L+ +YL+P +EYF+GG
Sbjct: 13 SDVVFVIEGTANLGPYFESLRKHYLLPAIEYFNGG 47
>UniRef50_UPI0000E45C92 Cluster: PREDICTED: similar to MGC80744
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to MGC80744 protein,
partial - Strongylocentrotus purpuratus
Length = 274
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Frame = +1
Query: 256 SVYAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALT 435
+V+++V + + DC PG +S P +N + + +DKI FIGG ES + + E L A+
Sbjct: 55 TVFSLVVFNSVDCFPGPAISCTTPTSNAKEFMRTLDKILFIGGGGESHSLLAEGLGGAMQ 114
Query: 436 CFDEF-----GRIDAPMYAVLMCCSPPYSATLEE*FH 531
FD R +L+ SPP+S E H
Sbjct: 115 IFDHMKIRREARTKIDKMCILITNSPPFSIPAMECGH 151
>UniRef50_Q71SY5 Cluster: Mediator of RNA polymerase II
transcription subunit 25; n=29; Mammalia|Rep: Mediator
of RNA polymerase II transcription subunit 25 - Homo
sapiens (Human)
Length = 747
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +1
Query: 262 YAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALTCF 441
Y++V + DC P V + P ++ V +D I+F+GG ES + I E L+TAL F
Sbjct: 66 YSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF 125
Query: 442 DEFGRI-----DAPMYAVLMCCSPPY 504
D+F ++ +L+C SPPY
Sbjct: 126 DDFKKMREQIGQTHRVCLLICNSPPY 151
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 119 VQAEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGG 229
V A++VFVIE TA G + L+ +YL+P +EYF+GG
Sbjct: 14 VVADVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGG 50
>UniRef50_A7SK33 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 855
Score = 37.1 bits (82), Expect = 0.42
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 128 EIVFVIEATAVNGAFINELKVNYLIPTLEYFHGGALEEGS 247
E+VFV+E TA LK Y+ P +EY +GG ++E +
Sbjct: 11 EVVFVVEGTANLLLHFETLKTEYIDPIIEYINGGPVQESN 50
>UniRef50_UPI0000F1F2EB Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 563
Score = 34.3 bits (75), Expect = 3.0
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -2
Query: 664 NRSPAGGSRTRSSAQRCAGAARIDS*TPRSLSILAACSIVAGT 536
+RS G S RSS+ R + +R+ S +PRSLS LAA T
Sbjct: 328 HRSSPGSSSGRSSSPRASPDSRVSSSSPRSLSPLAALETTRAT 370
>UniRef50_Q3W1Y5 Cluster: Putative dtdp-4-dehydrorhamnose reductase;
n=1; Frankia sp. EAN1pec|Rep: Putative
dtdp-4-dehydrorhamnose reductase - Frankia sp. EAN1pec
Length = 345
Score = 33.9 bits (74), Expect = 3.9
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 519 GIVPPGVPATIEQAARMLSERGVQLSIRAAPAHRCAELLVREPPAGERLQA---PQRN 683
G +PPG PA +++ A + R ++ S R PA R PP+ R + P RN
Sbjct: 264 GYLPPGWPAMVDELATAIERRDIEGSSRRLPAPRPGGPEAPAPPSPPRTECTPMPDRN 321
>UniRef50_Q4RD72 Cluster: Chromosome undetermined SCAF17258, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF17258,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 93
Score = 33.1 bits (72), Expect = 6.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 110 ETPVQAEIVFVIEATAVNGAFINELKVNYLIPTLEY 217
ET A+ V VIE TA G + L+ NY++P +EY
Sbjct: 8 ETYQGADGVGVIEGTANLGPYFESLRKNYILPAIEY 43
>UniRef50_Q62IQ9 Cluster: Phosphoglycerate mutase, putative; n=26;
Burkholderiales|Rep: Phosphoglycerate mutase, putative -
Burkholderia mallei (Pseudomonas mallei)
Length = 237
Score = 32.7 bits (71), Expect = 9.1
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 522 IVPPGVPATIEQAARMLSERGVQLSIRAAPAHR 620
++ G+P TIE R+L+E G QL I PA R
Sbjct: 61 VIASGLPRTIETTQRVLAETGQQLDIDIEPAWR 93
>UniRef50_A6W9U7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 415
Score = 32.7 bits (71), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 217 FPWRCSRRRQWYCSVYAIVTYKAADCHPGVP 309
FPW R CSVYA+ + A+ PGVP
Sbjct: 343 FPWSAERTGTSCCSVYALPPARPAERSPGVP 373
>UniRef50_A7SI71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1647
Score = 32.7 bits (71), Expect = 9.1
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 217 FPWRCSRRRQWYCSVYAIVTYKAADCHPGVPVSVYG 324
F W C R Y VY I+T C P V S G
Sbjct: 251 FNWSCRHRLARYVHVYTIITMATVTCQPSVHASYEG 286
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,484,083
Number of Sequences: 1657284
Number of extensions: 14424581
Number of successful extensions: 38937
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 37566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38923
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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