Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0134
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065297-1|AAH65297.1| 747|Homo sapiens mediator complex subuni... 57 5e-08
AY533507-1|AAS45401.1| 796|Homo sapiens ARC/mediator transcript... 57 5e-08
AJ617479-1|CAE84581.1| 754|Homo sapiens activator interaction d... 57 5e-08
AF261072-1|AAM20739.1| 747|Homo sapiens p78 protein. 57 5e-08
AC006942-2|AAD15565.1| 101|Homo sapiens R31181_2, partial prote... 45 3e-04
AL590369-1|CAI14505.1| 431|Homo sapiens chromosome 9 open readi... 30 7.1
AL391056-1|CAI14633.1| 431|Homo sapiens chromosome 9 open readi... 30 7.1
AK125148-1|BAC86063.1| 191|Homo sapiens protein ( Homo sapiens ... 30 7.1
AK093122-1|BAC04063.1| 377|Homo sapiens protein ( Homo sapiens ... 30 7.1
AK127414-1|BAC86967.1| 127|Homo sapiens protein ( Homo sapiens ... 30 9.3
>BC065297-1|AAH65297.1| 747|Homo sapiens mediator complex subunit
25 protein.
Length = 747
Score = 57.2 bits (132), Expect = 5e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +1
Query: 262 YAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALTCF 441
Y++V + DC P V + P ++ V +D I+F+GG ES + I E L+TAL F
Sbjct: 66 YSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF 125
Query: 442 DEFGRI-----DAPMYAVLMCCSPPY 504
D+F ++ +L+C SPPY
Sbjct: 126 DDFKKMREQIGQTHRVCLLICNSPPY 151
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 119 VQAEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGG 229
V A++VFVIE TA G + L+ +YL+P +EYF+GG
Sbjct: 14 VVADVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGG 50
>AY533507-1|AAS45401.1| 796|Homo sapiens ARC/mediator
transcriptional coactivator subunit protein.
Length = 796
Score = 57.2 bits (132), Expect = 5e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +1
Query: 262 YAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALTCF 441
Y++V + DC P V + P ++ V +D I+F+GG ES + I E L+TAL F
Sbjct: 66 YSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF 125
Query: 442 DEFGRI-----DAPMYAVLMCCSPPY 504
D+F ++ +L+C SPPY
Sbjct: 126 DDFKKMREQIGQTHRVCLLICNSPPY 151
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 119 VQAEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGG 229
V A++VFVIE TA G + L+ +YL+P +EYF+GG
Sbjct: 14 VVADVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGG 50
>AJ617479-1|CAE84581.1| 754|Homo sapiens activator interaction
domain 1 protein protein.
Length = 754
Score = 57.2 bits (132), Expect = 5e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +1
Query: 262 YAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALTCF 441
Y++V + DC P V + P ++ V +D I+F+GG ES + I E L+TAL F
Sbjct: 66 YSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF 125
Query: 442 DEFGRI-----DAPMYAVLMCCSPPY 504
D+F ++ +L+C SPPY
Sbjct: 126 DDFKKMREQIGQTHRVCLLICNSPPY 151
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 119 VQAEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGG 229
V A++VFVIE TA G + L+ +YL+P +EYF+GG
Sbjct: 14 VVADVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGG 50
>AF261072-1|AAM20739.1| 747|Homo sapiens p78 protein.
Length = 747
Score = 57.2 bits (132), Expect = 5e-08
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +1
Query: 262 YAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALTCF 441
Y++V + DC P V + P ++ V +D I+F+GG ES + I E L+TAL F
Sbjct: 66 YSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF 125
Query: 442 DEFGRI-----DAPMYAVLMCCSPPY 504
D+F ++ +L+C SPPY
Sbjct: 126 DDFKKMREQIGQTHRVCLLICNSPPY 151
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 119 VQAEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGG 229
V A++V VIE TA G + L+ +YL+P +EYF+GG
Sbjct: 14 VVADVVSVIEGTANLGPYFEGLRKHYLLPAIEYFNGG 50
>AC006942-2|AAD15565.1| 101|Homo sapiens R31181_2, partial protein
protein.
Length = 101
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 119 VQAEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGG 229
V A++VFVIE TA G + L+ +YL+P +EYF+GG
Sbjct: 14 VVADVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGG 50
>AL590369-1|CAI14505.1| 431|Homo sapiens chromosome 9 open reading
frame 50 protein.
Length = 431
Score = 30.3 bits (65), Expect = 7.1
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 519 GIVPPGVPATIEQAARMLSERGVQLSIRAAP---AHRCAELLVREPPAGERLQAPQRNYA 689
G +PP +PA + R + +RG+ S+ P A E R+P GER + P+R A
Sbjct: 74 GRLPPRLPALLTATRRAVRKRGLLRSLLPPPLLSAGASRESAPRQPGPGER-ERPRRRVA 132
>AL391056-1|CAI14633.1| 431|Homo sapiens chromosome 9 open reading
frame 50 protein.
Length = 431
Score = 30.3 bits (65), Expect = 7.1
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 519 GIVPPGVPATIEQAARMLSERGVQLSIRAAP---AHRCAELLVREPPAGERLQAPQRNYA 689
G +PP +PA + R + +RG+ S+ P A E R+P GER + P+R A
Sbjct: 74 GRLPPRLPALLTATRRAVRKRGLLRSLLPPPLLSAGASRESAPRQPGPGER-ERPRRRVA 132
>AK125148-1|BAC86063.1| 191|Homo sapiens protein ( Homo sapiens
cDNA FLJ43158 fis, clone ERLTF2000324. ).
Length = 191
Score = 30.3 bits (65), Expect = 7.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 187 SKLSYTHIRIFPWRCSRRRQWYCSVYAIVTYKAADCHPGVPVSVYGPFNNPQN 345
+K S THIR +CS+R+ W + Y V K + PG G P+N
Sbjct: 22 TKSSETHIRFL--QCSQRQGWQLAGYGQVWRKESSYKPGGRNGKLGTQKGPRN 72
>AK093122-1|BAC04063.1| 377|Homo sapiens protein ( Homo sapiens
cDNA FLJ35803 fis, clone TESTI2005979. ).
Length = 377
Score = 30.3 bits (65), Expect = 7.1
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 519 GIVPPGVPATIEQAARMLSERGVQLSIRAAP---AHRCAELLVREPPAGERLQAPQRNYA 689
G +PP +PA + R + +RG+ S+ P A E R+P GER + P+R A
Sbjct: 74 GRLPPRLPALLTATRRAVRKRGLLRSLLPPPLLSAGASRESAPRQPGPGER-ERPRRRVA 132
>AK127414-1|BAC86967.1| 127|Homo sapiens protein ( Homo sapiens
cDNA FLJ45506 fis, clone BRTHA2020695. ).
Length = 127
Score = 29.9 bits (64), Expect = 9.3
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 376 IGGHAESRACITEALTTALTCFDEFGRIDAPMYAVLMCCSPPYSATLEE*FHQEYL 543
I G +S+ I A++ L CF RI + ++C + Y A L FHQ YL
Sbjct: 69 ISGQRKSKNNIKAAMSIILQCFASLHRI----LSKILCKNNVYLAELSVYFHQPYL 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,887,570
Number of Sequences: 237096
Number of extensions: 2280217
Number of successful extensions: 5093
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5093
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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