Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0134
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069370-1|AAL39515.1|  863|Drosophila melanogaster LD07688p pro...    61   2e-09
AE014297-2741|AAF55729.1|  863|Drosophila melanogaster CG12254-P...    61   2e-09
AY094644-1|AAM10997.1|  421|Drosophila melanogaster AT09290p pro...    30   3.5  
AE014297-1463|AAF54762.1|  421|Drosophila melanogaster CG10014-P...    30   3.5  

>AY069370-1|AAL39515.1|  863|Drosophila melanogaster LD07688p
           protein.
          Length = 863

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 24/39 (61%), Positives = 35/39 (89%)
 Frame = +2

Query: 125 AEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGGALEE 241
           A++VFVIE +A+NGA+INELK NY++PTLE+F  G+++E
Sbjct: 9   ADVVFVIEGSAINGAYINELKTNYILPTLEHFTTGSIDE 47



 Score = 58.8 bits (136), Expect = 7e-09
 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
 Frame = +1

Query: 250 YCSVYAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTA 429
           + ++Y IV Y+ A        S YGPF  PQ V+E ++++  +GG  ES A + E    A
Sbjct: 56  FATLYGIVVYRTAANLLEPVCSTYGPFLQPQKVMETIERLPLVGGGMESCAHMAEGFAAA 115

Query: 430 LTCFDEFG-------RIDAPMYAVLMCCSPPYSATLEE 522
             CFD+         +     + +L+C SPPY     E
Sbjct: 116 HGCFDDISERRQLLDQTSVQRHCILICNSPPYQMPTTE 153


>AE014297-2741|AAF55729.1|  863|Drosophila melanogaster CG12254-PA
           protein.
          Length = 863

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 24/39 (61%), Positives = 35/39 (89%)
 Frame = +2

Query: 125 AEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGGALEE 241
           A++VFVIE +A+NGA+INELK NY++PTLE+F  G+++E
Sbjct: 9   ADVVFVIEGSAINGAYINELKTNYILPTLEHFTTGSIDE 47



 Score = 58.8 bits (136), Expect = 7e-09
 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
 Frame = +1

Query: 250 YCSVYAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTA 429
           + ++Y IV Y+ A        S YGPF  PQ V+E ++++  +GG  ES A + E    A
Sbjct: 56  FATLYGIVVYRTAANLLEPVCSTYGPFLQPQKVMETIERLPLVGGGMESCAHMAEGFAAA 115

Query: 430 LTCFDEFG-------RIDAPMYAVLMCCSPPYSATLEE 522
             CFD+         +     + +L+C SPPY     E
Sbjct: 116 HGCFDDISERRQLLDQTSVQRHCILICNSPPYQMPTTE 153


>AY094644-1|AAM10997.1|  421|Drosophila melanogaster AT09290p
           protein.
          Length = 421

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
 Frame = +3

Query: 495 PTLLCYAGGIVPPGVPATIEQAARMLSERGVQLSI--RAAPAHRCAELLVREPPAGERLQ 668
           PT L  A G VPP  P T    AR  +    +      AA A    E    E PA E   
Sbjct: 299 PTPLPTAPGTVPPSAPGTAPATARTSATAIAEPEAHEEAAEAQPAEEAPAAEAPADEAAP 358

Query: 669 APQRNYA 689
           AP    A
Sbjct: 359 APAEEAA 365


>AE014297-1463|AAF54762.1|  421|Drosophila melanogaster CG10014-PA
           protein.
          Length = 421

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
 Frame = +3

Query: 495 PTLLCYAGGIVPPGVPATIEQAARMLSERGVQLSI--RAAPAHRCAELLVREPPAGERLQ 668
           PT L  A G VPP  P T    AR  +    +      AA A    E    E PA E   
Sbjct: 299 PTPLPTAPGTVPPSAPGTAPATARTSATAIAEPEAHEEAAEAQPAEEAPAAEAPADEAAP 358

Query: 669 APQRNYA 689
           AP    A
Sbjct: 359 APAEEAA 365


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,359,977
Number of Sequences: 53049
Number of extensions: 713120
Number of successful extensions: 1787
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1785
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)