Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0132
         (544 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68317-4|CAA92688.1|  486|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z48544-7|CAA88440.1|  249|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL132876-17|CAC48140.1|  934|Caenorhabditis elegans Hypothetical...    28   3.8  
AC024798-1|AAK29914.3|  722|Caenorhabditis elegans Hypothetical ...    28   3.8  
Z92804-3|CAB07250.1|  492|Caenorhabditis elegans Hypothetical pr...    27   6.6  
AL117195-3|CAB55009.1|  629|Caenorhabditis elegans Hypothetical ...    27   6.6  
AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cycl...    27   6.6  
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z77663-4|CAB01213.1|  605|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.        27   8.7  

>Z68317-4|CAA92688.1|  486|Caenorhabditis elegans Hypothetical
           protein T01H3.4 protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -1

Query: 328 IRSAIYDCLSPAIHISVRAVTSCHHICNRSIHRSDNDTADSLVKPIHPF*TQCLPK 161
           +RS ++ C SP +H+S   +   H   N  ++  + D    + KP  PF   C  K
Sbjct: 92  VRSVLFHCNSPLVHLSTPFLQCSHRWPN--VYEPERDPV--VFKPQWPFPEYCASK 143


>Z48544-7|CAA88440.1|  249|Caenorhabditis elegans Hypothetical
           protein ZK945.7 protein.
          Length = 249

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -2

Query: 201 LNQFTLFRHNVFPKTLDEPTLNKEFVKCDDLFSNLSKILY 82
           +NQF L  ++  PK+    T+N++F +C DL + L   +Y
Sbjct: 74  INQFNLSVYSA-PKSETPVTMNEKFERCKDLMNVLDYSVY 112


>AL132876-17|CAC48140.1|  934|Caenorhabditis elegans Hypothetical
           protein Y105E8A.21 protein.
          Length = 934

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = -2

Query: 159 TLDEPTLNKEFVK---CDDLFSNLSKILYRTDLC 67
           TLD  T NK  VK   CD  ++N   I+Y  D C
Sbjct: 207 TLDAVTKNKGIVKCLVCDKEYTNHMSIIYHIDRC 240


>AC024798-1|AAK29914.3|  722|Caenorhabditis elegans Hypothetical
           protein Y48G9A.10 protein.
          Length = 722

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = -3

Query: 194 NSPFLDTMSSQKP*MNQPLIRNL*NVTIYFQICQKFYIGRIF--VARFGGGLC 42
           NSPFLD  SSQK  ++   I N+ N            +G  F  VA+ G G+C
Sbjct: 626 NSPFLDFFSSQKWLLSTSNIPNMTNSIAEDTSVNNIMLGGSFGAVAQDGYGIC 678


>Z92804-3|CAB07250.1|  492|Caenorhabditis elegans Hypothetical
           protein K05D4.4 protein.
          Length = 492

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +2

Query: 35  LRDIGLLQTSPQRSVLYKIFDRFENRSSHFTN-----SLLRVGSSKVFGKTLCLKRVNWF 199
           LRD+GL +   Q  +L +I ++F++ +SH        S+L  G   V   TL  KR    
Sbjct: 127 LRDLGLGKDLMQEKILLEIEEQFKDINSHLGEEIDLPSVLDRGVGNVINLTLFNKRFE-T 185

Query: 200 NQR 208
           NQR
Sbjct: 186 NQR 188


>AL117195-3|CAB55009.1|  629|Caenorhabditis elegans Hypothetical
           protein Y57A10A.4 protein.
          Length = 629

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 12  FYQPTDIHCGT*ASSKPRHKD 74
           FY+ TD HC +   SKPR K+
Sbjct: 262 FYRKTDHHCRSANDSKPRRKN 282


>AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cyclase
           protein 17 protein.
          Length = 1146

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 244 DCIYGGRMLLPALIYVLLVTSNHILRFEWGTILTQ 348
           D I+G     PALI   L T  +I  FEWG   T+
Sbjct: 89  DVIFGPTCSRPALISSALATYYNIPIFEWGLTSTR 123


>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
           protein F45G2.2a protein.
          Length = 1235

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
 Frame = +2

Query: 14  LSAHRHPLRD--IGLLQTSPQRSVLYKIFDRFENRSSHFTNSLLRVGSSKVFGKTLCLKR 187
           L  ++ PL D  + +L+TS +  VLY++++ ++       +       +K  GK+     
Sbjct: 589 LDKNKDPLNDSAVAILKTSDKEGVLYQLWEEYQTDVDREESEKRGKAQAKKKGKSASFLT 648

Query: 188 VNWFNQRIGSIVI*AMYTTIAYMVAGCYCPH 280
           V+   +   + ++  ++TT  + +  C  P+
Sbjct: 649 VSTMYRESLTSLMTMLHTTHPHFIR-CIIPN 678


>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
            protein F43G9.6 protein.
          Length = 2034

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 238  YYDCIYGGRMLLPALIYVLLVTSNHILRFEWGTILTQ 348
            Y+   YG ++LL  +I V+L+ +  +L   W TIL +
Sbjct: 1992 YFWHYYGLQILLWLIIIVILILTIFVLLHTWPTILAE 2028


>Z77663-4|CAB01213.1|  605|Caenorhabditis elegans Hypothetical
           protein F53F4.4 protein.
          Length = 605

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -3

Query: 413 WCNLTG--TDEDLLPSNIRIKPQCCVRIV 333
           W N  G  TDE LL  ++ +KP+ C  IV
Sbjct: 455 WENTPGNLTDETLLTEDLEVKPKICEGIV 483


>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
          Length = 2034

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 238  YYDCIYGGRMLLPALIYVLLVTSNHILRFEWGTILTQ 348
            Y+   YG ++LL  +I V+L+ +  +L   W TIL +
Sbjct: 1992 YFWHYYGLQILLWLIIIVILILTIFVLLHTWPTILAE 2028


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,631,337
Number of Sequences: 27780
Number of extensions: 299093
Number of successful extensions: 716
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)