Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0131
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0394 - 20342756-20343310,20343400-20343591,20343689-20343925     30   2.0  
06_02_0214 + 13141213-13143741                                         29   3.5  
02_04_0619 - 24481641-24482291,24482426-24482640,24482770-244831...    28   6.2  
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826...    28   8.2  

>06_03_0394 - 20342756-20343310,20343400-20343591,20343689-20343925
          Length = 327

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -1

Query: 284 ISFLSCIQTSSCQIRKGSSSILVAVFEAEQIRIPGVDTDIKRIVAQRI 141
           ++ L+C+  + CQ  K   SI    F A+    PGVDT ++ +VAQ +
Sbjct: 16  LALLACVLLAPCQAAKAGLSIK---FYAKTC--PGVDTIVRSVVAQAV 58


>06_02_0214 + 13141213-13143741
          Length = 842

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 123 ACSSNVNPLCNDPFNIRIDTGNSYLFRLENCD 218
           A S+  N L N  +   +D+G SYL R   CD
Sbjct: 284 AASNTTNALFNMTWQFDVDSGFSYLIRFHFCD 315


>02_04_0619 -
           24481641-24482291,24482426-24482640,24482770-24483154,
           24483170-24483258,24485488-24485622,24485833-24487108
          Length = 916

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 532 NKI*HVRWDNELDLLQQEEAERCEQ 458
           +K+    WDNELDLL +E  E+ E+
Sbjct: 495 DKVDRELWDNELDLLLRESEEQDEE 519


>01_06_1758 -
           39681942-39682030,39682115-39682345,39682643-39682679,
           39683604-39683835,39683937-39684022,39684126-39684218,
           39684302-39684465,39684541-39684702,39684783-39684962,
           39685079-39685515,39685614-39685669
          Length = 588

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 206 EAEQIRIPGVDTDIKRIVAQRIHVRRTRPTIHW 108
           EA+++   G +  I++IVAQ   +R  R T++W
Sbjct: 311 EADRMLDMGFEPQIRKIVAQAWLIRPDRQTLYW 343


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,077,394
Number of Sequences: 37544
Number of extensions: 292666
Number of successful extensions: 748
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)