Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0130
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7S698 Cluster: Putative uncharacterized protein NCU047...    34   3.6  
UniRef50_A2FU14 Cluster: Putative uncharacterized protein; n=1; ...    33   8.2  

>UniRef50_Q7S698 Cluster: Putative uncharacterized protein
           NCU04755.1; n=4; Pezizomycotina|Rep: Putative
           uncharacterized protein NCU04755.1 - Neurospora crassa
          Length = 1015

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = -3

Query: 226 TTPDFVLDGNL*LS*IIFSLRAIKCVQIFNVPN 128
           T+PDFVLD NL  S  +FSL  + CV ++N P+
Sbjct: 250 TSPDFVLDNNLTSSADMFSL-GLLCVSLYNSPH 281


>UniRef50_A2FU14 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 848

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 514 LSIDSQVTYRSWLTSYAYKAIIHLINIQSTNCALLKFV 401
           L I++ +  R ++T Y Y A I+ +NI  T   LL FV
Sbjct: 163 LEIENSLVIRPYMTRYDYDAFINDLNIDGTQSELLDFV 200


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,810,133
Number of Sequences: 1657284
Number of extensions: 12095707
Number of successful extensions: 21995
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21994
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)