Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0130
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.74 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   0.98 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   0.98 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   0.98 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.2  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = -3

Query: 157 KCVQIFNVPNVNFDISDKISIFCDNTWPR*PVFVINDEP*MCKCRFFNR 11
           KC   F  P    DI++ +S  C N      V ++ND    CK  F  R
Sbjct: 285 KCPPGFVGPRCEGDINECLSNPCSNAGTLDCVQLVNDYHCNCKLGFMGR 333


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 523 CLALSIDSQVTYRSWL---TSYAYKAIIHLINIQSTNCAL 413
           CL L++   +T  + L   T Y   A +H+I + + NCAL
Sbjct: 136 CLILAVVFLLTLSALLEGFTLYHTTAYLHIITMINMNCAL 175


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 523 CLALSIDSQVTYRSWL---TSYAYKAIIHLINIQSTNCAL 413
           CL L++   +T  + L   T Y   A +H+I + + NCAL
Sbjct: 136 CLILAVVFLLTLSALLEGFTLYHTTAYLHIITMINMNCAL 175


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 523 CLALSIDSQVTYRSWL---TSYAYKAIIHLINIQSTNCAL 413
           CL L++   +T  + L   T Y   A +H+I + + NCAL
Sbjct: 136 CLILAVVFLLTLSALLEGFTLYHTTAYLHIITMINMNCAL 175


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 181 IIFSLRAIKCV--QIFNVPNVNFDISDKISIFC 89
           ++  L  + C+   IFN+   N  ++D + IFC
Sbjct: 61  VLIDLLIVGCILKHIFNILMKNVTLNDVVFIFC 93


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 623 PRNLLFNPYQN 591
           P NL+FNP QN
Sbjct: 948 PSNLVFNPDQN 958


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,271
Number of Sequences: 336
Number of extensions: 3283
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)