Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0129
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   1.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   1.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   5.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   7.2  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.5  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -1

Query: 553 LYMRIASKQKLRLLLIPGERLIQFASENLVTEILI 449
           +++ +  K++L L+L PG+R  ++    +   ILI
Sbjct: 97  IFVTMVFKERLYLILRPGKRFDEYIYGIIFLSILI 131


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -1

Query: 553 LYMRIASKQKLRLLLIPGERLIQFASENLVTEILI 449
           +++ +  K++L L+L PG+R  ++    +   ILI
Sbjct: 97  IFVTMVFKERLYLILRPGKRFDEYIYGIIFLSILI 131


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 172 WLLEPMDIYNVNAPPTLRYK 113
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 98  SRILELISQGGWRI 139
           + I+EL  +GGW++
Sbjct: 300 NEIVELQKEGGWKV 313


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 415 RNLLSSFTRHRHLVHAGYT 359
           RNLL + TR    V++ YT
Sbjct: 123 RNLLETTTRRLAFVNSAYT 141


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
          transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 44 PLVSPHG*VPPP 79
          P V PH  VPPP
Sbjct: 12 PTVLPHQEVPPP 23


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 50   QEVLPPVNSFPP 15
            QE +PP++  PP
Sbjct: 1772 QETIPPIDEEPP 1783


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 296 LEFERGRQIQPSAMYEYFLYIVEGF 222
           L  +RG +++ SA  + F +  EGF
Sbjct: 586 LLLQRGYRVEYSAASDAFTHCPEGF 610


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 296 LEFERGRQIQPSAMYEYFLYIVEGF 222
           L  +RG +++ SA  + F +  EGF
Sbjct: 819 LLLQRGYRVEYSAASDAFTHCPEGF 843


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 296 LEFERGRQIQPSAMYEYFLYIVEGF 222
           L  +RG +++ SA  + F +  EGF
Sbjct: 819 LLLQRGYRVEYSAASDAFTHCPEGF 843


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 474 SEANWISLSPGISKSLSFCF 533
           SE +WI+L+   ++    CF
Sbjct: 260 SEKSWIALNDDYNRLCHLCF 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,981
Number of Sequences: 336
Number of extensions: 2996
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)