Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0129
         (553 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0393 - 24894170-24894676,24895956-24896627,24897720-248979...    27   7.5  
04_03_1045 - 21972877-21972945,21973191-21973559,21973699-21974136     27   10.0 

>04_04_0393 -
           24894170-24894676,24895956-24896627,24897720-24897956,
           24898852-24899388,24899612-24899662,24900756-24900767
          Length = 671

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 411 TCSARSRGTGTSCTLDTPSPETAPGSCK*VDATPSY 304
           TCSAR++  G   TL T  P +  G+ +  DA  SY
Sbjct: 520 TCSARAKEEGGIDTLGTNDPLSVAGNGRCFDAHISY 555


>04_03_1045 - 21972877-21972945,21973191-21973559,21973699-21974136
          Length = 291

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 351 PAKVYPACTRCLCLVNELSRFRMHCISVFICGWIR 455
           PA V     RC C  +ELS   +  +++  C W+R
Sbjct: 158 PALVDMELDRCKCFFHELSSATLRSLAMESCLWMR 192


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,606,515
Number of Sequences: 37544
Number of extensions: 330277
Number of successful extensions: 805
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)