Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0128
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-1|AAC18056.1|  114|Anopheles gambiae unknown protein pr...    31   0.037
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.79 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   1.8  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   4.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   5.6  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    24   5.6  

>AF042732-1|AAC18056.1|  114|Anopheles gambiae unknown protein
           protein.
          Length = 114

 Score = 31.1 bits (67), Expect = 0.037
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -3

Query: 267 DKTYAFSPSPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDKK-SDFDLTPFRLSR 100
           D+     P P ++N  + TG SGHG +    +G   ++   D      DLT F   R
Sbjct: 45  DENGIVGPHPYYNNLYIATGFSGHGIQQTPAVGRAVSEMIIDGGFRTVDLTRFGFDR 101


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -2

Query: 172 RGNSCRFCARQKKRF*FDAIQAFPLPIIIITASRMRPFL 56
           + N C + +R  + F      + P+P++ +T + MRP++
Sbjct: 864 QNNVCNYASRNDRTFWLST--SAPIPMMPVTENEMRPYI 900


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = +2

Query: 497 SFSSVSALNDAGRRAQDYR--NHHN 565
           +FS++  + DAGRRA+ +R  NH +
Sbjct: 550 TFSAIQRVVDAGRRAKSFRRTNHRD 574


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 285 TKRFLPDKTYAFSPSPGHDNTLLITGLSGHGF 190
           T+R +PD     S   G  +  L   L+GHGF
Sbjct: 890 TRRLIPDINLWVSRKHGEVDFFLTQLLTGHGF 921


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 112 QAFPLPIIIITASRMRPFLQEYLMRRLLHYL 20
           Q   LP++ +  SR+   + EY++  ++ YL
Sbjct: 597 QPVNLPLVGVAVSRVLKCIPEYIIENIVGYL 627


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 237 GHDNTLLITGLSGHGFKFASVLGEIAADFAQDKKSDFD 124
           G  N +L+   S  G ++   +  + +DFAQD+  DFD
Sbjct: 582 GWPNHMLLPKGSPDGIEYDFFV--MVSDFAQDRVEDFD 617


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,399
Number of Sequences: 2352
Number of extensions: 14773
Number of successful extensions: 44
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)